RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PRKCSHP14314 528 aaPredicted RBP19.05■□□□□ 0.64
PTCH1-201ENST00000331920 AACSQ86V21 672 aa19.04■□□□□ 0.64
PTCH1-201ENST00000331920 ABCF2Q9UG63 623 aa19.04■□□□□ 0.64
PTCH1-201ENST00000331920 SYCE3A1L190 88 aa19.04■□□□□ 0.64
PTCH1-201ENST00000331920 CABP4P57796 275 aa19.04■□□□□ 0.64
PTCH1-201ENST00000331920 ZSCAN25Q6NSZ9 544 aa19.04■□□□□ 0.64
PTCH1-201ENST00000331920 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
PTCH1-201ENST00000331920 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
PTCH1-201ENST00000331920 SPECC1LQ69YQ0 1117 aa19.03■□□□□ 0.64
PTCH1-201ENST00000331920 BLOC1S2Q6QNY1 142 aa19.03■□□□□ 0.64
PTCH1-201ENST00000331920 CRACR2BQ8N4Y2 399 aaPredicted RBP19.03■□□□□ 0.64
PTCH1-201ENST00000331920 USP47Q96K76 1375 aa19.03■□□□□ 0.64
PTCH1-201ENST00000331920 PAFAH1B1P43034 410 aa19.03■□□□□ 0.64
PTCH1-201ENST00000331920 MINDY4BA8MYZ0 360 aa19.03■□□□□ 0.64
PTCH1-201ENST00000331920 IDH1O75874 414 aaKnown RBP19.03■□□□□ 0.64
PTCH1-201ENST00000331920 NOB1Q9ULX3 412 aaKnown RBP19.03■□□□□ 0.64
PTCH1-201ENST00000331920 ZBTB9Q96C00 473 aa19.02■□□□□ 0.64
PTCH1-201ENST00000331920 NLRP6P59044 892 aa19.02■□□□□ 0.63
PTCH1-201ENST00000331920 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.63
PTCH1-201ENST00000331920 CASTP20810 708 aaKnown RBP19.02■□□□□ 0.63
PTCH1-201ENST00000331920 MNAT1P51948 309 aa19.01■□□□□ 0.63
PTCH1-201ENST00000331920 CCDC82Q8N4S0 544 aa19.01■□□□□ 0.63
PTCH1-201ENST00000331920 K7ELQ4 463 aaPredicted RBP19.01■□□□□ 0.63
PTCH1-201ENST00000331920 POLR3DP05423 398 aaPredicted RBP19.01■□□□□ 0.63
PTCH1-201ENST00000331920 CABP2Q9NPB3 220 aa19.01■□□□□ 0.63
PTCH1-201ENST00000331920 SFPQP23246 707 aaKnown RBP eCLIP19.01■□□□□ 0.63
PTCH1-201ENST00000331920 MAP3K11Q16584 847 aa19.01■□□□□ 0.63
PTCH1-201ENST00000331920 TOP1P11387 765 aaKnown RBP19.01■□□□□ 0.63
PTCH1-201ENST00000331920 CCDC63Q8NA47 563 aa19.01■□□□□ 0.63
PTCH1-201ENST00000331920 SREK1Q8WXA9 508 aaKnown RBP19.01■□□□□ 0.63
PTCH1-201ENST00000331920 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
PTCH1-201ENST00000331920 NDC80O14777 642 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 ODF2LQ9ULJ1 636 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 ZSCAN12O43309 604 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 KIF18AQ8NI77 898 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 PRC1O43663 620 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 GUCY1B3Q02153 619 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 ZMYND15Q9H091 742 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 TCERG1LQ5VWI1 586 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 FERMT1Q9BQL6 677 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 TMOD2Q9NZR1 351 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 USO1O60763 962 aaKnown RBP19■□□□□ 0.63
PTCH1-201ENST00000331920 SEPT6Q14141 434 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 SMARCC1Q92922 1105 aaPredicted RBP19■□□□□ 0.63
PTCH1-201ENST00000331920 MKNK2Q9HBH9 465 aa19■□□□□ 0.63
PTCH1-201ENST00000331920 PDZRN3Q9UPQ7 1066 aa18.99■□□□□ 0.63
PTCH1-201ENST00000331920 MAP3K9P80192 1104 aa18.99■□□□□ 0.63
PTCH1-201ENST00000331920 ESCO1Q5FWF5 840 aa18.99■□□□□ 0.63
PTCH1-201ENST00000331920 SYNCQ9H7C4 482 aa18.99■□□□□ 0.63
PTCH1-201ENST00000331920 MAP7D1Q3KQU3 841 aa18.99■□□□□ 0.63
PTCH1-201ENST00000331920 WASF1Q92558 559 aa18.99■□□□□ 0.63
PTCH1-201ENST00000331920 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
PTCH1-201ENST00000331920 SYCP3Q8IZU3 236 aa18.98■□□□□ 0.63
PTCH1-201ENST00000331920 JADE2Q9NQC1 790 aa18.98■□□□□ 0.63
PTCH1-201ENST00000331920 AIDAQ96BJ3 306 aa18.98■□□□□ 0.63
PTCH1-201ENST00000331920 ZHX1Q9UKY1 873 aaPredicted RBP18.98■□□□□ 0.63
PTCH1-201ENST00000331920 SLC4A8Q2Y0W8 1093 aa18.98■□□□□ 0.63
PTCH1-201ENST00000331920 BCAR3O75815 825 aa18.97■□□□□ 0.63
PTCH1-201ENST00000331920 PRKRIP1Q9H875 184 aaPredicted RBP18.97■□□□□ 0.63
PTCH1-201ENST00000331920 NOL3O60936 208 aaKnown RBP18.97■□□□□ 0.63
PTCH1-201ENST00000331920 CALCOCO1Q9P1Z2 691 aa18.97■□□□□ 0.63
PTCH1-201ENST00000331920 SAMM50Q9Y512 469 aa18.97■□□□□ 0.63
PTCH1-201ENST00000331920 WDHD1O75717 1129 aaPredicted RBP18.97■□□□□ 0.63
PTCH1-201ENST00000331920 RPUSD2Q8IZ73 545 aaKnown RBP18.97■□□□□ 0.63
PTCH1-201ENST00000331920 RRP9O43818 475 aaKnown RBP18.96■□□□□ 0.63
PTCH1-201ENST00000331920 CUL5Q93034 780 aa18.96■□□□□ 0.63
PTCH1-201ENST00000331920 IQCGQ9H095 443 aaKnown RBP18.96■□□□□ 0.63
PTCH1-201ENST00000331920 MYO1BO43795 1136 aa18.96■□□□□ 0.63
PTCH1-201ENST00000331920 CEP112Q8N8E3 955 aa18.96■□□□□ 0.63
PTCH1-201ENST00000331920 C16orf45Q96MC5 204 aaPredicted RBP18.96■□□□□ 0.63
PTCH1-201ENST00000331920 NAA15Q9BXJ9 866 aaKnown RBP18.96■□□□□ 0.63
PTCH1-201ENST00000331920 ZSWIM4Q9H7M6 989 aa18.96■□□□□ 0.63
PTCH1-201ENST00000331920 FGFR1OPO95684 399 aaKnown RBP18.96■□□□□ 0.63
PTCH1-201ENST00000331920 ACTN2P35609 894 aa18.96■□□□□ 0.63
PTCH1-201ENST00000331920 ALS2CR12Q96Q35 445 aa18.96■□□□□ 0.63
PTCH1-201ENST00000331920 PLEKHO1Q53GL0 409 aaPredicted RBP18.96■□□□□ 0.62
PTCH1-201ENST00000331920 ISM2Q6H9L7 571 aa18.96■□□□□ 0.62
PTCH1-201ENST00000331920 SATB1Q01826 763 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 SMC1BQ8NDV3 1235 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 NAA25Q14CX7 972 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 TOM1L2Q6ZVM7 507 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 ANAPC4Q9UJX5 808 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 HDGFL1Q5TGJ6 251 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 ANKIB1Q9P2G1 1089 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 CLIP2Q9UDT6 1046 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 CCDC144CPQ8IYA2 1237 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 BICD1Q96G01 975 aa18.95■□□□□ 0.62
PTCH1-201ENST00000331920 LRSAM1Q6UWE0 723 aa18.94■□□□□ 0.62
PTCH1-201ENST00000331920 DNAAF4Q8WXU2 420 aa18.94■□□□□ 0.62
PTCH1-201ENST00000331920 HYPKQ9NX55 129 aa18.94■□□□□ 0.62
PTCH1-201ENST00000331920 MTIF2P46199 727 aaKnown RBP18.94■□□□□ 0.62
PTCH1-201ENST00000331920 GTF2A1P52655 376 aaPredicted RBP18.94■□□□□ 0.62
PTCH1-201ENST00000331920 MIA2Q96PC5 1412 aa18.94■□□□□ 0.62
PTCH1-201ENST00000331920 SLU7O95391 586 aaKnown RBP18.94■□□□□ 0.62
PTCH1-201ENST00000331920 DPH6Q7L8W6 267 aa18.94■□□□□ 0.62
PTCH1-201ENST00000331920 HSF2BPO75031 334 aa18.93■□□□□ 0.62
PTCH1-201ENST00000331920 FERMT3Q86UX7 667 aa18.93■□□□□ 0.62
PTCH1-201ENST00000331920 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
PTCH1-201ENST00000331920 KIF20AO95235 890 aa18.93■□□□□ 0.62
PTCH1-201ENST00000331920 PIP4K2BP78356 416 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms