RNA–Protein interactions for RNA: ENST00000303230.5

HCN1-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN1, Length 9,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1-201ENST00000303230 CCDC158Q5M9N0 1113 aa19.67■□□□□ 0.74
HCN1-201ENST00000303230 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
HCN1-201ENST00000303230 ANKRD18BA2A2Z9 1011 aa19.66■□□□□ 0.74
HCN1-201ENST00000303230 SNW1Q13573 536 aaKnown RBP19.66■□□□□ 0.74
HCN1-201ENST00000303230 CFAP43Q8NDM7 1665 aa19.66■□□□□ 0.74
HCN1-201ENST00000303230 CCDC196A0A1B0GTZ2 297 aa19.66■□□□□ 0.74
HCN1-201ENST00000303230 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
HCN1-201ENST00000303230 GOLIM4O00461 696 aa19.66■□□□□ 0.74
HCN1-201ENST00000303230 PCF11O94913 1555 aaKnown RBP19.66■□□□□ 0.74
HCN1-201ENST00000303230 SKIDA1Q1XH10 827 aa19.66■□□□□ 0.74
HCN1-201ENST00000303230 CFTRP13569 1480 aa19.66■□□□□ 0.74
HCN1-201ENST00000303230 ANKRD62A6NC57 917 aa19.66■□□□□ 0.74
HCN1-201ENST00000303230 RBM25P49756 843 aaKnown RBP19.66■□□□□ 0.74
HCN1-201ENST00000303230 YEATS4O95619 227 aa19.65■□□□□ 0.74
HCN1-201ENST00000303230 ANKRD30BQ9BXX2 1392 aa19.65■□□□□ 0.74
HCN1-201ENST00000303230 MINK1Q8N4C8 1332 aaPredicted RBP19.65■□□□□ 0.74
HCN1-201ENST00000303230 RPAP2Q8IXW5 612 aaPredicted RBP19.65■□□□□ 0.74
HCN1-201ENST00000303230 CEBPZQ03701 1054 aaKnown RBP19.64■□□□□ 0.74
HCN1-201ENST00000303230 CEP135Q66GS9 1140 aa19.64■□□□□ 0.74
HCN1-201ENST00000303230 CEP63Q96MT8 703 aa19.64■□□□□ 0.74
HCN1-201ENST00000303230 FAM114A1Q8IWE2 563 aa19.64■□□□□ 0.73
HCN1-201ENST00000303230 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
HCN1-201ENST00000303230 CFAP57Q96MR6 1250 aa19.64■□□□□ 0.73
HCN1-201ENST00000303230 AQRO60306 1485 aaKnown RBP eCLIP19.64■□□□□ 0.73
HCN1-201ENST00000303230 CAMSAP2Q08AD1 1489 aa19.63■□□□□ 0.73
HCN1-201ENST00000303230 MTHFSP49914 203 aa19.63■□□□□ 0.73
HCN1-201ENST00000303230 KANK3Q6NY19 840 aa19.63■□□□□ 0.73
HCN1-201ENST00000303230 SMAP1Q8IYB5 467 aaPredicted RBP19.63■□□□□ 0.73
HCN1-201ENST00000303230 PTPRGP23470 1445 aa19.63■□□□□ 0.73
HCN1-201ENST00000303230 TNPO1Q92973 898 aaKnown RBP19.63■□□□□ 0.73
HCN1-201ENST00000303230 XPCQ01831 940 aaPredicted RBP19.62■□□□□ 0.73
HCN1-201ENST00000303230 TANGO6Q9C0B7 1094 aa19.62■□□□□ 0.73
HCN1-201ENST00000303230 KIF4BQ2VIQ3 1234 aa19.62■□□□□ 0.73
HCN1-201ENST00000303230 GTF2F1P35269 517 aaKnown RBP eCLIP19.62■□□□□ 0.73
HCN1-201ENST00000303230 TERF1P54274 439 aa19.62■□□□□ 0.73
HCN1-201ENST00000303230 RAD21O60216 631 aa19.62■□□□□ 0.73
HCN1-201ENST00000303230 ADCY5O95622 1261 aa19.61■□□□□ 0.73
HCN1-201ENST00000303230 TTC14Q96N46 770 aa19.61■□□□□ 0.73
HCN1-201ENST00000303230 BCL11BQ9C0K0 894 aaPredicted RBP19.61■□□□□ 0.73
HCN1-201ENST00000303230 IFI16Q16666 785 aaKnown RBP19.61■□□□□ 0.73
HCN1-201ENST00000303230 LMAN1P49257 510 aa19.61■□□□□ 0.73
HCN1-201ENST00000303230 BMP2KLQ5H9B9 411 aa19.61■□□□□ 0.73
HCN1-201ENST00000303230 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
HCN1-201ENST00000303230 PIP4K2BP78356 416 aa19.6■□□□□ 0.73
HCN1-201ENST00000303230 NSD2O96028 1365 aa19.6■□□□□ 0.73
HCN1-201ENST00000303230 RAB34Q9BZG1 259 aa19.6■□□□□ 0.73
HCN1-201ENST00000303230 CTAGE1Q96RT6 745 aa19.6■□□□□ 0.73
HCN1-201ENST00000303230 TSG101Q99816 390 aa19.6■□□□□ 0.73
HCN1-201ENST00000303230 JAKMIP1Q96N16 626 aaKnown RBP19.59■□□□□ 0.73
HCN1-201ENST00000303230 RNF187Q5TA31 235 aaPredicted RBP19.59■□□□□ 0.73
HCN1-201ENST00000303230 SSR1P43307 286 aaKnown RBP19.59■□□□□ 0.73
HCN1-201ENST00000303230 ZNF287Q9HBT7 754 aa19.59■□□□□ 0.73
HCN1-201ENST00000303230 OPA1O60313 960 aa19.59■□□□□ 0.73
HCN1-201ENST00000303230 MSL1Q68DK7 614 aa19.59■□□□□ 0.73
HCN1-201ENST00000303230 PLVAPQ9BX97 442 aa19.59■□□□□ 0.73
HCN1-201ENST00000303230 PRDM10Q9NQV6 1147 aa19.59■□□□□ 0.73
HCN1-201ENST00000303230 HOOK3Q86VS8 718 aa19.59■□□□□ 0.73
HCN1-201ENST00000303230 TTC39AQ5SRH9 613 aa19.58■□□□□ 0.73
HCN1-201ENST00000303230 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.58■□□□□ 0.73
HCN1-201ENST00000303230 LIMCH1Q9UPQ0 1083 aa19.58■□□□□ 0.73
HCN1-201ENST00000303230 NUP88Q99567 741 aaPredicted RBP19.58■□□□□ 0.73
HCN1-201ENST00000303230 GLRX3O76003 335 aaKnown RBP19.58■□□□□ 0.73
HCN1-201ENST00000303230 GPATCH11Q8N954 259 aa19.58■□□□□ 0.73
HCN1-201ENST00000303230 SREK1Q8WXA9 508 aaKnown RBP19.58■□□□□ 0.73
HCN1-201ENST00000303230 RAPGEF4Q8WZA2 1011 aa19.58■□□□□ 0.73
HCN1-201ENST00000303230 SETSIPP0DME0 302 aa19.58■□□□□ 0.73
HCN1-201ENST00000303230 ZHX1Q9UKY1 873 aaPredicted RBP19.58■□□□□ 0.72
HCN1-201ENST00000303230 UBAC1Q9BSL1 405 aa19.58■□□□□ 0.72
HCN1-201ENST00000303230 CPSF2Q9P2I0 782 aaKnown RBP19.57■□□□□ 0.72
HCN1-201ENST00000303230 HSF2BPO75031 334 aa19.57■□□□□ 0.72
HCN1-201ENST00000303230 WDR66Q8TBY9 1149 aa19.57■□□□□ 0.72
HCN1-201ENST00000303230 CDCA7LQ96GN5 454 aa19.57■□□□□ 0.72
HCN1-201ENST00000303230 URI1O94763 535 aaPredicted RBP19.57■□□□□ 0.72
HCN1-201ENST00000303230 CTCFLQ8NI51 663 aaPredicted RBP19.57■□□□□ 0.72
HCN1-201ENST00000303230 TTC31Q49AM3 519 aaPredicted RBP19.57■□□□□ 0.72
HCN1-201ENST00000303230 LRSAM1Q6UWE0 723 aa19.57■□□□□ 0.72
HCN1-201ENST00000303230 TBC1D32Q96NH3 1257 aa19.56■□□□□ 0.72
HCN1-201ENST00000303230 MX1P20591 662 aa19.56■□□□□ 0.72
HCN1-201ENST00000303230 NCOA1Q15788 1441 aa19.56■□□□□ 0.72
HCN1-201ENST00000303230 SETD1BQ9UPS6 1966 aaKnown RBP19.56■□□□□ 0.72
HCN1-201ENST00000303230 IQGAP2Q13576 1575 aa19.56■□□□□ 0.72
HCN1-201ENST00000303230 ZSCAN16Q9H4T2 348 aaPredicted RBP19.56■□□□□ 0.72
HCN1-201ENST00000303230 CCDC50Q8IVM0 306 aa19.56■□□□□ 0.72
HCN1-201ENST00000303230 RSRC1Q96IZ7 334 aaKnown RBP19.56■□□□□ 0.72
HCN1-201ENST00000303230 HMG20BQ9P0W2 317 aa19.56■□□□□ 0.72
HCN1-201ENST00000303230 SH3BGRP55822 239 aaPredicted RBP19.55■□□□□ 0.72
HCN1-201ENST00000303230 SEPT6Q14141 434 aa19.55■□□□□ 0.72
HCN1-201ENST00000303230 ADGBQ8N7X0 1667 aa19.55■□□□□ 0.72
HCN1-201ENST00000303230 RPGRIP1LQ68CZ1 1315 aa19.55■□□□□ 0.72
HCN1-201ENST00000303230 HMOX1P09601 288 aa19.55■□□□□ 0.72
HCN1-201ENST00000303230 TBC1D2Q9BYX2 928 aa19.55■□□□□ 0.72
HCN1-201ENST00000303230 PRKAR2BP31323 418 aa19.55■□□□□ 0.72
HCN1-201ENST00000303230 EXOSC9Q06265 439 aaKnown RBP19.55■□□□□ 0.72
HCN1-201ENST00000303230 SOGA3Q5TF21 947 aa19.55■□□□□ 0.72
HCN1-201ENST00000303230 EBAG9O00559 213 aa19.55■□□□□ 0.72
HCN1-201ENST00000303230 FCHSD2O94868 740 aa19.54■□□□□ 0.72
HCN1-201ENST00000303230 CTAGE9A4FU28 777 aa19.54■□□□□ 0.72
HCN1-201ENST00000303230 TICAM2Q86XR7 235 aa19.54■□□□□ 0.72
HCN1-201ENST00000303230 GSTTP1A0A1W2PQM5 241 aa19.54■□□□□ 0.72
HCN1-201ENST00000303230 SLFN5Q08AF3 891 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms