RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 FOXD4L4Q8WXT5 416 aaPredicted RBP25.61■■□□□ 1.69
RELA-201ENST00000308639 ERC2O15083 957 aa25.6■■□□□ 1.69
RELA-201ENST00000308639 SKOR2Q2VWA4 1001 aaPredicted RBP25.6■■□□□ 1.69
RELA-201ENST00000308639 PIK3C2AO00443 1686 aa25.6■■□□□ 1.69
RELA-201ENST00000308639 ERBB4Q15303 1308 aa25.59■■□□□ 1.69
RELA-201ENST00000308639 HOXC9P31274 260 aa25.59■■□□□ 1.69
RELA-201ENST00000308639 C14orf37Q86TY3 774 aa25.59■■□□□ 1.69
RELA-201ENST00000308639 GNAT3A8MTJ3 354 aa25.59■■□□□ 1.69
RELA-201ENST00000308639 NCLP19338 710 aaKnown RBP25.59■■□□□ 1.69
RELA-201ENST00000308639 RBM33Q96EV2 1170 aaKnown RBP25.59■■□□□ 1.69
RELA-201ENST00000308639 LRRFIP2Q9Y608 721 aaKnown RBP25.59■■□□□ 1.69
RELA-201ENST00000308639 DIP2AQ14689 1571 aa25.59■■□□□ 1.69
RELA-201ENST00000308639 REC8O95072 547 aa25.58■■□□□ 1.69
RELA-201ENST00000308639 NOL8Q76FK4 1167 aaKnown RBP25.58■■□□□ 1.69
RELA-201ENST00000308639 GOLGA6L22H0YM25 854 aa25.57■■□□□ 1.68
RELA-201ENST00000308639 ST18O60284 1047 aa25.57■■□□□ 1.68
RELA-201ENST00000308639 RILPL2Q969X0 211 aa25.57■■□□□ 1.68
RELA-201ENST00000308639 CYP2E1P05181 493 aaPredicted RBP25.56■■□□□ 1.68
RELA-201ENST00000308639 UNC5CLQ8IV45 518 aa25.56■■□□□ 1.68
RELA-201ENST00000308639 LRRCC1Q9C099 1032 aa25.56■■□□□ 1.68
RELA-201ENST00000308639 PHAXQ9H814 394 aaKnown RBP25.56■■□□□ 1.68
RELA-201ENST00000308639 PALD1Q9ULE6 856 aa25.56■■□□□ 1.68
RELA-201ENST00000308639 ZDHHC9Q9Y397 364 aa25.56■■□□□ 1.68
RELA-201ENST00000308639 CCDC30Q5VVM6 783 aa25.56■■□□□ 1.68
RELA-201ENST00000308639 OSBPL3Q9H4L5 887 aa25.56■■□□□ 1.68
RELA-201ENST00000308639 TRIM6-TRIM34B2RNG4 842 aa25.55■■□□□ 1.68
RELA-201ENST00000308639 PLEKHG5O94827 1062 aa25.55■■□□□ 1.68
RELA-201ENST00000308639 IL1RAPL2Q9NP60 686 aa25.55■■□□□ 1.68
RELA-201ENST00000308639 SALL3Q9BXA9 1300 aa25.55■■□□□ 1.68
RELA-201ENST00000308639 KCNA6P17658 529 aa25.55■■□□□ 1.68
RELA-201ENST00000308639 CLEC17AQ6ZS10 378 aa25.55■■□□□ 1.68
RELA-201ENST00000308639 ABTB2Q8N961 1025 aa25.55■■□□□ 1.68
RELA-201ENST00000308639 MX1P20591 662 aa25.54■■□□□ 1.68
RELA-201ENST00000308639 NEK4P51957 841 aa25.54■■□□□ 1.68
RELA-201ENST00000308639 KLHL40Q2TBA0 621 aa25.53■■□□□ 1.68
RELA-201ENST00000308639 CAVIN1Q6NZI2 390 aaKnown RBP25.53■■□□□ 1.68
RELA-201ENST00000308639 TBX22Q9Y458 520 aa25.53■■□□□ 1.68
RELA-201ENST00000308639 NUCB2P80303 420 aa25.53■■□□□ 1.68
RELA-201ENST00000308639 LMBRD1Q9NUN5 540 aa25.53■■□□□ 1.68
RELA-201ENST00000308639 ZBTB7CA1YPR0 619 aa25.52■■□□□ 1.68
RELA-201ENST00000308639 ATP8B2P98198 1209 aa25.52■■□□□ 1.68
RELA-201ENST00000308639 ESYT1Q9BSJ8 1104 aa25.52■■□□□ 1.68
RELA-201ENST00000308639 USP44Q9H0E7 712 aa25.52■■□□□ 1.68
RELA-201ENST00000308639 IL25Q9H293 177 aa25.52■■□□□ 1.68
RELA-201ENST00000308639 SETD1BQ9UPS6 1966 aaKnown RBP25.52■■□□□ 1.68
RELA-201ENST00000308639 MAP4K4O95819 1239 aaPredicted RBP25.51■■□□□ 1.67
RELA-201ENST00000308639 FAM208AQ9UK61 1670 aaKnown RBP25.51■■□□□ 1.67
RELA-201ENST00000308639 EIF2S2P20042 333 aaKnown RBP25.51■■□□□ 1.67
RELA-201ENST00000308639 ANO2Q9NQ90 1003 aa25.51■■□□□ 1.67
RELA-201ENST00000308639 PRPF40AO75400 957 aaKnown RBP25.5■■□□□ 1.67
RELA-201ENST00000308639 GNAI3P08754 354 aa25.5■■□□□ 1.67
RELA-201ENST00000308639 NUTM1Q86Y26 1132 aa25.5■■□□□ 1.67
RELA-201ENST00000308639 RBM27Q9P2N5 1060 aaKnown RBP25.5■■□□□ 1.67
RELA-201ENST00000308639 ISY1Q9ULR0 285 aaKnown RBP25.5■■□□□ 1.67
RELA-201ENST00000308639 NWD1Q149M9 1564 aa25.5■■□□□ 1.67
RELA-201ENST00000308639 PTMSP20962 102 aa25.5■■□□□ 1.67
RELA-201ENST00000308639 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
RELA-201ENST00000308639 MAP3K5Q99683 1374 aa25.5■■□□□ 1.67
RELA-201ENST00000308639 TAF7Q15545 349 aaPredicted RBP25.49■■□□□ 1.67
RELA-201ENST00000308639 HDGFL1Q5TGJ6 251 aa25.49■■□□□ 1.67
RELA-201ENST00000308639 IBTKQ9P2D0 1353 aaPredicted RBP25.49■■□□□ 1.67
RELA-201ENST00000308639 CHMLP26374 656 aa25.49■■□□□ 1.67
RELA-201ENST00000308639 CLCN1P35523 988 aa25.49■■□□□ 1.67
RELA-201ENST00000308639 TMX3Q96JJ7 454 aa25.49■■□□□ 1.67
RELA-201ENST00000308639 ANXA1P04083 346 aa25.48■■□□□ 1.67
RELA-201ENST00000308639 ESPNB1AK53 854 aa25.48■■□□□ 1.67
RELA-201ENST00000308639 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
RELA-201ENST00000308639 UPF3BQ9BZI7 483 aaKnown RBP25.47■■□□□ 1.67
RELA-201ENST00000308639 LRRC37A3O60309 1634 aa25.47■■□□□ 1.67
RELA-201ENST00000308639 NASPP49321 788 aaPredicted RBP25.47■■□□□ 1.67
RELA-201ENST00000308639 LGR6Q9HBX8 967 aa25.47■■□□□ 1.67
RELA-201ENST00000308639 UBTFL1P0CB47 393 aaPredicted RBP25.46■■□□□ 1.67
RELA-201ENST00000308639 GPT2Q8TD30 523 aa25.46■■□□□ 1.67
RELA-201ENST00000308639 TRIM44Q96DX7 344 aaPredicted RBP25.46■■□□□ 1.67
RELA-201ENST00000308639 NSFL1CQ9UNZ2 370 aaKnown RBP25.46■■□□□ 1.67
RELA-201ENST00000308639 KCNQ3O43525 872 aa25.46■■□□□ 1.67
RELA-201ENST00000308639 HTATSF1O43719 755 aaKnown RBP25.46■■□□□ 1.67
RELA-201ENST00000308639 MARF1Q9Y4F3 1742 aaKnown RBP25.45■■□□□ 1.67
RELA-201ENST00000308639 ZSCAN23Q3MJ62 389 aa25.45■■□□□ 1.67
RELA-201ENST00000308639 NAP1L5Q96NT1 182 aaPredicted RBP25.45■■□□□ 1.67
RELA-201ENST00000308639 CWC22Q9HCG8 908 aaKnown RBP25.45■■□□□ 1.67
RELA-201ENST00000308639 ARHGAP23Q9P227 1491 aa25.44■■□□□ 1.66
RELA-201ENST00000308639 FOXD4L6Q3SYB3 417 aaPredicted RBP25.44■■□□□ 1.66
RELA-201ENST00000308639 FOXD4L3Q6VB84 417 aaPredicted RBP25.44■■□□□ 1.66
RELA-201ENST00000308639 TUBGCP6Q96RT7 1819 aa25.44■■□□□ 1.66
RELA-201ENST00000308639 PPP1R42Q7Z4L9 355 aa25.43■■□□□ 1.66
RELA-201ENST00000308639 ZMYND15Q9H091 742 aa25.43■■□□□ 1.66
RELA-201ENST00000308639 SLIT1O75093 1534 aa25.43■■□□□ 1.66
RELA-201ENST00000308639 SURF6O75683 361 aaKnown RBP25.42■■□□□ 1.66
RELA-201ENST00000308639 NBPF7P0C2Y1 421 aaPredicted RBP25.42■■□□□ 1.66
RELA-201ENST00000308639 VSIG10Q8N0Z9 540 aa25.42■■□□□ 1.66
RELA-201ENST00000308639 NBPF6Q5VWK0 638 aa25.42■■□□□ 1.66
RELA-201ENST00000308639 NBPF4Q96M43 638 aa25.42■■□□□ 1.66
RELA-201ENST00000308639 THEMISQ8N1K5 641 aaPredicted RBP25.41■■□□□ 1.66
RELA-201ENST00000308639 CHPF2Q9P2E5 772 aa25.41■■□□□ 1.66
RELA-201ENST00000308639 LRRC59Q96AG4 307 aaKnown RBP25.4■■□□□ 1.66
RELA-201ENST00000308639 RBSNQ9H1K0 784 aa25.4■■□□□ 1.66
RELA-201ENST00000308639 STAP2Q9UGK3 403 aa25.4■■□□□ 1.66
RELA-201ENST00000308639 SOS1Q07889 1333 aaPredicted RBP25.39■■□□□ 1.66
RELA-201ENST00000308639 PRIM1P49642 420 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms