RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 HMGB2P26583 209 aaKnown RBP12.29□□□□□ -0.44
C11orf54-201ENST00000331239 ANP32EQ9BTT0 268 aa12.29□□□□□ -0.44
C11orf54-201ENST00000331239 KDM3BQ7LBC6 1761 aa12.29□□□□□ -0.44
C11orf54-201ENST00000331239 TEFQ10587 303 aa12.28□□□□□ -0.44
C11orf54-201ENST00000331239 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
C11orf54-201ENST00000331239 SLC52A2Q9HAB3 445 aa12.28□□□□□ -0.44
C11orf54-201ENST00000331239 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
C11orf54-201ENST00000331239 HOXB7P09629 217 aa12.28□□□□□ -0.44
C11orf54-201ENST00000331239 USP35Q9P2H5 1018 aa12.27□□□□□ -0.45
C11orf54-201ENST00000331239 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
C11orf54-201ENST00000331239 RXRBP28702 533 aa12.26□□□□□ -0.45
C11orf54-201ENST00000331239 RNF123Q5XPI4 1314 aa12.26□□□□□ -0.45
C11orf54-201ENST00000331239 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
C11orf54-201ENST00000331239 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
C11orf54-201ENST00000331239 B4GALNT3Q6L9W6 998 aa12.26□□□□□ -0.45
C11orf54-201ENST00000331239 MCM10Q7L590 875 aa12.26□□□□□ -0.45
C11orf54-201ENST00000331239 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
C11orf54-201ENST00000331239 ITGB4P16144 1822 aa12.25□□□□□ -0.45
C11orf54-201ENST00000331239 MPRIPQ6WCQ1 1025 aa12.25□□□□□ -0.45
C11orf54-201ENST00000331239 CABP4P57796 275 aa12.25□□□□□ -0.45
C11orf54-201ENST00000331239 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
C11orf54-201ENST00000331239 LGR6Q9HBX8 967 aa12.25□□□□□ -0.45
C11orf54-201ENST00000331239 FANCIQ9NVI1 1328 aa12.24□□□□□ -0.45
C11orf54-201ENST00000331239 DDX54Q8TDD1 881 aaKnown RBP12.24□□□□□ -0.45
C11orf54-201ENST00000331239 SALL2Q9Y467 1007 aaPredicted RBP12.24□□□□□ -0.45
C11orf54-201ENST00000331239 CICQ96RK0 1608 aaPredicted RBP12.24□□□□□ -0.45
C11orf54-201ENST00000331239 TOGARAM1Q9Y4F4 1720 aa12.24□□□□□ -0.45
C11orf54-201ENST00000331239 UBR2Q8IWV8 1755 aa12.24□□□□□ -0.45
C11orf54-201ENST00000331239 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
C11orf54-201ENST00000331239 MARCH10Q8NA82 808 aaPredicted RBP12.24□□□□□ -0.45
C11orf54-201ENST00000331239 HEG1Q9ULI3 1381 aa12.23□□□□□ -0.45
C11orf54-201ENST00000331239 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
C11orf54-201ENST00000331239 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
C11orf54-201ENST00000331239 BTBD11A6QL63 1104 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 TSPYL4Q9UJ04 414 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 DCTN1Q14203 1278 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 ALDH1L2Q3SY69 923 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 FAM196AQ6ZSG2 479 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
C11orf54-201ENST00000331239 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 DOT1LQ8TEK3 1739 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 SBF2Q86WG5 1849 aa12.22□□□□□ -0.45
C11orf54-201ENST00000331239 RGS17Q9UGC6 210 aaPredicted RBP12.21□□□□□ -0.45
C11orf54-201ENST00000331239 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.45
C11orf54-201ENST00000331239 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
C11orf54-201ENST00000331239 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.45
C11orf54-201ENST00000331239 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
C11orf54-201ENST00000331239 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
C11orf54-201ENST00000331239 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
C11orf54-201ENST00000331239 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
C11orf54-201ENST00000331239 EIF4A1P60842 406 aaKnown RBP12.2□□□□□ -0.46
C11orf54-201ENST00000331239 TTC5Q8N0Z6 440 aa12.19□□□□□ -0.46
C11orf54-201ENST00000331239 ERBB4Q15303 1308 aa12.19□□□□□ -0.46
C11orf54-201ENST00000331239 SENP3-EIF4A1A0A087X0R7 540 aa12.19□□□□□ -0.46
C11orf54-201ENST00000331239 FMNL2Q96PY5 1086 aa12.19□□□□□ -0.46
C11orf54-201ENST00000331239 LAMB4A4D0S4 1761 aa12.18□□□□□ -0.46
C11orf54-201ENST00000331239 EXOSC9Q06265 439 aaKnown RBP12.18□□□□□ -0.46
C11orf54-201ENST00000331239 RCAN3Q9UKA8 241 aa12.18□□□□□ -0.46
C11orf54-201ENST00000331239 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
C11orf54-201ENST00000331239 VAMP4O75379 141 aa12.17□□□□□ -0.46
C11orf54-201ENST00000331239 PIGBQ92521 554 aa12.17□□□□□ -0.46
C11orf54-201ENST00000331239 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
C11orf54-201ENST00000331239 KCPQ6ZWJ8 1503 aa12.17□□□□□ -0.46
C11orf54-201ENST00000331239 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
C11orf54-201ENST00000331239 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
C11orf54-201ENST00000331239 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
C11orf54-201ENST00000331239 RGPD3A6NKT7 1758 aaPredicted RBP12.17□□□□□ -0.46
C11orf54-201ENST00000331239 RGPD4Q7Z3J3 1758 aa12.17□□□□□ -0.46
C11orf54-201ENST00000331239 RGS12O14924 1447 aa12.17□□□□□ -0.46
C11orf54-201ENST00000331239 A0A0G2JS52 829 aa12.16□□□□□ -0.46
C11orf54-201ENST00000331239 MS4A1P11836 297 aa12.16□□□□□ -0.46
C11orf54-201ENST00000331239 POTEAQ6S8J7 498 aa12.16□□□□□ -0.46
C11orf54-201ENST00000331239 TSR2Q969E8 191 aaKnown RBP12.16□□□□□ -0.46
C11orf54-201ENST00000331239 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
C11orf54-201ENST00000331239 CCDC30Q5VVM6 783 aa12.16□□□□□ -0.46
C11orf54-201ENST00000331239 GIGYF1O75420 1035 aaPredicted RBP12.15□□□□□ -0.46
C11orf54-201ENST00000331239 ARHGAP45Q92619 1136 aa12.15□□□□□ -0.46
C11orf54-201ENST00000331239 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
C11orf54-201ENST00000331239 MSH5O43196 834 aa12.15□□□□□ -0.46
C11orf54-201ENST00000331239 RARSP54136 660 aaKnown RBP12.15□□□□□ -0.46
C11orf54-201ENST00000331239 BTAF1O14981 1849 aa12.15□□□□□ -0.47
C11orf54-201ENST00000331239 C8orf58Q8NAV2 365 aa12.14□□□□□ -0.47
C11orf54-201ENST00000331239 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
C11orf54-201ENST00000331239 LY75O60449 1722 aa12.14□□□□□ -0.47
C11orf54-201ENST00000331239 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
C11orf54-201ENST00000331239 IPO8O15397 1037 aaKnown RBP12.14□□□□□ -0.47
C11orf54-201ENST00000331239 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
C11orf54-201ENST00000331239 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
C11orf54-201ENST00000331239 IBTKQ9P2D0 1353 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-201ENST00000331239 STK31Q9BXU1 1019 aa12.12□□□□□ -0.47
C11orf54-201ENST00000331239 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
C11orf54-201ENST00000331239 RGL2O15211 777 aa12.12□□□□□ -0.47
C11orf54-201ENST00000331239 CCDC125Q86Z20 511 aa12.12□□□□□ -0.47
C11orf54-201ENST00000331239 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
C11orf54-201ENST00000331239 PTPRCP08575 1304 aa12.12□□□□□ -0.47
C11orf54-201ENST00000331239 C5P01031 1676 aa12.12□□□□□ -0.47
C11orf54-201ENST00000331239 RREB1Q92766 1687 aa12.12□□□□□ -0.47
C11orf54-201ENST00000331239 STARD3NLO95772 234 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms