RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
SSSCA1-201ENST00000309328 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.34
SSSCA1-201ENST00000309328 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
SSSCA1-201ENST00000309328 SLC27A3Q5K4L6 730 aa23.44■■□□□ 1.34
SSSCA1-201ENST00000309328 RGPD3A6NKT7 1758 aaPredicted RBP23.44■■□□□ 1.34
SSSCA1-201ENST00000309328 RGPD4Q7Z3J3 1758 aa23.44■■□□□ 1.34
SSSCA1-201ENST00000309328 PALLDQ8WX93 1383 aa23.43■■□□□ 1.34
SSSCA1-201ENST00000309328 PTF1AQ7RTS3 328 aa23.43■■□□□ 1.34
SSSCA1-201ENST00000309328 TRIM35Q9UPQ4 493 aa23.43■■□□□ 1.34
SSSCA1-201ENST00000309328 TTC5Q8N0Z6 440 aa23.42■■□□□ 1.34
SSSCA1-201ENST00000309328 BTAF1O14981 1849 aa23.41■■□□□ 1.34
SSSCA1-201ENST00000309328 BTBD11A6QL63 1104 aa23.41■■□□□ 1.34
SSSCA1-201ENST00000309328 DCTN1Q14203 1278 aa23.41■■□□□ 1.34
SSSCA1-201ENST00000309328 CAMKK2Q96RR4 588 aa23.41■■□□□ 1.34
SSSCA1-201ENST00000309328 ATG3Q9NT62 314 aa23.41■■□□□ 1.34
SSSCA1-201ENST00000309328 EN1Q05925 392 aaPredicted RBP23.4■■□□□ 1.34
SSSCA1-201ENST00000309328 KAT6BQ8WYB5 2073 aa23.4■■□□□ 1.34
SSSCA1-201ENST00000309328 ITGB4P16144 1822 aa23.4■■□□□ 1.34
SSSCA1-201ENST00000309328 ZNF790Q6PG37 636 aa23.39■■□□□ 1.33
SSSCA1-201ENST00000309328 ASAP1Q9ULH1 1129 aa23.39■■□□□ 1.33
SSSCA1-201ENST00000309328 TXNRD1Q16881 649 aa23.38■■□□□ 1.33
SSSCA1-201ENST00000309328 DEFB132Q7Z7B7 95 aa23.38■■□□□ 1.33
SSSCA1-201ENST00000309328 LOC102724428A0A0B4J2F2 783 aa23.37■■□□□ 1.33
SSSCA1-201ENST00000309328 SIK1P57059 783 aa23.37■■□□□ 1.33
SSSCA1-201ENST00000309328 WDR63Q8IWG1 891 aa23.37■■□□□ 1.33
SSSCA1-201ENST00000309328 WWC1Q8IX03 1113 aa23.37■■□□□ 1.33
SSSCA1-201ENST00000309328 VSIG10Q8N0Z9 540 aa23.37■■□□□ 1.33
SSSCA1-201ENST00000309328 DLG5Q8TDM6 1919 aa23.37■■□□□ 1.33
SSSCA1-201ENST00000309328 IL16Q14005 1332 aa23.36■■□□□ 1.33
SSSCA1-201ENST00000309328 CFAP44Q96MT7 982 aa23.36■■□□□ 1.33
SSSCA1-201ENST00000309328 IFT57Q9NWB7 429 aa23.36■■□□□ 1.33
SSSCA1-201ENST00000309328 CCNL1Q9UK58 526 aaPredicted RBP23.36■■□□□ 1.33
SSSCA1-201ENST00000309328 GNAI1P63096 354 aa23.35■■□□□ 1.33
SSSCA1-201ENST00000309328 EZH2Q15910 746 aaKnown RBP23.35■■□□□ 1.33
SSSCA1-201ENST00000309328 FMNL2Q96PY5 1086 aa23.35■■□□□ 1.33
SSSCA1-201ENST00000309328 THUMPD2Q9BTF0 503 aaKnown RBP23.35■■□□□ 1.33
SSSCA1-201ENST00000309328 TSPYL4Q9UJ04 414 aa23.34■■□□□ 1.33
SSSCA1-201ENST00000309328 TEX13AQ9BXU3 409 aaPredicted RBP23.33■■□□□ 1.33
SSSCA1-201ENST00000309328 SIPA1L3O60292 1781 aaPredicted RBP23.32■■□□□ 1.32
SSSCA1-201ENST00000309328 CHL1O00533 1208 aa23.32■■□□□ 1.32
SSSCA1-201ENST00000309328 SLC39A6Q13433 755 aa23.32■■□□□ 1.32
SSSCA1-201ENST00000309328 RBM42Q9BTD8 480 aaKnown RBP23.32■■□□□ 1.32
SSSCA1-201ENST00000309328 PAPPAQ13219 1627 aa23.32■■□□□ 1.32
SSSCA1-201ENST00000309328 ATP6V1AP38606 617 aa23.31■■□□□ 1.32
SSSCA1-201ENST00000309328 NBPF14Q5TI25 921 aa23.31■■□□□ 1.32
SSSCA1-201ENST00000309328 PROM2Q8N271 834 aa23.31■■□□□ 1.32
SSSCA1-201ENST00000309328 VIRMAQ69YN4 1812 aaKnown RBP23.31■■□□□ 1.32
SSSCA1-201ENST00000309328 LY75O60449 1722 aa23.3■■□□□ 1.32
SSSCA1-201ENST00000309328 ZNF831Q5JPB2 1677 aa23.3■■□□□ 1.32
SSSCA1-201ENST00000309328 PTCD1O75127 700 aaKnown RBP23.3■■□□□ 1.32
SSSCA1-201ENST00000309328 HEG1Q9ULI3 1381 aa23.29■■□□□ 1.32
SSSCA1-201ENST00000309328 ZNF853P0CG23 659 aa23.29■■□□□ 1.32
SSSCA1-201ENST00000309328 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
SSSCA1-201ENST00000309328 SNRPA1P09661 255 aaKnown RBP23.28■■□□□ 1.32
SSSCA1-201ENST00000309328 ZNF496Q96IT1 587 aaPredicted RBP23.28■■□□□ 1.32
SSSCA1-201ENST00000309328 ZNF521Q96K83 1311 aa23.28■■□□□ 1.32
SSSCA1-201ENST00000309328 STARD3NLO95772 234 aa23.27■■□□□ 1.32
SSSCA1-201ENST00000309328 CHMP4AQ9BY43 222 aa23.27■■□□□ 1.32
SSSCA1-201ENST00000309328 LRRC4BQ9NT99 713 aa23.27■■□□□ 1.32
SSSCA1-201ENST00000309328 LAS1LQ9Y4W2 734 aaKnown RBP23.27■■□□□ 1.32
SSSCA1-201ENST00000309328 RREB1Q92766 1687 aa23.27■■□□□ 1.32
SSSCA1-201ENST00000309328 EIF4A1P60842 406 aaKnown RBP23.26■■□□□ 1.31
SSSCA1-201ENST00000309328 MYH16Q9H6N6 1097 aa23.26■■□□□ 1.31
SSSCA1-201ENST00000309328 SALL2Q9Y467 1007 aaPredicted RBP23.26■■□□□ 1.31
SSSCA1-201ENST00000309328 CICQ96RK0 1608 aaPredicted RBP23.26■■□□□ 1.31
SSSCA1-201ENST00000309328 UBR2Q8IWV8 1755 aa23.25■■□□□ 1.31
SSSCA1-201ENST00000309328 RC3H1Q5TC82 1133 aaKnown RBP23.25■■□□□ 1.31
SSSCA1-201ENST00000309328 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
SSSCA1-201ENST00000309328 SOS1Q07889 1333 aaPredicted RBP23.25■■□□□ 1.31
SSSCA1-201ENST00000309328 HOXB7P09629 217 aa23.24■■□□□ 1.31
SSSCA1-201ENST00000309328 HNRNPUQ00839 825 aaKnown RBP eCLIP23.24■■□□□ 1.31
SSSCA1-201ENST00000309328 GOLGA2Q08379 1002 aa23.24■■□□□ 1.31
SSSCA1-201ENST00000309328 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
SSSCA1-201ENST00000309328 STK32BQ9NY57 414 aa23.24■■□□□ 1.31
SSSCA1-201ENST00000309328 CNTNAP4Q9C0A0 1308 aa23.24■■□□□ 1.31
SSSCA1-201ENST00000309328 KCNQ3O43525 872 aa23.23■■□□□ 1.31
SSSCA1-201ENST00000309328 SLC4A9Q96Q91 983 aa23.23■■□□□ 1.31
SSSCA1-201ENST00000309328 KDM3BQ7LBC6 1761 aa23.22■■□□□ 1.31
SSSCA1-201ENST00000309328 E9PSI1 815 aa23.22■■□□□ 1.31
SSSCA1-201ENST00000309328 ITPK1Q13572 414 aa23.22■■□□□ 1.31
SSSCA1-201ENST00000309328 GIGYF1O75420 1035 aaPredicted RBP23.21■■□□□ 1.31
SSSCA1-201ENST00000309328 FLAD1Q8NFF5 587 aa23.21■■□□□ 1.31
SSSCA1-201ENST00000309328 AK7Q96M32 723 aa23.21■■□□□ 1.31
SSSCA1-201ENST00000309328 C5P01031 1676 aa23.21■■□□□ 1.31
SSSCA1-201ENST00000309328 SLC15A2Q16348 729 aa23.2■■□□□ 1.3
SSSCA1-201ENST00000309328 LINC00116Q8NCU8 138 aa23.2■■□□□ 1.3
SSSCA1-201ENST00000309328 NUP188Q5SRE5 1749 aa23.19■■□□□ 1.3
SSSCA1-201ENST00000309328 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
SSSCA1-201ENST00000309328 DNAJC10Q8IXB1 793 aa23.19■■□□□ 1.3
SSSCA1-201ENST00000309328 AKT1S1Q96B36 256 aa23.19■■□□□ 1.3
SSSCA1-201ENST00000309328 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
SSSCA1-201ENST00000309328 CYP19A1P11511 503 aaPredicted RBP23.18■■□□□ 1.3
SSSCA1-201ENST00000309328 ERBB4Q15303 1308 aa23.17■■□□□ 1.3
SSSCA1-201ENST00000309328 ADRA2BP18089 450 aa23.17■■□□□ 1.3
SSSCA1-201ENST00000309328 KCNQ4P56696 695 aa23.17■■□□□ 1.3
SSSCA1-201ENST00000309328 CCDC87Q9NVE4 849 aa23.17■■□□□ 1.3
SSSCA1-201ENST00000309328 TFCP2L1Q9NZI6 479 aa23.17■■□□□ 1.3
SSSCA1-201ENST00000309328 FANCIQ9NVI1 1328 aa23.16■■□□□ 1.3
SSSCA1-201ENST00000309328 SSFA2P28290 1259 aa23.16■■□□□ 1.3
SSSCA1-201ENST00000309328 CRKLP46109 303 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms