RNA–Protein interactions for RNA: ENST00000310614.11

MRPL48-201, Transcript of mitochondrial ribosomal protein L48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL48, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-201ENST00000310614 CHL1O00533 1208 aa16.55■□□□□ 0.24
MRPL48-201ENST00000310614 CABP4P57796 275 aa16.55■□□□□ 0.24
MRPL48-201ENST00000310614 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
MRPL48-201ENST00000310614 GLI3P10071 1580 aa16.54■□□□□ 0.24
MRPL48-201ENST00000310614 ADAMTS7Q9UKP4 1686 aa16.54■□□□□ 0.24
MRPL48-201ENST00000310614 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
MRPL48-201ENST00000310614 SHANK3Q9BYB0 1731 aa16.53■□□□□ 0.24
MRPL48-201ENST00000310614 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
MRPL48-201ENST00000310614 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
MRPL48-201ENST00000310614 RBM6P78332 1123 aaKnown RBP16.53■□□□□ 0.24
MRPL48-201ENST00000310614 MRC1P22897 1456 aa16.52■□□□□ 0.24
MRPL48-201ENST00000310614 THSD7AQ9UPZ6 1657 aa16.51■□□□□ 0.23
MRPL48-201ENST00000310614 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
MRPL48-201ENST00000310614 EXOSC9Q06265 439 aaKnown RBP16.51■□□□□ 0.23
MRPL48-201ENST00000310614 RCAN3Q9UKA8 241 aa16.51■□□□□ 0.23
MRPL48-201ENST00000310614 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
MRPL48-201ENST00000310614 SEPT12Q8IYM1 358 aa16.5■□□□□ 0.23
MRPL48-201ENST00000310614 NFATC2IPQ8NCF5 419 aa16.5■□□□□ 0.23
MRPL48-201ENST00000310614 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
MRPL48-201ENST00000310614 IRX6P78412 446 aaPredicted RBP16.5■□□□□ 0.23
MRPL48-201ENST00000310614 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
MRPL48-201ENST00000310614 MARCH10Q8NA82 808 aaPredicted RBP16.5■□□□□ 0.23
MRPL48-201ENST00000310614 TMOD3Q9NYL9 352 aa16.5■□□□□ 0.23
MRPL48-201ENST00000310614 RXRBP28702 533 aa16.49■□□□□ 0.23
MRPL48-201ENST00000310614 ZNF428Q96B54 188 aa16.48■□□□□ 0.23
MRPL48-201ENST00000310614 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
MRPL48-201ENST00000310614 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
MRPL48-201ENST00000310614 CHMP4AQ9BY43 222 aa16.47■□□□□ 0.23
MRPL48-201ENST00000310614 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
MRPL48-201ENST00000310614 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
MRPL48-201ENST00000310614 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
MRPL48-201ENST00000310614 SIPA1L3O60292 1781 aaPredicted RBP16.45■□□□□ 0.22
MRPL48-201ENST00000310614 VIRMAQ69YN4 1812 aaKnown RBP16.45■□□□□ 0.22
MRPL48-201ENST00000310614 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
MRPL48-201ENST00000310614 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
MRPL48-201ENST00000310614 ELL2O00472 640 aaPredicted RBP16.44■□□□□ 0.22
MRPL48-201ENST00000310614 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
MRPL48-201ENST00000310614 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
MRPL48-201ENST00000310614 TOGARAM1Q9Y4F4 1720 aa16.43■□□□□ 0.22
MRPL48-201ENST00000310614 HOXB7P09629 217 aa16.43■□□□□ 0.22
MRPL48-201ENST00000310614 PRIM1P49642 420 aaKnown RBP16.43■□□□□ 0.22
MRPL48-201ENST00000310614 SLC39A6Q13433 755 aa16.43■□□□□ 0.22
MRPL48-201ENST00000310614 ACSBG1Q96GR2 724 aa16.43■□□□□ 0.22
MRPL48-201ENST00000310614 FMNL2Q96PY5 1086 aa16.43■□□□□ 0.22
MRPL48-201ENST00000310614 VAMP4O75379 141 aa16.42■□□□□ 0.22
MRPL48-201ENST00000310614 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
MRPL48-201ENST00000310614 ALDH1L2Q3SY69 923 aa16.42■□□□□ 0.22
MRPL48-201ENST00000310614 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
MRPL48-201ENST00000310614 TSPYL6Q8N831 410 aa16.42■□□□□ 0.22
MRPL48-201ENST00000310614 PIGBQ92521 554 aa16.42■□□□□ 0.22
MRPL48-201ENST00000310614 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
MRPL48-201ENST00000310614 BCL9O00512 1426 aa16.42■□□□□ 0.22
MRPL48-201ENST00000310614 DOT1LQ8TEK3 1739 aa16.42■□□□□ 0.22
MRPL48-201ENST00000310614 KCNQ3O43525 872 aa16.41■□□□□ 0.22
MRPL48-201ENST00000310614 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
MRPL48-201ENST00000310614 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
MRPL48-201ENST00000310614 RGS17Q9UGC6 210 aaPredicted RBP16.4■□□□□ 0.22
MRPL48-201ENST00000310614 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
MRPL48-201ENST00000310614 FAM196AQ6ZSG2 479 aa16.4■□□□□ 0.22
MRPL48-201ENST00000310614 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
MRPL48-201ENST00000310614 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
MRPL48-201ENST00000310614 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
MRPL48-201ENST00000310614 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
MRPL48-201ENST00000310614 POTEAQ6S8J7 498 aa16.39■□□□□ 0.21
MRPL48-201ENST00000310614 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
MRPL48-201ENST00000310614 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
MRPL48-201ENST00000310614 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
MRPL48-201ENST00000310614 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
MRPL48-201ENST00000310614 SSH1Q8WYL5 1049 aa16.38■□□□□ 0.21
MRPL48-201ENST00000310614 BCL2L13Q9BXK5 485 aa16.38■□□□□ 0.21
MRPL48-201ENST00000310614 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
MRPL48-201ENST00000310614 HEG1Q9ULI3 1381 aa16.37■□□□□ 0.21
MRPL48-201ENST00000310614 BCAR3O75815 825 aa16.37■□□□□ 0.21
MRPL48-201ENST00000310614 B4GALNT3Q6L9W6 998 aa16.37■□□□□ 0.21
MRPL48-201ENST00000310614 ERICH6Q7L0X2 663 aa16.37■□□□□ 0.21
MRPL48-201ENST00000310614 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
MRPL48-201ENST00000310614 ASAP1Q9ULH1 1129 aa16.37■□□□□ 0.21
MRPL48-201ENST00000310614 RGS12O14924 1447 aa16.37■□□□□ 0.21
MRPL48-201ENST00000310614 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
MRPL48-201ENST00000310614 EIF2S2P20042 333 aaKnown RBP16.36■□□□□ 0.21
MRPL48-201ENST00000310614 ITGB4P16144 1822 aa16.36■□□□□ 0.21
MRPL48-201ENST00000310614 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
MRPL48-201ENST00000310614 FAM182BQ5T319 152 aa16.35■□□□□ 0.21
MRPL48-201ENST00000310614 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
MRPL48-201ENST00000310614 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
MRPL48-201ENST00000310614 RBM42Q9BTD8 480 aaKnown RBP16.35■□□□□ 0.21
MRPL48-201ENST00000310614 TEX13AQ9BXU3 409 aaPredicted RBP16.35■□□□□ 0.21
MRPL48-201ENST00000310614 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
MRPL48-201ENST00000310614 KCNQ2O43526 872 aa16.35■□□□□ 0.21
MRPL48-201ENST00000310614 BRPF1P55201 1214 aaPredicted RBP16.35■□□□□ 0.21
MRPL48-201ENST00000310614 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
MRPL48-201ENST00000310614 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
MRPL48-201ENST00000310614 MS4A1P11836 297 aa16.34■□□□□ 0.21
MRPL48-201ENST00000310614 MRPL50Q8N5N7 158 aaKnown RBP16.34■□□□□ 0.21
MRPL48-201ENST00000310614 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
MRPL48-201ENST00000310614 PALLDQ8WX93 1383 aa16.33■□□□□ 0.21
MRPL48-201ENST00000310614 UBR2Q8IWV8 1755 aa16.33■□□□□ 0.2
MRPL48-201ENST00000310614 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
MRPL48-201ENST00000310614 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.2
MRPL48-201ENST00000310614 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms