RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CENPBP07199 599 aaPredicted RBP6.68□□□□□ -1.34
LRIT3-201ENST00000327908 USHBP1Q8N6Y0 703 aa6.68□□□□□ -1.34
LRIT3-201ENST00000327908 USP35Q9P2H5 1018 aa6.68□□□□□ -1.34
LRIT3-201ENST00000327908 DDX54Q8TDD1 881 aaKnown RBP6.67□□□□□ -1.34
LRIT3-201ENST00000327908 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
LRIT3-201ENST00000327908 SIPA1L3O60292 1781 aaPredicted RBP6.67□□□□□ -1.34
LRIT3-201ENST00000327908 CYP27B1O15528 508 aa6.67□□□□□ -1.34
LRIT3-201ENST00000327908 STARD3NLO95772 234 aa6.67□□□□□ -1.34
LRIT3-201ENST00000327908 ADRA2BP18089 450 aa6.67□□□□□ -1.34
LRIT3-201ENST00000327908 HNRNPUQ00839 825 aaKnown RBP eCLIP6.67□□□□□ -1.34
LRIT3-201ENST00000327908 RC3H1Q5TC82 1133 aaKnown RBP6.67□□□□□ -1.34
LRIT3-201ENST00000327908 WWC1Q8IX03 1113 aa6.67□□□□□ -1.34
LRIT3-201ENST00000327908 TSPYL4Q9UJ04 414 aa6.67□□□□□ -1.34
LRIT3-201ENST00000327908 C5P01031 1676 aa6.67□□□□□ -1.34
LRIT3-201ENST00000327908 KDM3BQ7LBC6 1761 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 BTBD11A6QL63 1104 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 HSP90B1P14625 803 aaKnown RBP6.66□□□□□ -1.34
LRIT3-201ENST00000327908 FBLN1P23142 703 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 MARCH10Q8NA82 808 aaPredicted RBP6.66□□□□□ -1.34
LRIT3-201ENST00000327908 KDM6AO15550 1401 aaPredicted RBP6.66□□□□□ -1.34
LRIT3-201ENST00000327908 LAMB4A4D0S4 1761 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 CHL1O00533 1208 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 SNRPA1P09661 255 aaKnown RBP6.66□□□□□ -1.34
LRIT3-201ENST00000327908 NBPF14Q5TI25 921 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 POTEAQ6S8J7 498 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 IBTKQ9P2D0 1353 aaPredicted RBP6.66□□□□□ -1.34
LRIT3-201ENST00000327908 ALDH1L2Q3SY69 923 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 DLG5Q8TDM6 1919 aa6.66□□□□□ -1.34
LRIT3-201ENST00000327908 ZNF853P0CG23 659 aa6.65□□□□□ -1.34
LRIT3-201ENST00000327908 CCDC30Q5VVM6 783 aa6.65□□□□□ -1.34
LRIT3-201ENST00000327908 CCDC146Q8IYE0 955 aa6.65□□□□□ -1.34
LRIT3-201ENST00000327908 STK31Q9BXU1 1019 aa6.65□□□□□ -1.34
LRIT3-201ENST00000327908 ZNF521Q96K83 1311 aa6.65□□□□□ -1.34
LRIT3-201ENST00000327908 CNTNAP4Q9C0A0 1308 aa6.65□□□□□ -1.34
LRIT3-201ENST00000327908 HEG1Q9ULI3 1381 aa6.65□□□□□ -1.35
LRIT3-201ENST00000327908 IPO8O15397 1037 aaKnown RBP6.65□□□□□ -1.35
LRIT3-201ENST00000327908 DDX58O95786 925 aaKnown RBP6.65□□□□□ -1.35
LRIT3-201ENST00000327908 AAMPQ13685 434 aa6.65□□□□□ -1.35
LRIT3-201ENST00000327908 RGS17Q9UGC6 210 aaPredicted RBP6.65□□□□□ -1.35
LRIT3-201ENST00000327908 UBR2Q8IWV8 1755 aa6.65□□□□□ -1.35
LRIT3-201ENST00000327908 PHACTR3Q96KR7 559 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 KIF16BQ96L93 1317 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 PALLDQ8WX93 1383 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 BRWD3Q6RI45 1802 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 SBF2Q86WG5 1849 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 HSP90AB3PQ58FF7 597 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 ZNF790Q6PG37 636 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 TRIM35Q9UPQ4 493 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 CACNA1FO60840 1977 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 QSER1Q2KHR3 1735 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 ITGB4P16144 1822 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 VIRMAQ69YN4 1812 aaKnown RBP6.64□□□□□ -1.35
LRIT3-201ENST00000327908 SLFN5Q08AF3 891 aa6.64□□□□□ -1.35
LRIT3-201ENST00000327908 BRPF1P55201 1214 aaPredicted RBP6.63□□□□□ -1.35
LRIT3-201ENST00000327908 MPRIPQ6WCQ1 1025 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 IL17REQ8NFR9 667 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 HYPKQ9NX55 129 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 LY75O60449 1722 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 BTAF1O14981 1849 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 TNS1Q9HBL0 1735 aaKnown RBP6.63□□□□□ -1.35
LRIT3-201ENST00000327908 PDZRN3Q9UPQ7 1066 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 ZNF652Q9Y2D9 606 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 TOGARAM1Q9Y4F4 1720 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 RNF123Q5XPI4 1314 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 PRIM1P49642 420 aaKnown RBP6.63□□□□□ -1.35
LRIT3-201ENST00000327908 STK32BQ9NY57 414 aa6.63□□□□□ -1.35
LRIT3-201ENST00000327908 SLC16A10Q8TF71 515 aa6.62□□□□□ -1.35
LRIT3-201ENST00000327908 RREB1Q92766 1687 aa6.62□□□□□ -1.35
LRIT3-201ENST00000327908 PTPRCP08575 1304 aa6.62□□□□□ -1.35
LRIT3-201ENST00000327908 TRMT2AQ8IZ69 625 aaKnown RBP6.62□□□□□ -1.35
LRIT3-201ENST00000327908 API5Q9BZZ5 524 aaKnown RBP6.62□□□□□ -1.35
LRIT3-201ENST00000327908 EIF4A1P60842 406 aaKnown RBP6.62□□□□□ -1.35
LRIT3-201ENST00000327908 CCDC184Q52MB2 194 aa6.62□□□□□ -1.35
LRIT3-201ENST00000327908 SYTL4Q96C24 671 aaPredicted RBP6.62□□□□□ -1.35
LRIT3-201ENST00000327908 DBF4Q9UBU7 674 aaPredicted RBP6.62□□□□□ -1.35
LRIT3-201ENST00000327908 KCPQ6ZWJ8 1503 aa6.62□□□□□ -1.35
LRIT3-201ENST00000327908 FANCIQ9NVI1 1328 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 LOC102724428A0A0B4J2F2 783 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 SSFA2P28290 1259 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 SIK1P57059 783 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 NEUROD2Q15784 382 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 PIGBQ92521 554 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 ARHGAP45Q92619 1136 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 CCNL1Q9UK58 526 aaPredicted RBP6.61□□□□□ -1.35
LRIT3-201ENST00000327908 PXDNLA1KZ92 1463 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 APBA3O96018 575 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 IL6STP40189 918 aaPredicted RBP6.61□□□□□ -1.35
LRIT3-201ENST00000327908 KIF6Q6ZMV9 814 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 CCDC87Q9NVE4 849 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 MCM10Q7L590 875 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 NFATC2IPQ8NCF5 419 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 AK7Q96M32 723 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 ATG3Q9NT62 314 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 ATP10DQ9P241 1426 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 KAT6BQ8WYB5 2073 aa6.61□□□□□ -1.35
LRIT3-201ENST00000327908 TWISTNBQ3B726 338 aaPredicted RBP6.6□□□□□ -1.35
LRIT3-201ENST00000327908 ERVV-1B6SEH8 477 aa6.6□□□□□ -1.35
LRIT3-201ENST00000327908 DDX21Q9NR30 783 aaKnown RBP eCLIP6.6□□□□□ -1.35
LRIT3-201ENST00000327908 MBIPQ9NS73 344 aa6.6□□□□□ -1.35
LRIT3-201ENST00000327908 HDGFL1Q5TGJ6 251 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms