RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 HSP90AB1P08238 724 aaKnown RBP22.62■■□□□ 1.21
RAB39A-201ENST00000320578 PHKG2P15735 406 aa22.62■■□□□ 1.21
RAB39A-201ENST00000320578 STK31Q9BXU1 1019 aa22.62■■□□□ 1.21
RAB39A-201ENST00000320578 RGS12O14924 1447 aa22.62■■□□□ 1.21
RAB39A-201ENST00000320578 BTBD11A6QL63 1104 aa22.61■■□□□ 1.21
RAB39A-201ENST00000320578 RBM19Q9Y4C8 960 aaKnown RBP22.59■■□□□ 1.21
RAB39A-201ENST00000320578 HEG1Q9ULI3 1381 aa22.59■■□□□ 1.21
RAB39A-201ENST00000320578 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
RAB39A-201ENST00000320578 DCAF5Q96JK2 942 aa22.59■■□□□ 1.21
RAB39A-201ENST00000320578 SIPA1L3O60292 1781 aaPredicted RBP22.58■■□□□ 1.2
RAB39A-201ENST00000320578 CACNA1FO60840 1977 aa22.57■■□□□ 1.2
RAB39A-201ENST00000320578 MRC1P22897 1456 aa22.57■■□□□ 1.2
RAB39A-201ENST00000320578 KDM6AO15550 1401 aaPredicted RBP22.57■■□□□ 1.2
RAB39A-201ENST00000320578 PARP4Q9UKK3 1724 aaKnown RBP22.56■■□□□ 1.2
RAB39A-201ENST00000320578 SLC52A2Q9HAB3 445 aa22.56■■□□□ 1.2
RAB39A-201ENST00000320578 TOM1O60784 492 aa22.55■■□□□ 1.2
RAB39A-201ENST00000320578 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
RAB39A-201ENST00000320578 CYP27B1O15528 508 aa22.54■■□□□ 1.2
RAB39A-201ENST00000320578 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
RAB39A-201ENST00000320578 VIRMAQ69YN4 1812 aaKnown RBP22.54■■□□□ 1.2
RAB39A-201ENST00000320578 EVA1CP58658 441 aa22.54■■□□□ 1.2
RAB39A-201ENST00000320578 COL14A1Q05707 1796 aaKnown RBP22.54■■□□□ 1.2
RAB39A-201ENST00000320578 IL2RBP14784 551 aa22.53■■□□□ 1.2
RAB39A-201ENST00000320578 CCT4P50991 539 aaKnown RBP22.53■■□□□ 1.2
RAB39A-201ENST00000320578 ZCRB1Q8TBF4 217 aaKnown RBP22.53■■□□□ 1.2
RAB39A-201ENST00000320578 PCDH11XQ9BZA7 1347 aa22.53■■□□□ 1.2
RAB39A-201ENST00000320578 PCDH11YQ9BZA8 1340 aa22.53■■□□□ 1.2
RAB39A-201ENST00000320578 FLIIQ13045 1269 aa22.52■■□□□ 1.2
RAB39A-201ENST00000320578 NKX1-1Q15270 411 aaPredicted RBP22.52■■□□□ 1.2
RAB39A-201ENST00000320578 G2E3Q7L622 706 aa22.52■■□□□ 1.2
RAB39A-201ENST00000320578 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
RAB39A-201ENST00000320578 KCNQ3O43525 872 aa22.51■■□□□ 1.19
RAB39A-201ENST00000320578 LARP1Q6PKG0 1096 aaKnown RBP22.51■■□□□ 1.19
RAB39A-201ENST00000320578 GIGYF1O75420 1035 aaPredicted RBP22.5■■□□□ 1.19
RAB39A-201ENST00000320578 COL16A1Q07092 1604 aaPredicted RBP22.5■■□□□ 1.19
RAB39A-201ENST00000320578 PXDNLA1KZ92 1463 aa22.5■■□□□ 1.19
RAB39A-201ENST00000320578 ZNF790Q6PG37 636 aa22.49■■□□□ 1.19
RAB39A-201ENST00000320578 STRN4Q9NRL3 753 aa22.47■■□□□ 1.19
RAB39A-201ENST00000320578 BTG4Q9NY30 223 aa22.47■■□□□ 1.19
RAB39A-201ENST00000320578 ERVV-2B6SEH9 535 aa22.47■■□□□ 1.19
RAB39A-201ENST00000320578 BACH2Q9BYV9 841 aa22.47■■□□□ 1.19
RAB39A-201ENST00000320578 PDZRN3Q9UPQ7 1066 aa22.47■■□□□ 1.19
RAB39A-201ENST00000320578 PHLPP1O60346 1717 aa22.47■■□□□ 1.19
RAB39A-201ENST00000320578 PDE4AP27815 886 aa22.46■■□□□ 1.19
RAB39A-201ENST00000320578 FKBP5Q13451 457 aaPredicted RBP22.46■■□□□ 1.19
RAB39A-201ENST00000320578 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
RAB39A-201ENST00000320578 DBF4Q9UBU7 674 aaPredicted RBP22.46■■□□□ 1.19
RAB39A-201ENST00000320578 GCC1Q96CN9 775 aa22.45■■□□□ 1.19
RAB39A-201ENST00000320578 RPAP2Q8IXW5 612 aaPredicted RBP22.45■■□□□ 1.18
RAB39A-201ENST00000320578 SKAP1Q86WV1 359 aa22.44■■□□□ 1.18
RAB39A-201ENST00000320578 EIF2S2P20042 333 aaKnown RBP22.43■■□□□ 1.18
RAB39A-201ENST00000320578 CABP4P57796 275 aa22.43■■□□□ 1.18
RAB39A-201ENST00000320578 NECTIN2Q92692 538 aa22.43■■□□□ 1.18
RAB39A-201ENST00000320578 CHPF2Q9P2E5 772 aa22.43■■□□□ 1.18
RAB39A-201ENST00000320578 DISP2A7MBM2 1401 aa22.42■■□□□ 1.18
RAB39A-201ENST00000320578 RGS3P49796 1198 aa22.42■■□□□ 1.18
RAB39A-201ENST00000320578 F6X3S4 739 aa22.41■■□□□ 1.18
RAB39A-201ENST00000320578 ANKRD44Q8N8A2 993 aa22.41■■□□□ 1.18
RAB39A-201ENST00000320578 HYPKQ9NX55 129 aa22.41■■□□□ 1.18
RAB39A-201ENST00000320578 N4BP2Q86UW6 1770 aaPredicted RBP22.41■■□□□ 1.18
RAB39A-201ENST00000320578 FAM161AQ3B820 660 aa22.41■■□□□ 1.18
RAB39A-201ENST00000320578 SIRT2Q8IXJ6 389 aa22.41■■□□□ 1.18
RAB39A-201ENST00000320578 TTC5Q8N0Z6 440 aa22.41■■□□□ 1.18
RAB39A-201ENST00000320578 GNAI3P08754 354 aa22.4■■□□□ 1.18
RAB39A-201ENST00000320578 NUCB1Q02818 461 aa22.4■■□□□ 1.18
RAB39A-201ENST00000320578 PHAXQ9H814 394 aaKnown RBP22.4■■□□□ 1.18
RAB39A-201ENST00000320578 SLC4A10Q6U841 1118 aa22.39■■□□□ 1.17
RAB39A-201ENST00000320578 FMNL2Q96PY5 1086 aa22.39■■□□□ 1.17
RAB39A-201ENST00000320578 DDX21Q9NR30 783 aaKnown RBP eCLIP22.39■■□□□ 1.17
RAB39A-201ENST00000320578 ATP10DQ9P241 1426 aa22.39■■□□□ 1.17
RAB39A-201ENST00000320578 SHANK3Q9BYB0 1731 aa22.39■■□□□ 1.17
RAB39A-201ENST00000320578 SNRPA1P09661 255 aaKnown RBP22.38■■□□□ 1.17
RAB39A-201ENST00000320578 SLC39A6Q13433 755 aa22.38■■□□□ 1.17
RAB39A-201ENST00000320578 MEIS3Q99687 375 aa22.38■■□□□ 1.17
RAB39A-201ENST00000320578 CDCA7Q9BWT1 371 aaPredicted RBP22.38■■□□□ 1.17
RAB39A-201ENST00000320578 C1orf115Q9H7X2 142 aa22.38■■□□□ 1.17
RAB39A-201ENST00000320578 PLCH1Q4KWH8 1693 aa22.38■■□□□ 1.17
RAB39A-201ENST00000320578 CEP85Q6P2H3 762 aa22.37■■□□□ 1.17
RAB39A-201ENST00000320578 ZNF496Q96IT1 587 aaPredicted RBP22.37■■□□□ 1.17
RAB39A-201ENST00000320578 THRAP3Q9Y2W1 955 aaKnown RBP22.37■■□□□ 1.17
RAB39A-201ENST00000320578 IBTKQ9P2D0 1353 aaPredicted RBP22.37■■□□□ 1.17
RAB39A-201ENST00000320578 DCTPP1Q9H773 170 aa22.36■■□□□ 1.17
RAB39A-201ENST00000320578 UBAP1LF5GYI3 381 aa22.36■■□□□ 1.17
RAB39A-201ENST00000320578 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
RAB39A-201ENST00000320578 GNAI2P04899 355 aa22.35■■□□□ 1.17
RAB39A-201ENST00000320578 PIP4K2BP78356 416 aa22.35■■□□□ 1.17
RAB39A-201ENST00000320578 PDIA6Q15084 440 aa22.34■■□□□ 1.17
RAB39A-201ENST00000320578 SRCIN1Q9C0H9 1055 aa22.34■■□□□ 1.17
RAB39A-201ENST00000320578 ERBB4Q15303 1308 aa22.34■■□□□ 1.17
RAB39A-201ENST00000320578 HMMRO75330 724 aa22.34■■□□□ 1.17
RAB39A-201ENST00000320578 C8orf34Q49A92 452 aa22.34■■□□□ 1.17
RAB39A-201ENST00000320578 KSR2Q6VAB6 950 aa22.34■■□□□ 1.17
RAB39A-201ENST00000320578 CHD1LQ86WJ1 897 aa22.34■■□□□ 1.17
RAB39A-201ENST00000320578 DDX54Q8TDD1 881 aaKnown RBP22.34■■□□□ 1.17
RAB39A-201ENST00000320578 PRAMEF22A3QJZ6 481 aa22.33■■□□□ 1.16
RAB39A-201ENST00000320578 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.16
RAB39A-201ENST00000320578 BEND3Q5T5X7 828 aa22.33■■□□□ 1.16
RAB39A-201ENST00000320578 ADCY9O60503 1353 aa22.32■■□□□ 1.16
RAB39A-201ENST00000320578 TNS2Q63HR2 1409 aa22.32■■□□□ 1.16
RAB39A-201ENST00000320578 PI4KAP2A4QPH2 592 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms