RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 CCDC30Q5VVM6 783 aa33.43■■■□□ 2.94
TM6SF1-202ENST00000322019 PTPRCP08575 1304 aa33.42■■■□□ 2.94
TM6SF1-202ENST00000322019 OVOS2A0A0G2JMS6 1433 aa33.42■■■□□ 2.94
TM6SF1-202ENST00000322019 F6X3S4 739 aa33.41■■■□□ 2.94
TM6SF1-202ENST00000322019 EIF2S2P20042 333 aaKnown RBP33.41■■■□□ 2.94
TM6SF1-202ENST00000322019 HDGFL1Q5TGJ6 251 aa33.41■■■□□ 2.94
TM6SF1-202ENST00000322019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.41■■■□□ 2.94
TM6SF1-202ENST00000322019 AHDC1Q5TGY3 1603 aaPredicted RBP33.41■■■□□ 2.94
TM6SF1-202ENST00000322019 EVA1CP58658 441 aa33.4■■■□□ 2.94
TM6SF1-202ENST00000322019 IFNL2Q8IZJ0 200 aa33.4■■■□□ 2.94
TM6SF1-202ENST00000322019 USP35Q9P2H5 1018 aa33.4■■■□□ 2.94
TM6SF1-202ENST00000322019 ADAMTS7Q9UKP4 1686 aa33.39■■■□□ 2.94
TM6SF1-202ENST00000322019 PIP4K2BP78356 416 aa33.39■■■□□ 2.94
TM6SF1-202ENST00000322019 INTS3Q68E01 1043 aaKnown RBP33.37■■■□□ 2.93
TM6SF1-202ENST00000322019 BTG4Q9NY30 223 aa33.37■■■□□ 2.93
TM6SF1-202ENST00000322019 SIPA1L3O60292 1781 aaPredicted RBP33.37■■■□□ 2.93
TM6SF1-202ENST00000322019 PKD1L3Q7Z443 1732 aa33.37■■■□□ 2.93
TM6SF1-202ENST00000322019 FLIIQ13045 1269 aa33.37■■■□□ 2.93
TM6SF1-202ENST00000322019 SLC39A6Q13433 755 aa33.37■■■□□ 2.93
TM6SF1-202ENST00000322019 SLC4A10Q6U841 1118 aa33.37■■■□□ 2.93
TM6SF1-202ENST00000322019 PRAMEF22A3QJZ6 481 aa33.36■■■□□ 2.93
TM6SF1-202ENST00000322019 NFATC2IPQ8NCF5 419 aa33.36■■■□□ 2.93
TM6SF1-202ENST00000322019 HDAC1Q13547 482 aaPredicted RBP33.35■■■□□ 2.93
TM6SF1-202ENST00000322019 CARD10Q9BWT7 1032 aa33.35■■■□□ 2.93
TM6SF1-202ENST00000322019 SLC52A2Q9HAB3 445 aa33.35■■■□□ 2.93
TM6SF1-202ENST00000322019 SCN11AQ9UI33 1791 aa33.34■■■□□ 2.93
TM6SF1-202ENST00000322019 FKBP5Q13451 457 aaPredicted RBP33.34■■■□□ 2.93
TM6SF1-202ENST00000322019 PDZRN3Q9UPQ7 1066 aa33.34■■■□□ 2.93
TM6SF1-202ENST00000322019 SOS1Q07889 1333 aaPredicted RBP33.34■■■□□ 2.93
TM6SF1-202ENST00000322019 PHAXQ9H814 394 aaKnown RBP33.33■■■□□ 2.93
TM6SF1-202ENST00000322019 PDE4AP27815 886 aa33.32■■■□□ 2.92
TM6SF1-202ENST00000322019 CHPF2Q9P2E5 772 aa33.32■■■□□ 2.92
TM6SF1-202ENST00000322019 ANXA1P04083 346 aa33.32■■■□□ 2.92
TM6SF1-202ENST00000322019 DCAF5Q96JK2 942 aa33.3■■■□□ 2.92
TM6SF1-202ENST00000322019 IL2RBP14784 551 aa33.3■■■□□ 2.92
TM6SF1-202ENST00000322019 ZCRB1Q8TBF4 217 aaKnown RBP33.3■■■□□ 2.92
TM6SF1-202ENST00000322019 PARP4Q9UKK3 1724 aaKnown RBP33.29■■■□□ 2.92
TM6SF1-202ENST00000322019 GIGYF1O75420 1035 aaPredicted RBP33.29■■■□□ 2.92
TM6SF1-202ENST00000322019 SIRT2Q8IXJ6 389 aa33.29■■■□□ 2.92
TM6SF1-202ENST00000322019 PHLPP1O60346 1717 aa33.28■■■□□ 2.92
TM6SF1-202ENST00000322019 MEIS3Q99687 375 aa33.28■■■□□ 2.92
TM6SF1-202ENST00000322019 ZNF790Q6PG37 636 aa33.27■■■□□ 2.92
TM6SF1-202ENST00000322019 CHMP4BQ9H444 224 aaKnown RBP33.27■■■□□ 2.92
TM6SF1-202ENST00000322019 HOXB7P09629 217 aa33.27■■■□□ 2.92
TM6SF1-202ENST00000322019 COL16A1Q07092 1604 aaPredicted RBP33.27■■■□□ 2.92
TM6SF1-202ENST00000322019 COL22A1Q8NFW1 1626 aaPredicted RBP33.26■■■□□ 2.92
TM6SF1-202ENST00000322019 DDX54Q8TDD1 881 aaKnown RBP33.26■■■□□ 2.92
TM6SF1-202ENST00000322019 BACH2Q9BYV9 841 aa33.26■■■□□ 2.92
TM6SF1-202ENST00000322019 ADAMTS2O95450 1211 aa33.25■■■□□ 2.91
TM6SF1-202ENST00000322019 PLEKHG2Q9H7P9 1386 aa33.25■■■□□ 2.91
TM6SF1-202ENST00000322019 HEG1Q9ULI3 1381 aa33.25■■■□□ 2.91
TM6SF1-202ENST00000322019 PCDH11XQ9BZA7 1347 aa33.25■■■□□ 2.91
TM6SF1-202ENST00000322019 PCDH11YQ9BZA8 1340 aa33.25■■■□□ 2.91
TM6SF1-202ENST00000322019 TOM1O60784 492 aa33.23■■■□□ 2.91
TM6SF1-202ENST00000322019 PROSER3Q2NL68 480 aa33.22■■■□□ 2.91
TM6SF1-202ENST00000322019 SMC5Q8IY18 1101 aa33.22■■■□□ 2.91
TM6SF1-202ENST00000322019 HSP90AB1P08238 724 aaKnown RBP33.22■■■□□ 2.91
TM6SF1-202ENST00000322019 MRC1P22897 1456 aa33.21■■■□□ 2.91
TM6SF1-202ENST00000322019 CABP4P57796 275 aa33.21■■■□□ 2.91
TM6SF1-202ENST00000322019 COL14A1Q05707 1796 aaKnown RBP33.21■■■□□ 2.91
TM6SF1-202ENST00000322019 CACNA1FO60840 1977 aa33.21■■■□□ 2.91
TM6SF1-202ENST00000322019 CCT4P50991 539 aaKnown RBP33.2■■■□□ 2.91
TM6SF1-202ENST00000322019 ZNF496Q96IT1 587 aaPredicted RBP33.2■■■□□ 2.91
TM6SF1-202ENST00000322019 NUTM2BA6NNL0 878 aaPredicted RBP33.19■■■□□ 2.9
TM6SF1-202ENST00000322019 NUTM2EB1AL46 878 aaPredicted RBP33.19■■■□□ 2.9
TM6SF1-202ENST00000322019 NUTM2AQ8IVF1 878 aaPredicted RBP33.19■■■□□ 2.9
TM6SF1-202ENST00000322019 SHANK3Q9BYB0 1731 aa33.19■■■□□ 2.9
TM6SF1-202ENST00000322019 UBAP1LF5GYI3 381 aa33.18■■■□□ 2.9
TM6SF1-202ENST00000322019 ATP10DQ9P241 1426 aa33.17■■■□□ 2.9
TM6SF1-202ENST00000322019 MSH5O43196 834 aa33.16■■■□□ 2.9
TM6SF1-202ENST00000322019 C5P01031 1676 aa33.16■■■□□ 2.9
TM6SF1-202ENST00000322019 C8orf34Q49A92 452 aa33.16■■■□□ 2.9
TM6SF1-202ENST00000322019 DBF4Q9UBU7 674 aaPredicted RBP33.16■■■□□ 2.9
TM6SF1-202ENST00000322019 TTC5Q8N0Z6 440 aa33.14■■■□□ 2.9
TM6SF1-202ENST00000322019 PI4KAP2A4QPH2 592 aa33.13■■■□□ 2.89
TM6SF1-202ENST00000322019 PI4KAP1Q8N8J0 262 aa33.13■■■□□ 2.89
TM6SF1-202ENST00000322019 CEP85Q6P2H3 762 aa33.13■■■□□ 2.89
TM6SF1-202ENST00000322019 LNPKQ9C0E8 428 aa33.13■■■□□ 2.89
TM6SF1-202ENST00000322019 FAM161AQ3B820 660 aa33.12■■■□□ 2.89
TM6SF1-202ENST00000322019 NUCB1Q02818 461 aa33.11■■■□□ 2.89
TM6SF1-202ENST00000322019 NKX1-1Q15270 411 aaPredicted RBP33.1■■■□□ 2.89
TM6SF1-202ENST00000322019 ANKRD44Q8N8A2 993 aa33.09■■■□□ 2.89
TM6SF1-202ENST00000322019 ADCY9O60503 1353 aa33.09■■■□□ 2.89
TM6SF1-202ENST00000322019 PIP4K2AP48426 406 aaPredicted RBP33.09■■■□□ 2.89
TM6SF1-202ENST00000322019 PDIA6Q15084 440 aa33.09■■■□□ 2.89
TM6SF1-202ENST00000322019 CHMP4AQ9BY43 222 aa33.09■■■□□ 2.89
TM6SF1-202ENST00000322019 USP16Q9Y5T5 823 aa33.09■■■□□ 2.89
TM6SF1-202ENST00000322019 ANKRD45Q5TZF3 282 aa33.08■■■□□ 2.89
TM6SF1-202ENST00000322019 PLCH1Q4KWH8 1693 aa33.08■■■□□ 2.89
TM6SF1-202ENST00000322019 NPM2Q86SE8 214 aaKnown RBP33.08■■■□□ 2.89
TM6SF1-202ENST00000322019 FMNL2Q96PY5 1086 aa33.07■■■□□ 2.88
TM6SF1-202ENST00000322019 MYL6BP14649 208 aa33.06■■■□□ 2.88
TM6SF1-202ENST00000322019 CHD1LQ86WJ1 897 aa33.06■■■□□ 2.88
TM6SF1-202ENST00000322019 DNAAF4Q8WXU2 420 aa33.06■■■□□ 2.88
TM6SF1-202ENST00000322019 GCC1Q96CN9 775 aa33.06■■■□□ 2.88
TM6SF1-202ENST00000322019 BCL11AQ9H165 835 aa33.06■■■□□ 2.88
TM6SF1-202ENST00000322019 PXDNLA1KZ92 1463 aa33.06■■■□□ 2.88
TM6SF1-202ENST00000322019 AIMP1Q12904 312 aaKnown RBP33.06■■■□□ 2.88
TM6SF1-202ENST00000322019 DISP2A7MBM2 1401 aa33.05■■■□□ 2.88
TM6SF1-202ENST00000322019 ERVV-2B6SEH9 535 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms