RNA–Protein interactions for RNA: ENST00000319715.8

RBBP6-201, Transcript of RB binding protein 6, ubiquitin ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBBP6, Length 6,229 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP6-201ENST00000319715 TNNQ9UQP3 1299 aa12.12□□□□□ -0.47
RBBP6-201ENST00000319715 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
RBBP6-201ENST00000319715 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
RBBP6-201ENST00000319715 RABEP1Q15276 862 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 CCDC73Q6ZRK6 1079 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 WWC3Q9ULE0 1092 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 CCDC43Q96MW1 224 aaKnown RBP12.11□□□□□ -0.47
RBBP6-201ENST00000319715 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 ABCC1P33527 1531 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 SASS6Q6UVJ0 657 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
RBBP6-201ENST00000319715 NOC3LQ8WTT2 800 aaKnown RBP12.11□□□□□ -0.47
RBBP6-201ENST00000319715 TSPOAP1O95153 1857 aa12.11□□□□□ -0.47
RBBP6-201ENST00000319715 BRMS1Q9HCU9 246 aa12.1□□□□□ -0.47
RBBP6-201ENST00000319715 SNRKQ9NRH2 765 aa12.1□□□□□ -0.47
RBBP6-201ENST00000319715 YTHDC2Q9H6S0 1430 aaKnown RBP12.1□□□□□ -0.47
RBBP6-201ENST00000319715 IFIT1P09914 478 aaKnown RBP12.1□□□□□ -0.47
RBBP6-201ENST00000319715 XBP1P17861 261 aa12.1□□□□□ -0.47
RBBP6-201ENST00000319715 EYA1Q99502 592 aa12.1□□□□□ -0.47
RBBP6-201ENST00000319715 ATP10AO60312 1499 aa12.1□□□□□ -0.47
RBBP6-201ENST00000319715 SDF4Q9BRK5 362 aa12.1□□□□□ -0.47
RBBP6-201ENST00000319715 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
RBBP6-201ENST00000319715 MINDY4BA8MYZ0 360 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 IGHDP01880 384 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 UPF3BQ9BZI7 483 aaKnown RBP12.09□□□□□ -0.47
RBBP6-201ENST00000319715 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
RBBP6-201ENST00000319715 SLC4A8Q2Y0W8 1093 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 TSR1Q2NL82 804 aaKnown RBP12.09□□□□□ -0.47
RBBP6-201ENST00000319715 CAVIN1Q6NZI2 390 aaKnown RBP12.09□□□□□ -0.47
RBBP6-201ENST00000319715 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 AIDAQ96BJ3 306 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 AK7Q96M32 723 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 UHRF1BP1Q6BDS2 1440 aa12.09□□□□□ -0.47
RBBP6-201ENST00000319715 ATP6V1AP38606 617 aa12.08□□□□□ -0.47
RBBP6-201ENST00000319715 MEIS3Q99687 375 aa12.08□□□□□ -0.47
RBBP6-201ENST00000319715 TPM3P06753 285 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
RBBP6-201ENST00000319715 PPP1R42Q7Z4L9 355 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 CCAR2Q8N163 923 aaKnown RBP12.08□□□□□ -0.48
RBBP6-201ENST00000319715 ZNF592Q92610 1267 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 DDX11Q96FC9 970 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 PDRG1Q9NUG6 133 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 PRPF40BQ6NWY9 871 aaKnown RBP12.08□□□□□ -0.48
RBBP6-201ENST00000319715 CCDC47Q96A33 483 aaKnown RBP12.08□□□□□ -0.48
RBBP6-201ENST00000319715 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 NPATQ14207 1427 aa12.08□□□□□ -0.48
RBBP6-201ENST00000319715 TPM2P07951 284 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 LMTK3Q96Q04 1460 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 ANKRD18BA2A2Z9 1011 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 LTKP29376 864 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 RPGRQ92834 1020 aaKnown RBP12.07□□□□□ -0.48
RBBP6-201ENST00000319715 CWC25Q9NXE8 425 aaPredicted RBP12.07□□□□□ -0.48
RBBP6-201ENST00000319715 BTG4Q9NY30 223 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 RFC4P35249 363 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 DDB1Q16531 1140 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 TBX22Q9Y458 520 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 PTPRCP08575 1304 aa12.07□□□□□ -0.48
RBBP6-201ENST00000319715 K7ELQ4 463 aaPredicted RBP12.06□□□□□ -0.48
RBBP6-201ENST00000319715 RAB11FIP3O75154 756 aa12.06□□□□□ -0.48
RBBP6-201ENST00000319715 GLRX3O76003 335 aaKnown RBP12.06□□□□□ -0.48
RBBP6-201ENST00000319715 HOXC9P31274 260 aa12.06□□□□□ -0.48
RBBP6-201ENST00000319715 HOOK1Q9UJC3 728 aaKnown RBP12.06□□□□□ -0.48
RBBP6-201ENST00000319715 AKAP2Q9Y2D5 859 aa12.06□□□□□ -0.48
RBBP6-201ENST00000319715 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
RBBP6-201ENST00000319715 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
RBBP6-201ENST00000319715 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
RBBP6-201ENST00000319715 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
RBBP6-201ENST00000319715 CCDC82Q8N4S0 544 aa12.06□□□□□ -0.48
RBBP6-201ENST00000319715 TRAK2O60296 914 aa12.06□□□□□ -0.48
RBBP6-201ENST00000319715 LARP1BQ659C4 914 aaKnown RBP12.06□□□□□ -0.48
RBBP6-201ENST00000319715 AKAP4Q5JQC9 854 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 UBAC1Q9BSL1 405 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 CCAR1Q8IX12 1150 aaKnown RBP12.05□□□□□ -0.48
RBBP6-201ENST00000319715 CEP89Q96ST8 783 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
RBBP6-201ENST00000319715 USP5P45974 858 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.483e-7■■■□□ 14.6
RBBP6-201ENST00000319715 IL2RBP14784 551 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 GOLIM4O00461 696 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 PPFIA3O75145 1194 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 TPM1P09493 284 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 MCM2P49736 904 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 STK38Q15208 465 aa12.05□□□□□ -0.48
RBBP6-201ENST00000319715 ZNF622Q969S3 477 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■■■□□ 17.5
RBBP6-201ENST00000319715 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
RBBP6-201ENST00000319715 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms