RNA–Protein interactions for RNA: ENST00000311604.7

LSP1-201, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LSP1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-201ENST00000311604 LARP1Q6PKG0 1096 aaKnown RBP22.42■■□□□ 1.18
LSP1-201ENST00000311604 ARHGAP45Q92619 1136 aa22.42■■□□□ 1.18
LSP1-201ENST00000311604 CARD10Q9BWT7 1032 aa22.42■■□□□ 1.18
LSP1-201ENST00000311604 MRC1P22897 1456 aa22.42■■□□□ 1.18
LSP1-201ENST00000311604 KCNQ3O43525 872 aa22.42■■□□□ 1.18
LSP1-201ENST00000311604 ILDR1Q86SU0 546 aaPredicted RBP22.42■■□□□ 1.18
LSP1-201ENST00000311604 TMEM57Q8N5G2 664 aa22.42■■□□□ 1.18
LSP1-201ENST00000311604 CACNA1FO60840 1977 aa22.41■■□□□ 1.18
LSP1-201ENST00000311604 PLCH1Q4KWH8 1693 aa22.41■■□□□ 1.18
LSP1-201ENST00000311604 IPO8O15397 1037 aaKnown RBP22.4■■□□□ 1.18
LSP1-201ENST00000311604 TOM1L2Q6ZVM7 507 aa22.4■■□□□ 1.18
LSP1-201ENST00000311604 ABCC4O15439 1325 aa22.4■■□□□ 1.18
LSP1-201ENST00000311604 MS4A1P11836 297 aa22.39■■□□□ 1.18
LSP1-201ENST00000311604 EIF4A1P60842 406 aaKnown RBP22.39■■□□□ 1.18
LSP1-201ENST00000311604 PELP1Q8IZL8 1130 aaKnown RBP22.39■■□□□ 1.18
LSP1-201ENST00000311604 FNBP4Q8N3X1 1017 aaPredicted RBP22.39■■□□□ 1.18
LSP1-201ENST00000311604 SPG7Q9UQ90 795 aa22.39■■□□□ 1.18
LSP1-201ENST00000311604 NRAPQ86VF7 1730 aa22.39■■□□□ 1.18
LSP1-201ENST00000311604 FTSJ3Q8IY81 847 aaKnown RBP22.39■■□□□ 1.17
LSP1-201ENST00000311604 SLIT2O94813 1529 aa22.38■■□□□ 1.17
LSP1-201ENST00000311604 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
LSP1-201ENST00000311604 PCDHB15Q9Y5E8 787 aa22.38■■□□□ 1.17
LSP1-201ENST00000311604 HEG1Q9ULI3 1381 aa22.38■■□□□ 1.17
LSP1-201ENST00000311604 TEFQ10587 303 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 UNC5CLQ8IV45 518 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 IFNL2Q8IZJ0 200 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 TSHZ2Q9NRE2 1034 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 USP21Q9UK80 565 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
LSP1-201ENST00000311604 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 IGHDP01880 384 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 AAMPQ13685 434 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 AFF2P51816 1311 aa22.36■■□□□ 1.17
LSP1-201ENST00000311604 BCL9LQ86UU0 1499 aa22.35■■□□□ 1.17
LSP1-201ENST00000311604 G2E3Q7L622 706 aa22.35■■□□□ 1.17
LSP1-201ENST00000311604 DISP2A7MBM2 1401 aa22.35■■□□□ 1.17
LSP1-201ENST00000311604 BTBD11A6QL63 1104 aa22.34■■□□□ 1.17
LSP1-201ENST00000311604 GLI3P10071 1580 aa22.34■■□□□ 1.17
LSP1-201ENST00000311604 ITPRIPQ8IWB1 547 aa22.33■■□□□ 1.17
LSP1-201ENST00000311604 DDX19BQ9UMR2 479 aa22.33■■□□□ 1.17
LSP1-201ENST00000311604 CCDC9Q9Y3X0 531 aaKnown RBP22.33■■□□□ 1.17
LSP1-201ENST00000311604 IL2RBP14784 551 aa22.33■■□□□ 1.16
LSP1-201ENST00000311604 CENPQQ7L2Z9 268 aaPredicted RBP22.33■■□□□ 1.16
LSP1-201ENST00000311604 SLC52A2Q9HAB3 445 aa22.33■■□□□ 1.16
LSP1-201ENST00000311604 ZBTB40Q9NUA8 1239 aa22.33■■□□□ 1.16
LSP1-201ENST00000311604 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
LSP1-201ENST00000311604 C5P01031 1676 aa22.32■■□□□ 1.16
LSP1-201ENST00000311604 SLC4A2P04920 1241 aa22.32■■□□□ 1.16
LSP1-201ENST00000311604 SKAP1Q86WV1 359 aa22.32■■□□□ 1.16
LSP1-201ENST00000311604 API5Q9BZZ5 524 aaKnown RBP22.32■■□□□ 1.16
LSP1-201ENST00000311604 ZCRB1Q8TBF4 217 aaKnown RBP22.31■■□□□ 1.16
LSP1-201ENST00000311604 N4BP2Q86UW6 1770 aaPredicted RBP22.31■■□□□ 1.16
LSP1-201ENST00000311604 DCAF5Q96JK2 942 aa22.3■■□□□ 1.16
LSP1-201ENST00000311604 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
LSP1-201ENST00000311604 PTPRCP08575 1304 aa22.3■■□□□ 1.16
LSP1-201ENST00000311604 ZBTB7BO15156 539 aaPredicted RBP22.3■■□□□ 1.16
LSP1-201ENST00000311604 HOXB7P09629 217 aa22.3■■□□□ 1.16
LSP1-201ENST00000311604 PCDH11XQ9BZA7 1347 aa22.29■■□□□ 1.16
LSP1-201ENST00000311604 PCDH11YQ9BZA8 1340 aa22.29■■□□□ 1.16
LSP1-201ENST00000311604 NKX1-1Q15270 411 aaPredicted RBP22.29■■□□□ 1.16
LSP1-201ENST00000311604 SPATA31A1Q5TZJ5 1347 aa22.28■■□□□ 1.16
LSP1-201ENST00000311604 VPS72Q15906 364 aa22.28■■□□□ 1.16
LSP1-201ENST00000311604 CCDC30Q5VVM6 783 aa22.28■■□□□ 1.16
LSP1-201ENST00000311604 NECTIN2Q92692 538 aa22.28■■□□□ 1.16
LSP1-201ENST00000311604 PAPPAQ13219 1627 aa22.28■■□□□ 1.16
LSP1-201ENST00000311604 SPATA31A5Q5VU36 1347 aa22.27■■□□□ 1.16
LSP1-201ENST00000311604 SPATA31A7Q8IWB4 1347 aa22.27■■□□□ 1.16
LSP1-201ENST00000311604 INTS3Q68E01 1043 aaKnown RBP22.27■■□□□ 1.16
LSP1-201ENST00000311604 NFATC2IPQ8NCF5 419 aa22.27■■□□□ 1.16
LSP1-201ENST00000311604 GIGYF1O75420 1035 aaPredicted RBP22.26■■□□□ 1.15
LSP1-201ENST00000311604 UBR2Q8IWV8 1755 aa22.26■■□□□ 1.15
LSP1-201ENST00000311604 PRAMEF22A3QJZ6 481 aa22.26■■□□□ 1.15
LSP1-201ENST00000311604 HSP90AB1P08238 724 aaKnown RBP22.26■■□□□ 1.15
LSP1-201ENST00000311604 SLC39A6Q13433 755 aa22.26■■□□□ 1.15
LSP1-201ENST00000311604 HDGFL1Q5TGJ6 251 aa22.26■■□□□ 1.15
LSP1-201ENST00000311604 QTRT2Q9H974 415 aaKnown RBP22.26■■□□□ 1.15
LSP1-201ENST00000311604 ZNF790Q6PG37 636 aa22.25■■□□□ 1.15
LSP1-201ENST00000311604 FLIIQ13045 1269 aa22.23■■□□□ 1.15
LSP1-201ENST00000311604 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
LSP1-201ENST00000311604 TRPC5Q9UL62 973 aaPredicted RBP22.23■■□□□ 1.15
LSP1-201ENST00000311604 F6X3S4 739 aa22.22■■□□□ 1.15
LSP1-201ENST00000311604 GJD4Q96KN9 370 aaPredicted RBP22.22■■□□□ 1.15
LSP1-201ENST00000311604 EIF2S2P20042 333 aaKnown RBP22.21■■□□□ 1.15
LSP1-201ENST00000311604 PHAXQ9H814 394 aaKnown RBP22.21■■□□□ 1.15
LSP1-201ENST00000311604 THRAP3Q9Y2W1 955 aaKnown RBP22.21■■□□□ 1.15
LSP1-201ENST00000311604 FAM98CQ17RN3 349 aaKnown RBP22.2■■□□□ 1.15
LSP1-201ENST00000311604 CHPF2Q9P2E5 772 aa22.2■■□□□ 1.15
LSP1-201ENST00000311604 RGS17Q9UGC6 210 aaPredicted RBP22.2■■□□□ 1.15
LSP1-201ENST00000311604 ITGB4P16144 1822 aa22.2■■□□□ 1.14
LSP1-201ENST00000311604 HDAC1Q13547 482 aaPredicted RBP22.2■■□□□ 1.14
LSP1-201ENST00000311604 ZNF772Q68DY9 489 aaPredicted RBP22.2■■□□□ 1.14
LSP1-201ENST00000311604 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.14
LSP1-201ENST00000311604 LAMB4A4D0S4 1761 aa22.19■■□□□ 1.14
LSP1-201ENST00000311604 KCPQ6ZWJ8 1503 aa22.19■■□□□ 1.14
LSP1-201ENST00000311604 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.19■■□□□ 1.14
LSP1-201ENST00000311604 ATRNO75882 1429 aa22.19■■□□□ 1.14
LSP1-201ENST00000311604 ERVV-2B6SEH9 535 aa22.19■■□□□ 1.14
LSP1-201ENST00000311604 DDX54Q8TDD1 881 aaKnown RBP22.19■■□□□ 1.14
LSP1-201ENST00000311604 CABP4P57796 275 aa22.18■■□□□ 1.14
LSP1-201ENST00000311604 PROSER3Q2NL68 480 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms