RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 CHPF2Q9P2E5 772 aa13.83□□□□□ -0.2
IDH3A-201ENST00000299518 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
IDH3A-201ENST00000299518 CHMP4BQ9H444 224 aaKnown RBP13.82□□□□□ -0.2
IDH3A-201ENST00000299518 MAP3K5Q99683 1374 aa13.82□□□□□ -0.2
IDH3A-201ENST00000299518 UNC5CLQ8IV45 518 aa13.82□□□□□ -0.2
IDH3A-201ENST00000299518 CABLES1Q8TDN4 633 aa13.82□□□□□ -0.2
IDH3A-201ENST00000299518 NOL8Q76FK4 1167 aaKnown RBP13.82□□□□□ -0.2
IDH3A-201ENST00000299518 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
IDH3A-201ENST00000299518 PKP1Q13835 747 aa13.81□□□□□ -0.2
IDH3A-201ENST00000299518 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
IDH3A-201ENST00000299518 PROSER3Q2NL68 480 aa13.81□□□□□ -0.2
IDH3A-201ENST00000299518 CCDC30Q5VVM6 783 aa13.81□□□□□ -0.2
IDH3A-201ENST00000299518 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
IDH3A-201ENST00000299518 NUTM1Q86Y26 1132 aa13.81□□□□□ -0.2
IDH3A-201ENST00000299518 CHMP5Q9NZZ3 219 aa13.81□□□□□ -0.2
IDH3A-201ENST00000299518 GCP02774 474 aa13.8□□□□□ -0.2
IDH3A-201ENST00000299518 GNAI2P04899 355 aa13.8□□□□□ -0.2
IDH3A-201ENST00000299518 ZNF530Q6P9A1 599 aaPredicted RBP13.8□□□□□ -0.2
IDH3A-201ENST00000299518 IP6K1Q92551 441 aa13.8□□□□□ -0.2
IDH3A-201ENST00000299518 TNPO1Q92973 898 aaKnown RBP13.8□□□□□ -0.2
IDH3A-201ENST00000299518 IL25Q9H293 177 aa13.8□□□□□ -0.2
IDH3A-201ENST00000299518 LTN1O94822 1766 aa13.8□□□□□ -0.2
IDH3A-201ENST00000299518 RILPL2Q969X0 211 aa13.8□□□□□ -0.2
IDH3A-201ENST00000299518 PDE1AP54750 535 aa13.79□□□□□ -0.2
IDH3A-201ENST00000299518 PI4KAP2A4QPH2 592 aa13.79□□□□□ -0.2
IDH3A-201ENST00000299518 SSFA2P28290 1259 aa13.79□□□□□ -0.2
IDH3A-201ENST00000299518 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
IDH3A-201ENST00000299518 PI4KAP1Q8N8J0 262 aa13.79□□□□□ -0.2
IDH3A-201ENST00000299518 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
IDH3A-201ENST00000299518 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
IDH3A-201ENST00000299518 PANK2Q9BZ23 570 aa13.79□□□□□ -0.2
IDH3A-201ENST00000299518 CCT4P50991 539 aaKnown RBP13.79□□□□□ -0.2
IDH3A-201ENST00000299518 SLC39A6Q13433 755 aa13.78□□□□□ -0.2
IDH3A-201ENST00000299518 TRIM6-TRIM34B2RNG4 842 aa13.78□□□□□ -0.2
IDH3A-201ENST00000299518 ZGPATQ8N5A5 531 aaKnown RBP13.77□□□□□ -0.2
IDH3A-201ENST00000299518 PXDNQ92626 1479 aa13.77□□□□□ -0.21
IDH3A-201ENST00000299518 BTBD11A6QL63 1104 aa13.77□□□□□ -0.21
IDH3A-201ENST00000299518 TRAK2O60296 914 aa13.77□□□□□ -0.21
IDH3A-201ENST00000299518 DDIT3P35638 169 aa13.77□□□□□ -0.21
IDH3A-201ENST00000299518 EIF4A1P60842 406 aaKnown RBP13.77□□□□□ -0.21
IDH3A-201ENST00000299518 K7ELQ4 463 aaPredicted RBP13.77□□□□□ -0.21
IDH3A-201ENST00000299518 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.21
IDH3A-201ENST00000299518 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
IDH3A-201ENST00000299518 TEFQ10587 303 aa13.76□□□□□ -0.21
IDH3A-201ENST00000299518 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
IDH3A-201ENST00000299518 ANKRD24Q8TF21 1146 aa13.76□□□□□ -0.21
IDH3A-201ENST00000299518 JARID2Q92833 1246 aaPredicted RBP13.76□□□□□ -0.21
IDH3A-201ENST00000299518 CHRNA2Q15822 529 aa13.76□□□□□ -0.21
IDH3A-201ENST00000299518 PPP1R42Q7Z4L9 355 aa13.76□□□□□ -0.21
IDH3A-201ENST00000299518 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
IDH3A-201ENST00000299518 PALD1Q9ULE6 856 aa13.76□□□□□ -0.21
IDH3A-201ENST00000299518 UBTFL1P0CB47 393 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-201ENST00000299518 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
IDH3A-201ENST00000299518 SNX21Q969T3 373 aa13.75□□□□□ -0.21
IDH3A-201ENST00000299518 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
IDH3A-201ENST00000299518 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
IDH3A-201ENST00000299518 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
IDH3A-201ENST00000299518 CHD2O14647 1828 aaKnown RBP13.75□□□□□ -0.21
IDH3A-201ENST00000299518 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
IDH3A-201ENST00000299518 HMMRO75330 724 aa13.75□□□□□ -0.21
IDH3A-201ENST00000299518 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
IDH3A-201ENST00000299518 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
IDH3A-201ENST00000299518 ATP8B2P98198 1209 aa13.74□□□□□ -0.21
IDH3A-201ENST00000299518 KRT28Q7Z3Y7 464 aa13.74□□□□□ -0.21
IDH3A-201ENST00000299518 PA2G4Q9UQ80 394 aaKnown RBP13.74□□□□□ -0.21
IDH3A-201ENST00000299518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.74□□□□□ -0.21
IDH3A-201ENST00000299518 MX1P20591 662 aa13.73□□□□□ -0.21
IDH3A-201ENST00000299518 ARHGEF25Q86VW2 580 aa13.73□□□□□ -0.21
IDH3A-201ENST00000299518 FOXD4L6Q3SYB3 417 aaPredicted RBP13.73□□□□□ -0.21
IDH3A-201ENST00000299518 FOXD4L3Q6VB84 417 aaPredicted RBP13.73□□□□□ -0.21
IDH3A-201ENST00000299518 HSPA2P54652 639 aa13.72□□□□□ -0.21
IDH3A-201ENST00000299518 NFAT5O94916 1531 aa13.72□□□□□ -0.21
IDH3A-201ENST00000299518 UPF3BQ9BZI7 483 aaKnown RBP13.72□□□□□ -0.21
IDH3A-201ENST00000299518 NCOA3Q9Y6Q9 1424 aa13.72□□□□□ -0.21
IDH3A-201ENST00000299518 FAM208AQ9UK61 1670 aaKnown RBP13.72□□□□□ -0.21
IDH3A-201ENST00000299518 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
IDH3A-201ENST00000299518 SRCIN1Q9C0H9 1055 aa13.72□□□□□ -0.21
IDH3A-201ENST00000299518 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
IDH3A-201ENST00000299518 NLRP2Q9NX02 1062 aa13.72□□□□□ -0.21
IDH3A-201ENST00000299518 GNAI3P08754 354 aa13.71□□□□□ -0.21
IDH3A-201ENST00000299518 MYL6BP14649 208 aa13.71□□□□□ -0.21
IDH3A-201ENST00000299518 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.21
IDH3A-201ENST00000299518 XRCC6P12956 609 aaKnown RBP eCLIP13.71□□□□□ -0.21
IDH3A-201ENST00000299518 RNMTO43148 476 aaKnown RBP13.71□□□□□ -0.21
IDH3A-201ENST00000299518 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.21
IDH3A-201ENST00000299518 KLHDC4Q8TBB5 520 aa13.71□□□□□ -0.21
IDH3A-201ENST00000299518 ADGRL3Q9HAR2 1447 aa13.71□□□□□ -0.22
IDH3A-201ENST00000299518 SALL3Q9BXA9 1300 aa13.71□□□□□ -0.22
IDH3A-201ENST00000299518 MAP3K2Q9Y2U5 619 aa13.71□□□□□ -0.22
IDH3A-201ENST00000299518 RGPD5Q99666 1765 aa13.7□□□□□ -0.22
IDH3A-201ENST00000299518 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
IDH3A-201ENST00000299518 C1orf141Q5JVX7 400 aa13.7□□□□□ -0.22
IDH3A-201ENST00000299518 BEND3Q5T5X7 828 aa13.7□□□□□ -0.22
IDH3A-201ENST00000299518 DDX54Q8TDD1 881 aaKnown RBP13.7□□□□□ -0.22
IDH3A-201ENST00000299518 DNAAF4Q8WXU2 420 aa13.7□□□□□ -0.22
IDH3A-201ENST00000299518 NEK4P51957 841 aa13.7□□□□□ -0.22
IDH3A-201ENST00000299518 GAS2L3Q86XJ1 694 aa13.7□□□□□ -0.22
IDH3A-201ENST00000299518 IBTKQ9P2D0 1353 aaPredicted RBP13.7□□□□□ -0.22
IDH3A-201ENST00000299518 ERC2O15083 957 aa13.7□□□□□ -0.22
IDH3A-201ENST00000299518 ADCY9O60503 1353 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms