RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 PCDH11YQ9BZA8 1340 aa16.11■□□□□ 0.17
PTPN6-201ENST00000318974 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
PTPN6-201ENST00000318974 MRPL50Q8N5N7 158 aaKnown RBP16.1■□□□□ 0.17
PTPN6-201ENST00000318974 DCAF5Q96JK2 942 aa16.1■□□□□ 0.17
PTPN6-201ENST00000318974 ADAMTS7Q9UKP4 1686 aa16.1■□□□□ 0.17
PTPN6-201ENST00000318974 KDM6AO15550 1401 aaPredicted RBP16.09■□□□□ 0.17
PTPN6-201ENST00000318974 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
PTPN6-201ENST00000318974 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
PTPN6-201ENST00000318974 SPATA31A6Q5VVP1 1343 aa16.09■□□□□ 0.17
PTPN6-201ENST00000318974 PLCH1Q4KWH8 1693 aa16.09■□□□□ 0.17
PTPN6-201ENST00000318974 AAMPQ13685 434 aa16.09■□□□□ 0.17
PTPN6-201ENST00000318974 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.17
PTPN6-201ENST00000318974 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
PTPN6-201ENST00000318974 SLIT2O94813 1529 aa16.07■□□□□ 0.16
PTPN6-201ENST00000318974 HSPA1LP34931 641 aa16.07■□□□□ 0.16
PTPN6-201ENST00000318974 ATF7IPQ6VMQ6 1270 aa16.07■□□□□ 0.16
PTPN6-201ENST00000318974 DZIP1LQ8IYY4 767 aaKnown RBP16.07■□□□□ 0.16
PTPN6-201ENST00000318974 SLC52A2Q9HAB3 445 aa16.07■□□□□ 0.16
PTPN6-201ENST00000318974 TNNQ9UQP3 1299 aa16.07■□□□□ 0.16
PTPN6-201ENST00000318974 DISP2A7MBM2 1401 aa16.06■□□□□ 0.16
PTPN6-201ENST00000318974 TRIM27P14373 513 aa16.06■□□□□ 0.16
PTPN6-201ENST00000318974 EIF4A1P60842 406 aaKnown RBP16.06■□□□□ 0.16
PTPN6-201ENST00000318974 ZBTB47Q9UFB7 747 aaPredicted RBP16.06■□□□□ 0.16
PTPN6-201ENST00000318974 NRAPQ86VF7 1730 aa16.06■□□□□ 0.16
PTPN6-201ENST00000318974 FTSJ3Q8IY81 847 aaKnown RBP16.06■□□□□ 0.16
PTPN6-201ENST00000318974 CLUAP1Q96AJ1 413 aa16.06■□□□□ 0.16
PTPN6-201ENST00000318974 NKX1-1Q15270 411 aaPredicted RBP16.05■□□□□ 0.16
PTPN6-201ENST00000318974 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
PTPN6-201ENST00000318974 ARHGAP45Q92619 1136 aa16.05■□□□□ 0.16
PTPN6-201ENST00000318974 COG6Q9Y2V7 657 aa16.05■□□□□ 0.16
PTPN6-201ENST00000318974 THRAP3Q9Y2W1 955 aaKnown RBP16.05■□□□□ 0.16
PTPN6-201ENST00000318974 SPATA31A1Q5TZJ5 1347 aa16.05■□□□□ 0.16
PTPN6-201ENST00000318974 KCNQ3O43525 872 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 RLBP1P12271 317 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 NGLY1Q96IV0 654 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 MRC1P22897 1456 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 KDM3BQ7LBC6 1761 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 SCN11AQ9UI33 1791 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 NWD2Q9ULI1 1742 aa16.04■□□□□ 0.16
PTPN6-201ENST00000318974 CABP4P57796 275 aa16.03■□□□□ 0.16
PTPN6-201ENST00000318974 CCDC30Q5VVM6 783 aa16.03■□□□□ 0.16
PTPN6-201ENST00000318974 SKAP1Q86WV1 359 aa16.03■□□□□ 0.16
PTPN6-201ENST00000318974 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
PTPN6-201ENST00000318974 CDCA7Q9BWT1 371 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-201ENST00000318974 HOXB7P09629 217 aa16.03■□□□□ 0.16
PTPN6-201ENST00000318974 SPATA31A5Q5VU36 1347 aa16.02■□□□□ 0.16
PTPN6-201ENST00000318974 SPATA31A7Q8IWB4 1347 aa16.02■□□□□ 0.16
PTPN6-201ENST00000318974 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
PTPN6-201ENST00000318974 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.15
PTPN6-201ENST00000318974 MVPQ14764 893 aaKnown RBP16.02■□□□□ 0.15
PTPN6-201ENST00000318974 NPM2Q86SE8 214 aaKnown RBP16.02■□□□□ 0.15
PTPN6-201ENST00000318974 STK31Q9BXU1 1019 aa16.02■□□□□ 0.15
PTPN6-201ENST00000318974 CHMP4AQ9BY43 222 aa16.02■□□□□ 0.15
PTPN6-201ENST00000318974 API5Q9BZZ5 524 aaKnown RBP16.02■□□□□ 0.15
PTPN6-201ENST00000318974 SIPA1L3O60292 1781 aaPredicted RBP16.02■□□□□ 0.15
PTPN6-201ENST00000318974 LRP6O75581 1613 aa16.02■□□□□ 0.15
PTPN6-201ENST00000318974 EXOC5O00471 708 aa16.01■□□□□ 0.15
PTPN6-201ENST00000318974 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
PTPN6-201ENST00000318974 FAM161AQ3B820 660 aa16.01■□□□□ 0.15
PTPN6-201ENST00000318974 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
PTPN6-201ENST00000318974 FNBP4Q8N3X1 1017 aaPredicted RBP16.01■□□□□ 0.15
PTPN6-201ENST00000318974 VIRMAQ69YN4 1812 aaKnown RBP16.01■□□□□ 0.15
PTPN6-201ENST00000318974 HDGFL1Q5TGJ6 251 aa16■□□□□ 0.15
PTPN6-201ENST00000318974 SHANK3Q9BYB0 1731 aa16■□□□□ 0.15
PTPN6-201ENST00000318974 HEG1Q9ULI3 1381 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 SLC39A6Q13433 755 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 TMEM57Q8N5G2 664 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 PTPRCP08575 1304 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 BCL9LQ86UU0 1499 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 VPS72Q15906 364 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 BARGINQ6ZT62 677 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 TTC5Q8N0Z6 440 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
PTPN6-201ENST00000318974 GIGYF1O75420 1035 aaPredicted RBP15.98■□□□□ 0.15
PTPN6-201ENST00000318974 IGHDP01880 384 aa15.98■□□□□ 0.15
PTPN6-201ENST00000318974 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
PTPN6-201ENST00000318974 ITPRIPQ8IWB1 547 aa15.98■□□□□ 0.15
PTPN6-201ENST00000318974 DDX19BQ9UMR2 479 aa15.98■□□□□ 0.15
PTPN6-201ENST00000318974 TNS2Q63HR2 1409 aa15.98■□□□□ 0.15
PTPN6-201ENST00000318974 EIF2S2P20042 333 aaKnown RBP15.98■□□□□ 0.15
PTPN6-201ENST00000318974 ABCC4O15439 1325 aa15.97■□□□□ 0.15
PTPN6-201ENST00000318974 C8orf34Q49A92 452 aa15.97■□□□□ 0.15
PTPN6-201ENST00000318974 DDRGK1Q96HY6 314 aa15.97■□□□□ 0.15
PTPN6-201ENST00000318974 USP21Q9UK80 565 aa15.97■□□□□ 0.15
PTPN6-201ENST00000318974 DDB1Q16531 1140 aa15.96■□□□□ 0.15
PTPN6-201ENST00000318974 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.15
PTPN6-201ENST00000318974 G2E3Q7L622 706 aa15.96■□□□□ 0.15
PTPN6-201ENST00000318974 RGS3P49796 1198 aa15.95■□□□□ 0.14
PTPN6-201ENST00000318974 FMNL2Q96PY5 1086 aa15.95■□□□□ 0.14
PTPN6-201ENST00000318974 ZNF496Q96IT1 587 aaPredicted RBP15.95■□□□□ 0.14
PTPN6-201ENST00000318974 FLIIQ13045 1269 aa15.94■□□□□ 0.14
PTPN6-201ENST00000318974 TMOD3Q9NYL9 352 aa15.94■□□□□ 0.14
PTPN6-201ENST00000318974 CHMP4BQ9H444 224 aaKnown RBP15.94■□□□□ 0.14
PTPN6-201ENST00000318974 RGS12O14924 1447 aa15.94■□□□□ 0.14
PTPN6-201ENST00000318974 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
PTPN6-201ENST00000318974 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
PTPN6-201ENST00000318974 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
PTPN6-201ENST00000318974 DBF4Q9UBU7 674 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms