RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 GLIPR1L2Q4G1C9 344 aa18.23■□□□□ 0.51
TFE3-201ENST00000315869 RPAP2Q8IXW5 612 aaPredicted RBP18.23■□□□□ 0.51
TFE3-201ENST00000315869 KLHL40Q2TBA0 621 aa18.23■□□□□ 0.51
TFE3-201ENST00000315869 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
TFE3-201ENST00000315869 UBE2Q2Q8WVN8 375 aa18.23■□□□□ 0.51
TFE3-201ENST00000315869 CCDC173Q0VFZ6 552 aa18.21■□□□□ 0.51
TFE3-201ENST00000315869 EYA1Q99502 592 aa18.21■□□□□ 0.51
TFE3-201ENST00000315869 ERC2O15083 957 aa18.21■□□□□ 0.51
TFE3-201ENST00000315869 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
TFE3-201ENST00000315869 G2E3Q7L622 706 aa18.21■□□□□ 0.51
TFE3-201ENST00000315869 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
TFE3-201ENST00000315869 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
TFE3-201ENST00000315869 ARID3AQ99856 593 aa18.2■□□□□ 0.5
TFE3-201ENST00000315869 NCOA3Q9Y6Q9 1424 aa18.2■□□□□ 0.5
TFE3-201ENST00000315869 MSH6P52701 1360 aa18.2■□□□□ 0.5
TFE3-201ENST00000315869 AK9Q5TCS8 1911 aa18.19■□□□□ 0.5
TFE3-201ENST00000315869 PTCH1Q13635 1447 aa18.19■□□□□ 0.5
TFE3-201ENST00000315869 PTMAP06454 111 aaKnown RBP18.19■□□□□ 0.5
TFE3-201ENST00000315869 ZSCAN23Q3MJ62 389 aa18.19■□□□□ 0.5
TFE3-201ENST00000315869 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
TFE3-201ENST00000315869 MPNDQ8N594 471 aa18.19■□□□□ 0.5
TFE3-201ENST00000315869 MTHFSDQ2M296 383 aaKnown RBP18.19■□□□□ 0.5
TFE3-201ENST00000315869 KIAA1211Q6ZU35 1233 aa18.19■□□□□ 0.5
TFE3-201ENST00000315869 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
TFE3-201ENST00000315869 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
TFE3-201ENST00000315869 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
TFE3-201ENST00000315869 SYCE3A1L190 88 aa18.18■□□□□ 0.5
TFE3-201ENST00000315869 LRRC59Q96AG4 307 aaKnown RBP18.18■□□□□ 0.5
TFE3-201ENST00000315869 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
TFE3-201ENST00000315869 ITSN1Q15811 1721 aa18.17■□□□□ 0.5
TFE3-201ENST00000315869 KNDC1Q76NI1 1749 aa18.17■□□□□ 0.5
TFE3-201ENST00000315869 OVOS2A0A0J9YW53 1432 aa18.17■□□□□ 0.5
TFE3-201ENST00000315869 OVOS2Q6IE36 1432 aa18.17■□□□□ 0.5
TFE3-201ENST00000315869 MCCP23508 829 aa18.16■□□□□ 0.5
TFE3-201ENST00000315869 MAP4K4O95819 1239 aaPredicted RBP18.16■□□□□ 0.5
TFE3-201ENST00000315869 ZSCAN30Q86W11 494 aa18.16■□□□□ 0.5
TFE3-201ENST00000315869 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
TFE3-201ENST00000315869 LMBRD1Q9NUN5 540 aa18.16■□□□□ 0.5
TFE3-201ENST00000315869 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
TFE3-201ENST00000315869 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
TFE3-201ENST00000315869 PDE1AP54750 535 aa18.15■□□□□ 0.5
TFE3-201ENST00000315869 RBSNQ9H1K0 784 aa18.15■□□□□ 0.5
TFE3-201ENST00000315869 GDPD2Q9HCC8 539 aa18.15■□□□□ 0.5
TFE3-201ENST00000315869 R3HCC1Q9Y3T6 440 aaKnown RBP18.15■□□□□ 0.5
TFE3-201ENST00000315869 CWC22Q9HCG8 908 aaKnown RBP18.15■□□□□ 0.5
TFE3-201ENST00000315869 CHL1O00533 1208 aa18.14■□□□□ 0.5
TFE3-201ENST00000315869 HOXC9P31274 260 aa18.14■□□□□ 0.5
TFE3-201ENST00000315869 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.5
TFE3-201ENST00000315869 GNAI2P04899 355 aa18.14■□□□□ 0.49
TFE3-201ENST00000315869 PLCB2Q00722 1185 aa18.14■□□□□ 0.49
TFE3-201ENST00000315869 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.49
TFE3-201ENST00000315869 PIK3R4Q99570 1358 aa18.14■□□□□ 0.49
TFE3-201ENST00000315869 NPHP4O75161 1426 aaPredicted RBP18.14■□□□□ 0.49
TFE3-201ENST00000315869 TTC21AQ8NDW8 1320 aa18.13■□□□□ 0.49
TFE3-201ENST00000315869 RTL1A6NKG5 1358 aa18.13■□□□□ 0.49
TFE3-201ENST00000315869 MON2Q7Z3U7 1717 aa18.13■□□□□ 0.49
TFE3-201ENST00000315869 TMX3Q96JJ7 454 aa18.13■□□□□ 0.49
TFE3-201ENST00000315869 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
TFE3-201ENST00000315869 LRRCC1Q9C099 1032 aa18.11■□□□□ 0.49
TFE3-201ENST00000315869 DTNBO60941 627 aa18.11■□□□□ 0.49
TFE3-201ENST00000315869 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
TFE3-201ENST00000315869 SSH2Q76I76 1423 aa18.11■□□□□ 0.49
TFE3-201ENST00000315869 AKAP12Q02952 1782 aa18.11■□□□□ 0.49
TFE3-201ENST00000315869 PTPRCP08575 1304 aa18.1■□□□□ 0.49
TFE3-201ENST00000315869 GPT2Q8TD30 523 aa18.1■□□□□ 0.49
TFE3-201ENST00000315869 FLT4P35916 1363 aa18.1■□□□□ 0.49
TFE3-201ENST00000315869 DNTTIP2Q5QJE6 756 aaKnown RBP18.1■□□□□ 0.49
TFE3-201ENST00000315869 NSFL1CQ9UNZ2 370 aaKnown RBP18.1■□□□□ 0.49
TFE3-201ENST00000315869 MX1P20591 662 aa18.1■□□□□ 0.49
TFE3-201ENST00000315869 CCT4P50991 539 aaKnown RBP18.1■□□□□ 0.49
TFE3-201ENST00000315869 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
TFE3-201ENST00000315869 FAM13BQ9NYF5 915 aa18.1■□□□□ 0.49
TFE3-201ENST00000315869 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
TFE3-201ENST00000315869 TMEM63CQ9P1W3 806 aa18.09■□□□□ 0.49
TFE3-201ENST00000315869 PALD1Q9ULE6 856 aa18.09■□□□□ 0.49
TFE3-201ENST00000315869 LRRFIP2Q9Y608 721 aaKnown RBP18.08■□□□□ 0.49
TFE3-201ENST00000315869 OS9Q13438 667 aaPredicted RBP18.08■□□□□ 0.48
TFE3-201ENST00000315869 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.48
TFE3-201ENST00000315869 NBPF4Q96M43 638 aa18.08■□□□□ 0.48
TFE3-201ENST00000315869 PNMA6EA0A0J9YXQ4 647 aa18.08■□□□□ 0.48
TFE3-201ENST00000315869 ZDHHC9Q9Y397 364 aa18.08■□□□□ 0.48
TFE3-201ENST00000315869 KRT28Q7Z3Y7 464 aa18.07■□□□□ 0.48
TFE3-201ENST00000315869 SBNO1A3KN83 1393 aa18.07■□□□□ 0.48
TFE3-201ENST00000315869 USP31Q70CQ4 1352 aa18.07■□□□□ 0.48
TFE3-201ENST00000315869 FLIIQ13045 1269 aa18.07■□□□□ 0.48
TFE3-201ENST00000315869 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
TFE3-201ENST00000315869 ZNF445P59923 1031 aa18.07■□□□□ 0.48
TFE3-201ENST00000315869 ESYT1Q9BSJ8 1104 aa18.07■□□□□ 0.48
TFE3-201ENST00000315869 RRP9O43818 475 aaKnown RBP18.06■□□□□ 0.48
TFE3-201ENST00000315869 PPP1R9BQ96SB3 815 aa18.06■□□□□ 0.48
TFE3-201ENST00000315869 ATF3P18847 181 aa18.06■□□□□ 0.48
TFE3-201ENST00000315869 GNAI3P08754 354 aa18.05■□□□□ 0.48
TFE3-201ENST00000315869 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.05■□□□□ 0.48
TFE3-201ENST00000315869 GCP02774 474 aa18.05■□□□□ 0.48
TFE3-201ENST00000315869 UBTFL1P0CB47 393 aaPredicted RBP18.05■□□□□ 0.48
TFE3-201ENST00000315869 CHRNA2Q15822 529 aa18.05■□□□□ 0.48
TFE3-201ENST00000315869 ATP10DQ9P241 1426 aa18.05■□□□□ 0.48
TFE3-201ENST00000315869 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
TFE3-201ENST00000315869 A0A0G2JS52 829 aa18.04■□□□□ 0.48
TFE3-201ENST00000315869 CCDC30Q5VVM6 783 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms