RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 AMOTL1Q8IY63 956 aa16.52■□□□□ 0.24
DDX54-202ENST00000314045 ATP5J2-PTCD1G3V325 749 aa16.52■□□□□ 0.24
DDX54-202ENST00000314045 TTC39AQ5SRH9 613 aa16.52■□□□□ 0.24
DDX54-202ENST00000314045 MEIS3Q99687 375 aa16.52■□□□□ 0.24
DDX54-202ENST00000314045 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
DDX54-202ENST00000314045 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.24
DDX54-202ENST00000314045 CLTCL1P53675 1640 aa16.52■□□□□ 0.23
DDX54-202ENST00000314045 RLBP1P12271 317 aa16.52■□□□□ 0.23
DDX54-202ENST00000314045 CROCC2H7BZ55 1655 aa16.52■□□□□ 0.23
DDX54-202ENST00000314045 RAB11FIP3O75154 756 aa16.52■□□□□ 0.23
DDX54-202ENST00000314045 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.23
DDX54-202ENST00000314045 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
DDX54-202ENST00000314045 SF3A1Q15459 793 aaKnown RBP16.51■□□□□ 0.23
DDX54-202ENST00000314045 AKAP17AQ02040 695 aaKnown RBP16.51■□□□□ 0.23
DDX54-202ENST00000314045 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
DDX54-202ENST00000314045 PRR36Q9H6K5 1346 aa16.51■□□□□ 0.23
DDX54-202ENST00000314045 MX1P20591 662 aa16.51■□□□□ 0.23
DDX54-202ENST00000314045 SMC3Q9UQE7 1217 aa16.51■□□□□ 0.23
DDX54-202ENST00000314045 RNF17Q9BXT8 1623 aaKnown RBP16.5■□□□□ 0.23
DDX54-202ENST00000314045 RABEP1Q15276 862 aa16.5■□□□□ 0.23
DDX54-202ENST00000314045 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
DDX54-202ENST00000314045 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
DDX54-202ENST00000314045 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
DDX54-202ENST00000314045 TMEM94Q12767 1356 aa16.5■□□□□ 0.23
DDX54-202ENST00000314045 MCTP1Q6DN14 999 aa16.5■□□□□ 0.23
DDX54-202ENST00000314045 COPS6Q7L5N1 327 aa16.5■□□□□ 0.23
DDX54-202ENST00000314045 PSMA5P28066 241 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 ZNF652Q9Y2D9 606 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 GPTP24298 496 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
DDX54-202ENST00000314045 FKBP4Q02790 459 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX54-202ENST00000314045 HSP90AB3PQ58FF7 597 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 BTG4Q9NY30 223 aa16.49■□□□□ 0.23
DDX54-202ENST00000314045 TRMT112Q9UI30 125 aaKnown RBP16.49■□□□□ 0.23
DDX54-202ENST00000314045 GLRX3O76003 335 aaKnown RBP16.48■□□□□ 0.23
DDX54-202ENST00000314045 DDB1Q16531 1140 aa16.48■□□□□ 0.23
DDX54-202ENST00000314045 C8orf37Q96NL8 207 aa16.48■□□□□ 0.23
DDX54-202ENST00000314045 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
DDX54-202ENST00000314045 NUCB2P80303 420 aa16.48■□□□□ 0.23
DDX54-202ENST00000314045 INSRP06213 1382 aa16.48■□□□□ 0.23
DDX54-202ENST00000314045 DNTTIP2Q5QJE6 756 aaKnown RBP16.48■□□□□ 0.23
DDX54-202ENST00000314045 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
DDX54-202ENST00000314045 NFXL1Q6ZNB6 911 aa16.47■□□□□ 0.23
DDX54-202ENST00000314045 FAM135BQ49AJ0 1406 aa16.47■□□□□ 0.23
DDX54-202ENST00000314045 VPS37CA5D8V6 355 aaPredicted RBP16.47■□□□□ 0.23
DDX54-202ENST00000314045 CHL1O00533 1208 aa16.47■□□□□ 0.23
DDX54-202ENST00000314045 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
DDX54-202ENST00000314045 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
DDX54-202ENST00000314045 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
DDX54-202ENST00000314045 CWC27Q6UX04 472 aaKnown RBP16.47■□□□□ 0.23
DDX54-202ENST00000314045 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
DDX54-202ENST00000314045 GOLGA6L3A6NEY3 463 aa16.46■□□□□ 0.23
DDX54-202ENST00000314045 ZPR1O75312 459 aa16.46■□□□□ 0.23
DDX54-202ENST00000314045 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
DDX54-202ENST00000314045 JARID2Q92833 1246 aaPredicted RBP16.46■□□□□ 0.23
DDX54-202ENST00000314045 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
DDX54-202ENST00000314045 KSR2Q6VAB6 950 aa16.46■□□□□ 0.23
DDX54-202ENST00000314045 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.46■□□□□ 0.237e-7■■□□□ 13.5
DDX54-202ENST00000314045 GOLGA6L6A8MZA4 724 aa16.45■□□□□ 0.22
DDX54-202ENST00000314045 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
DDX54-202ENST00000314045 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
DDX54-202ENST00000314045 LGR6Q9HBX8 967 aa16.45■□□□□ 0.22
DDX54-202ENST00000314045 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
DDX54-202ENST00000314045 ERICH2A1L162 156 aa16.45■□□□□ 0.22
DDX54-202ENST00000314045 CCDC8Q9H0W5 538 aaPredicted RBP16.45■□□□□ 0.22
DDX54-202ENST00000314045 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
DDX54-202ENST00000314045 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
DDX54-202ENST00000314045 MCM2P49736 904 aa16.45■□□□□ 0.22
DDX54-202ENST00000314045 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
DDX54-202ENST00000314045 CCDC34Q96HJ3 373 aa16.45■□□□□ 0.22
DDX54-202ENST00000314045 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
DDX54-202ENST00000314045 NRDCO43847 1150 aa16.44■□□□□ 0.22
DDX54-202ENST00000314045 BOLA2Q9H3K6 86 aa16.44■□□□□ 0.22
DDX54-202ENST00000314045 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
DDX54-202ENST00000314045 RTN4Q9NQC3 1192 aaKnown RBP16.44■□□□□ 0.22
DDX54-202ENST00000314045 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
DDX54-202ENST00000314045 TRIM29Q14134 588 aa16.43■□□□□ 0.22
DDX54-202ENST00000314045 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
DDX54-202ENST00000314045 ALDH1L1O75891 902 aa16.43■□□□□ 0.22
DDX54-202ENST00000314045 SKOR2Q2VWA4 1001 aaPredicted RBP16.43■□□□□ 0.22
DDX54-202ENST00000314045 ATP7BP35670 1465 aa16.43■□□□□ 0.22
DDX54-202ENST00000314045 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 ZMYM4Q5VZL5 1548 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 AKAP2Q9Y2D5 859 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 SYNMO15061 1565 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 LINS1Q8NG48 757 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
DDX54-202ENST00000314045 RAD21O60216 631 aa16.41■□□□□ 0.22
DDX54-202ENST00000314045 HMGB2P26583 209 aaKnown RBP16.41■□□□□ 0.22
DDX54-202ENST00000314045 G2E3Q7L622 706 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms