RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 LRRCC1Q9C099 1032 aa17.23■□□□□ 0.35
ATP2C1-201ENST00000328560 IL1RAPL2Q9NP60 686 aa17.23■□□□□ 0.35
ATP2C1-201ENST00000328560 ARHGEF10O15013 1369 aa17.23■□□□□ 0.35
ATP2C1-201ENST00000328560 CHAMP1Q96JM3 812 aa17.22■□□□□ 0.35
ATP2C1-201ENST00000328560 USP31Q70CQ4 1352 aa17.22■□□□□ 0.35
ATP2C1-201ENST00000328560 ANO2Q9NQ90 1003 aa17.22■□□□□ 0.35
ATP2C1-201ENST00000328560 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.22■□□□□ 0.35
ATP2C1-201ENST00000328560 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
ATP2C1-201ENST00000328560 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
ATP2C1-201ENST00000328560 GNAI3P08754 354 aa17.21■□□□□ 0.35
ATP2C1-201ENST00000328560 HOXC9P31274 260 aa17.2■□□□□ 0.34
ATP2C1-201ENST00000328560 NUCB2P80303 420 aa17.2■□□□□ 0.34
ATP2C1-201ENST00000328560 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
ATP2C1-201ENST00000328560 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
ATP2C1-201ENST00000328560 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
ATP2C1-201ENST00000328560 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
ATP2C1-201ENST00000328560 MX1P20591 662 aa17.2■□□□□ 0.34
ATP2C1-201ENST00000328560 PTMSP20962 102 aa17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 AKAP12Q02952 1782 aa17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 PRPF40AO75400 957 aaKnown RBP17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 UBTFL1P0CB47 393 aaPredicted RBP17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 NAP1L5Q96NT1 182 aaPredicted RBP17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 PEAK1Q9H792 1746 aa17.19■□□□□ 0.34
ATP2C1-201ENST00000328560 PSME1Q06323 249 aa17.18■□□□□ 0.34
ATP2C1-201ENST00000328560 TAF7Q15545 349 aaPredicted RBP17.18■□□□□ 0.34
ATP2C1-201ENST00000328560 NUTM1Q86Y26 1132 aa17.18■□□□□ 0.34
ATP2C1-201ENST00000328560 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
ATP2C1-201ENST00000328560 ANXA1P04083 346 aa17.17■□□□□ 0.34
ATP2C1-201ENST00000328560 RIMS1Q86UR5 1692 aaKnown RBP17.17■□□□□ 0.34
ATP2C1-201ENST00000328560 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
ATP2C1-201ENST00000328560 AK9Q5TCS8 1911 aa17.16■□□□□ 0.34
ATP2C1-201ENST00000328560 SURF6O75683 361 aaKnown RBP17.16■□□□□ 0.34
ATP2C1-201ENST00000328560 UPF3BQ9BZI7 483 aaKnown RBP17.16■□□□□ 0.34
ATP2C1-201ENST00000328560 TPRNQ4KMQ1 711 aa17.16■□□□□ 0.34
ATP2C1-201ENST00000328560 ESYT1Q9BSJ8 1104 aa17.16■□□□□ 0.34
ATP2C1-201ENST00000328560 KLHL40Q2TBA0 621 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 ESCO1Q5FWF5 840 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 PALD1Q9ULE6 856 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 MCCP23508 829 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 ANP32BQ92688 251 aaKnown RBP17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 USP44Q9H0E7 712 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 KIF13AQ9H1H9 1805 aa17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 NASPP49321 788 aaPredicted RBP17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
ATP2C1-201ENST00000328560 KDRP35968 1356 aa17.14■□□□□ 0.33
ATP2C1-201ENST00000328560 UBR1Q8IWV7 1749 aa17.14■□□□□ 0.33
ATP2C1-201ENST00000328560 TMX3Q96JJ7 454 aa17.14■□□□□ 0.33
ATP2C1-201ENST00000328560 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
ATP2C1-201ENST00000328560 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
ATP2C1-201ENST00000328560 RBM27Q9P2N5 1060 aaKnown RBP17.14■□□□□ 0.33
ATP2C1-201ENST00000328560 LGR6Q9HBX8 967 aa17.13■□□□□ 0.33
ATP2C1-201ENST00000328560 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
ATP2C1-201ENST00000328560 ESPNB1AK53 854 aa17.13■□□□□ 0.33
ATP2C1-201ENST00000328560 CHMLP26374 656 aa17.13■□□□□ 0.33
ATP2C1-201ENST00000328560 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
ATP2C1-201ENST00000328560 HTATSF1O43719 755 aaKnown RBP17.12■□□□□ 0.33
ATP2C1-201ENST00000328560 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
ATP2C1-201ENST00000328560 OS9Q13438 667 aaPredicted RBP17.12■□□□□ 0.33
ATP2C1-201ENST00000328560 LMBRD1Q9NUN5 540 aa17.12■□□□□ 0.33
ATP2C1-201ENST00000328560 KCNQ3O43525 872 aa17.12■□□□□ 0.33
ATP2C1-201ENST00000328560 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
ATP2C1-201ENST00000328560 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
ATP2C1-201ENST00000328560 ZDHHC9Q9Y397 364 aa17.11■□□□□ 0.33
ATP2C1-201ENST00000328560 LRRC59Q96AG4 307 aaKnown RBP17.11■□□□□ 0.33
ATP2C1-201ENST00000328560 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
ATP2C1-201ENST00000328560 ERBB4Q15303 1308 aa17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 TEFQ10587 303 aa17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 NBPF7P0C2Y1 421 aaPredicted RBP17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 NBPF6Q5VWK0 638 aa17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 NBPF4Q96M43 638 aa17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
ATP2C1-201ENST00000328560 ZSCAN23Q3MJ62 389 aa17.09■□□□□ 0.33
ATP2C1-201ENST00000328560 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
ATP2C1-201ENST00000328560 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
ATP2C1-201ENST00000328560 CLCN1P35523 988 aa17.09■□□□□ 0.33
ATP2C1-201ENST00000328560 CLEC17AQ6ZS10 378 aa17.09■□□□□ 0.33
ATP2C1-201ENST00000328560 IL25Q9H293 177 aa17.08■□□□□ 0.32
ATP2C1-201ENST00000328560 ZNF530Q6P9A1 599 aaPredicted RBP17.08■□□□□ 0.32
ATP2C1-201ENST00000328560 SALL3Q9BXA9 1300 aa17.07■□□□□ 0.32
ATP2C1-201ENST00000328560 RHPN1Q8TCX5 695 aa17.07■□□□□ 0.32
ATP2C1-201ENST00000328560 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
ATP2C1-201ENST00000328560 GPT2Q8TD30 523 aa17.06■□□□□ 0.32
ATP2C1-201ENST00000328560 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
ATP2C1-201ENST00000328560 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-201ENST00000328560 DTNBO60941 627 aa17.06■□□□□ 0.32
ATP2C1-201ENST00000328560 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
ATP2C1-201ENST00000328560 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-201ENST00000328560 GDPD2Q9HCC8 539 aa17.06■□□□□ 0.32
ATP2C1-201ENST00000328560 NSFL1CQ9UNZ2 370 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms