RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 HAP1P54257 671 aaPredicted RBP21.29■■□□□ 1
PTP4A3-201ENST00000329397 CLEC17AQ6ZS10 378 aa21.29■■□□□ 1
PTP4A3-201ENST00000329397 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
PTP4A3-201ENST00000329397 TECPR2O15040 1411 aa21.29■■□□□ 1
PTP4A3-201ENST00000329397 PTMSP20962 102 aa21.28■■□□□ 1
PTP4A3-201ENST00000329397 GPT2Q8TD30 523 aa21.28■■□□□ 1
PTP4A3-201ENST00000329397 EYA1Q99502 592 aa21.28■■□□□ 1
PTP4A3-201ENST00000329397 TRIM6-TRIM34B2RNG4 842 aa21.28■■□□□ 1
PTP4A3-201ENST00000329397 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
PTP4A3-201ENST00000329397 AMPHP49418 695 aa21.27■■□□□ 1
PTP4A3-201ENST00000329397 GNAI2P04899 355 aa21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 UNC5CLQ8IV45 518 aa21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 CEP170BQ9Y4F5 1589 aaPredicted RBP21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 TMEM2Q9UHN6 1383 aa21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 PRIM1P49642 420 aaKnown RBP21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 RBSNQ9H1K0 784 aa21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 ANO2Q9NQ90 1003 aa21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 ADAMTS13Q76LX8 1427 aa21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 TNRQ92752 1358 aa21.26■□□□□ 0.99
PTP4A3-201ENST00000329397 FLIIQ13045 1269 aa21.25■□□□□ 0.99
PTP4A3-201ENST00000329397 STK31Q9BXU1 1019 aa21.25■□□□□ 0.99
PTP4A3-201ENST00000329397 UPF3BQ9BZI7 483 aaKnown RBP21.25■□□□□ 0.99
PTP4A3-201ENST00000329397 IL1RAPL2Q9NP60 686 aa21.25■□□□□ 0.99
PTP4A3-201ENST00000329397 TMX3Q96JJ7 454 aa21.25■□□□□ 0.99
PTP4A3-201ENST00000329397 MAP4K4O95819 1239 aaPredicted RBP21.25■□□□□ 0.99
PTP4A3-201ENST00000329397 CCT4P50991 539 aaKnown RBP21.25■□□□□ 0.99
PTP4A3-201ENST00000329397 NGDNQ8NEJ9 315 aaKnown RBP21.25■□□□□ 0.99
PTP4A3-201ENST00000329397 RGPD1P0DJD0 1748 aa21.24■□□□□ 0.99
PTP4A3-201ENST00000329397 IL25Q9H293 177 aa21.24■□□□□ 0.99
PTP4A3-201ENST00000329397 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
PTP4A3-201ENST00000329397 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
PTP4A3-201ENST00000329397 HDGFP51858 240 aaKnown RBP21.24■□□□□ 0.99
PTP4A3-201ENST00000329397 TPRNQ4KMQ1 711 aa21.24■□□□□ 0.99
PTP4A3-201ENST00000329397 MX1P20591 662 aa21.23■□□□□ 0.99
PTP4A3-201ENST00000329397 CCDC173Q0VFZ6 552 aa21.23■□□□□ 0.99
PTP4A3-201ENST00000329397 LRRCC1Q9C099 1032 aa21.23■□□□□ 0.99
PTP4A3-201ENST00000329397 SIRT1Q96EB6 747 aa21.23■□□□□ 0.99
PTP4A3-201ENST00000329397 ESYT1Q9BSJ8 1104 aa21.23■□□□□ 0.99
PTP4A3-201ENST00000329397 USHBP1Q8N6Y0 703 aa21.22■□□□□ 0.99
PTP4A3-201ENST00000329397 TMEM63CQ9P1W3 806 aa21.22■□□□□ 0.99
PTP4A3-201ENST00000329397 SYCE3A1L190 88 aa21.21■□□□□ 0.99
PTP4A3-201ENST00000329397 DTNBO60941 627 aa21.21■□□□□ 0.99
PTP4A3-201ENST00000329397 ANP32BQ92688 251 aaKnown RBP21.21■□□□□ 0.99
PTP4A3-201ENST00000329397 OSBPL3Q9H4L5 887 aa21.21■□□□□ 0.99
PTP4A3-201ENST00000329397 CWC22Q9HCG8 908 aaKnown RBP21.21■□□□□ 0.99
PTP4A3-201ENST00000329397 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
PTP4A3-201ENST00000329397 ZNF445P59923 1031 aa21.2■□□□□ 0.98
PTP4A3-201ENST00000329397 NUTM1Q86Y26 1132 aa21.2■□□□□ 0.98
PTP4A3-201ENST00000329397 ARHGEF10O15013 1369 aa21.2■□□□□ 0.98
PTP4A3-201ENST00000329397 USP31Q70CQ4 1352 aa21.2■□□□□ 0.98
PTP4A3-201ENST00000329397 PPP1R9BQ96SB3 815 aa21.2■□□□□ 0.98
PTP4A3-201ENST00000329397 GDPD2Q9HCC8 539 aa21.2■□□□□ 0.98
PTP4A3-201ENST00000329397 SALL3Q9BXA9 1300 aa21.2■□□□□ 0.98
PTP4A3-201ENST00000329397 TAF7LQ5H9L4 462 aa21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 RNF214Q8ND24 703 aa21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 RGPD8O14715 1765 aaPredicted RBP21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 FLT4P35916 1363 aa21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 NLRP6P59044 892 aa21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 PHAXQ9H814 394 aaKnown RBP21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 AMOTL2Q9Y2J4 779 aa21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 CHMLP26374 656 aa21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 LARP6Q9BRS8 491 aaKnown RBP21.19■□□□□ 0.98
PTP4A3-201ENST00000329397 NALCNQ8IZF0 1738 aa21.18■□□□□ 0.98
PTP4A3-201ENST00000329397 TOPAZ1Q8N9V7 1692 aa21.18■□□□□ 0.98
PTP4A3-201ENST00000329397 IBTKQ9P2D0 1353 aaPredicted RBP21.18■□□□□ 0.98
PTP4A3-201ENST00000329397 IL17REQ8NFR9 667 aa21.18■□□□□ 0.98
PTP4A3-201ENST00000329397 UBR1Q8IWV7 1749 aa21.17■□□□□ 0.98
PTP4A3-201ENST00000329397 FMN2Q9NZ56 1722 aa21.17■□□□□ 0.98
PTP4A3-201ENST00000329397 IGSF1Q8N6C5 1336 aa21.17■□□□□ 0.98
PTP4A3-201ENST00000329397 SETD1BQ9UPS6 1966 aaKnown RBP21.17■□□□□ 0.98
PTP4A3-201ENST00000329397 SBNO1A3KN83 1393 aa21.17■□□□□ 0.98
PTP4A3-201ENST00000329397 CCDC30Q5VVM6 783 aa21.16■□□□□ 0.98
PTP4A3-201ENST00000329397 C14orf37Q86TY3 774 aa21.16■□□□□ 0.98
PTP4A3-201ENST00000329397 ATP8B2P98198 1209 aa21.16■□□□□ 0.98
PTP4A3-201ENST00000329397 SSH2Q76I76 1423 aa21.16■□□□□ 0.98
PTP4A3-201ENST00000329397 EIF2S2P20042 333 aaKnown RBP21.15■□□□□ 0.98
PTP4A3-201ENST00000329397 ZSCAN30Q86W11 494 aa21.15■□□□□ 0.98
PTP4A3-201ENST00000329397 USP44Q9H0E7 712 aa21.15■□□□□ 0.98
PTP4A3-201ENST00000329397 GNAT3A8MTJ3 354 aa21.15■□□□□ 0.98
PTP4A3-201ENST00000329397 KDRP35968 1356 aa21.15■□□□□ 0.98
PTP4A3-201ENST00000329397 ANXA1P04083 346 aa21.14■□□□□ 0.98
PTP4A3-201ENST00000329397 GNAI3P08754 354 aa21.14■□□□□ 0.98
PTP4A3-201ENST00000329397 MSNP26038 577 aaKnown RBP21.13■□□□□ 0.97
PTP4A3-201ENST00000329397 ZBTB7CA1YPR0 619 aa21.13■□□□□ 0.97
PTP4A3-201ENST00000329397 UBTFL1P0CB47 393 aaPredicted RBP21.13■□□□□ 0.97
PTP4A3-201ENST00000329397 KIAA1211Q6ZU35 1233 aa21.13■□□□□ 0.97
PTP4A3-201ENST00000329397 TCHHQ07283 1943 aa21.12■□□□□ 0.97
PTP4A3-201ENST00000329397 SURF6O75683 361 aaKnown RBP21.12■□□□□ 0.97
PTP4A3-201ENST00000329397 HDGFL1Q5TGJ6 251 aa21.12■□□□□ 0.97
PTP4A3-201ENST00000329397 TUBGCP6Q96RT7 1819 aa21.11■□□□□ 0.97
PTP4A3-201ENST00000329397 RBM33Q96EV2 1170 aaKnown RBP21.11■□□□□ 0.97
PTP4A3-201ENST00000329397 MCCP23508 829 aa21.11■□□□□ 0.97
PTP4A3-201ENST00000329397 HOXC9P31274 260 aa21.11■□□□□ 0.97
PTP4A3-201ENST00000329397 PPP1R42Q7Z4L9 355 aa21.11■□□□□ 0.97
PTP4A3-201ENST00000329397 MPNDQ8N594 471 aa21.11■□□□□ 0.97
PTP4A3-201ENST00000329397 FAM208AQ9UK61 1670 aaKnown RBP21.11■□□□□ 0.97
PTP4A3-201ENST00000329397 GADD45BO75293 160 aaPredicted RBP21.1■□□□□ 0.97
PTP4A3-201ENST00000329397 BRD1O95696 1058 aa21.1■□□□□ 0.97
PTP4A3-201ENST00000329397 XRN1Q8IZH2 1706 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms