RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CASC1Q6TDU7 716 aa25.28■■□□□ 1.64
LINC01006-201ENST00000333319 FOXD4L1Q9NU39 408 aa25.27■■□□□ 1.64
LINC01006-201ENST00000333319 CIZ1Q9ULV3 898 aaPredicted RBP25.27■■□□□ 1.64
LINC01006-201ENST00000333319 NFAT5O94916 1531 aa25.27■■□□□ 1.64
LINC01006-201ENST00000333319 HDGFL1Q5TGJ6 251 aa25.26■■□□□ 1.63
LINC01006-201ENST00000333319 ADGRL3Q9HAR2 1447 aa25.26■■□□□ 1.63
LINC01006-201ENST00000333319 PDE1AP54750 535 aa25.25■■□□□ 1.63
LINC01006-201ENST00000333319 KCNH5Q8NCM2 988 aa25.25■■□□□ 1.63
LINC01006-201ENST00000333319 OSBPL3Q9H4L5 887 aa25.25■■□□□ 1.63
LINC01006-201ENST00000333319 PNMA6EA0A0J9YXQ4 647 aa25.24■■□□□ 1.63
LINC01006-201ENST00000333319 CEMIPQ8WUJ3 1361 aa25.24■■□□□ 1.63
LINC01006-201ENST00000333319 ATP8B2P98198 1209 aa25.24■■□□□ 1.63
LINC01006-201ENST00000333319 TNPO1Q92973 898 aaKnown RBP25.24■■□□□ 1.63
LINC01006-201ENST00000333319 LGR6Q9HBX8 967 aa25.24■■□□□ 1.63
LINC01006-201ENST00000333319 TRAK2O60296 914 aa25.23■■□□□ 1.63
LINC01006-201ENST00000333319 RABEP1Q15276 862 aa25.23■■□□□ 1.63
LINC01006-201ENST00000333319 PHAXQ9H814 394 aaKnown RBP25.23■■□□□ 1.63
LINC01006-201ENST00000333319 ZNF142P52746 1687 aaPredicted RBP25.23■■□□□ 1.63
LINC01006-201ENST00000333319 RTN4Q9NQC3 1192 aaKnown RBP25.23■■□□□ 1.63
LINC01006-201ENST00000333319 DDX11L8A8MPP1 907 aa25.22■■□□□ 1.63
LINC01006-201ENST00000333319 LRRCC1Q9C099 1032 aa25.22■■□□□ 1.63
LINC01006-201ENST00000333319 LRRFIP2Q9Y608 721 aaKnown RBP25.22■■□□□ 1.63
LINC01006-201ENST00000333319 RAB3GAP1Q15042 981 aa25.21■■□□□ 1.63
LINC01006-201ENST00000333319 LRRC59Q96AG4 307 aaKnown RBP25.21■■□□□ 1.63
LINC01006-201ENST00000333319 USP44Q9H0E7 712 aa25.21■■□□□ 1.63
LINC01006-201ENST00000333319 GZF1Q9H116 711 aaPredicted RBP25.21■■□□□ 1.63
LINC01006-201ENST00000333319 PLEKHG5O94827 1062 aa25.2■■□□□ 1.63
LINC01006-201ENST00000333319 EIF2S2P20042 333 aaKnown RBP25.2■■□□□ 1.63
LINC01006-201ENST00000333319 EIF4A1P60842 406 aaKnown RBP25.19■■□□□ 1.62
LINC01006-201ENST00000333319 XPCQ01831 940 aaPredicted RBP25.19■■□□□ 1.62
LINC01006-201ENST00000333319 TSHZ3Q63HK5 1081 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 ORAI2Q96SN7 254 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 PXDNLA1KZ92 1463 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 RGPD2P0DJD1 1756 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 REC8O95072 547 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 UBTFL1P0CB47 393 aaPredicted RBP25.18■■□□□ 1.62
LINC01006-201ENST00000333319 SALL3Q9BXA9 1300 aa25.17■■□□□ 1.62
LINC01006-201ENST00000333319 ERC2O15083 957 aa25.17■■□□□ 1.62
LINC01006-201ENST00000333319 L1TD1Q5T7N2 865 aaKnown RBP25.17■■□□□ 1.62
LINC01006-201ENST00000333319 ZNF530Q6P9A1 599 aaPredicted RBP25.17■■□□□ 1.62
LINC01006-201ENST00000333319 N4BP2Q86UW6 1770 aaPredicted RBP25.17■■□□□ 1.62
LINC01006-201ENST00000333319 IBTKQ9P2D0 1353 aaPredicted RBP25.17■■□□□ 1.62
LINC01006-201ENST00000333319 GCP02774 474 aa25.16■■□□□ 1.62
LINC01006-201ENST00000333319 GBP4Q96PP9 640 aa25.16■■□□□ 1.62
LINC01006-201ENST00000333319 MX1P20591 662 aa25.16■■□□□ 1.62
LINC01006-201ENST00000333319 AKAP4Q5JQC9 854 aa25.16■■□□□ 1.62
LINC01006-201ENST00000333319 KCNQ3O43525 872 aa25.15■■□□□ 1.62
LINC01006-201ENST00000333319 TEFQ10587 303 aa25.15■■□□□ 1.62
LINC01006-201ENST00000333319 MED1Q15648 1581 aaPredicted RBP25.15■■□□□ 1.62
LINC01006-201ENST00000333319 NPHP4O75161 1426 aaPredicted RBP25.15■■□□□ 1.62
LINC01006-201ENST00000333319 PLEKHO1Q53GL0 409 aaPredicted RBP25.15■■□□□ 1.62
LINC01006-201ENST00000333319 LMOD2Q6P5Q4 547 aa25.15■■□□□ 1.62
LINC01006-201ENST00000333319 MPRIPQ6WCQ1 1025 aa25.15■■□□□ 1.62
LINC01006-201ENST00000333319 SRCIN1Q9C0H9 1055 aa25.14■■□□□ 1.62
LINC01006-201ENST00000333319 CHPF2Q9P2E5 772 aa25.14■■□□□ 1.62
LINC01006-201ENST00000333319 ARHGEF25Q86VW2 580 aa25.14■■□□□ 1.61
LINC01006-201ENST00000333319 PHRF1Q9P1Y6 1649 aaKnown RBP25.13■■□□□ 1.61
LINC01006-201ENST00000333319 BTBD11A6QL63 1104 aa25.13■■□□□ 1.61
LINC01006-201ENST00000333319 HOXB7P09629 217 aa25.13■■□□□ 1.61
LINC01006-201ENST00000333319 ARXQ96QS3 562 aa25.12■■□□□ 1.61
LINC01006-201ENST00000333319 KDM3BQ7LBC6 1761 aa25.12■■□□□ 1.61
LINC01006-201ENST00000333319 GOLGA6L3A6NEY3 463 aa25.12■■□□□ 1.61
LINC01006-201ENST00000333319 AMOTQ4VCS5 1084 aa25.11■■□□□ 1.61
LINC01006-201ENST00000333319 SSH3Q8TE77 659 aa25.11■■□□□ 1.61
LINC01006-201ENST00000333319 LMO7Q8WWI1 1683 aa25.11■■□□□ 1.61
LINC01006-201ENST00000333319 SSFA2P28290 1259 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 ADAMTSL3P82987 1691 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 FSD2A1L4K1 749 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 PI4KAP2A4QPH2 592 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 ST18O60284 1047 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 PPP1R42Q7Z4L9 355 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 PI4KAP1Q8N8J0 262 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 CHMP4AQ9BY43 222 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 TRIM6-TRIM34B2RNG4 842 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 C1orf141Q5JVX7 400 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 ANKRD24Q8TF21 1146 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 RILPL2Q969X0 211 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 STAP2Q9UGK3 403 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 TUBGCP6Q96RT7 1819 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 RNMTO43148 476 aaKnown RBP25.09■■□□□ 1.61
LINC01006-201ENST00000333319 ANXA1P04083 346 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 DNAAF4Q8WXU2 420 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 IL1RAPL2Q9NP60 686 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 NBPF7P0C2Y1 421 aaPredicted RBP25.07■■□□□ 1.6
LINC01006-201ENST00000333319 BEND3Q5T5X7 828 aa25.07■■□□□ 1.6
LINC01006-201ENST00000333319 ESYT1Q9BSJ8 1104 aa25.07■■□□□ 1.6
LINC01006-201ENST00000333319 SLIT3O75094 1523 aa25.07■■□□□ 1.6
LINC01006-201ENST00000333319 PXDNQ92626 1479 aa25.07■■□□□ 1.6
LINC01006-201ENST00000333319 SURF6O75683 361 aaKnown RBP25.06■■□□□ 1.6
LINC01006-201ENST00000333319 AK9Q5TCS8 1911 aa25.06■■□□□ 1.6
LINC01006-201ENST00000333319 POLA2Q14181 598 aa25.06■■□□□ 1.6
LINC01006-201ENST00000333319 AXIN2Q9Y2T1 843 aa25.06■■□□□ 1.6
LINC01006-201ENST00000333319 XRCC6P12956 609 aaKnown RBP eCLIP25.05■■□□□ 1.6
LINC01006-201ENST00000333319 CHMLP26374 656 aa25.05■■□□□ 1.6
LINC01006-201ENST00000333319 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
LINC01006-201ENST00000333319 SRGAP3O43295 1099 aa25.05■■□□□ 1.6
LINC01006-201ENST00000333319 RAB11FIP3O75154 756 aa25.05■■□□□ 1.6
LINC01006-201ENST00000333319 NCAPD2Q15021 1401 aa25.04■■□□□ 1.6
LINC01006-201ENST00000333319 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
LINC01006-201ENST00000333319 NUTM1Q86Y26 1132 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms