RNA–Protein interactions for RNA: ENST00000299299.3

PCBD1-201, Transcript of pterin-4 alpha-carbinolamine dehydratase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBD1, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD1-201ENST00000299299 CFAP53Q96M91 514 aa18.06■□□□□ 0.48
PCBD1-201ENST00000299299 TUBGCP6Q96RT7 1819 aa18.05■□□□□ 0.48
PCBD1-201ENST00000299299 PNPLA7Q6ZV29 1317 aa18.05■□□□□ 0.48
PCBD1-201ENST00000299299 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
PCBD1-201ENST00000299299 SMARCC1Q92922 1105 aaPredicted RBP18.05■□□□□ 0.48
PCBD1-201ENST00000299299 C5P01031 1676 aa18.05■□□□□ 0.48
PCBD1-201ENST00000299299 C1orf141Q5JVX7 400 aa18.04■□□□□ 0.48
PCBD1-201ENST00000299299 DCAF5Q96JK2 942 aa18.04■□□□□ 0.48
PCBD1-201ENST00000299299 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
PCBD1-201ENST00000299299 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
PCBD1-201ENST00000299299 ITGB4P16144 1822 aa18.04■□□□□ 0.48
PCBD1-201ENST00000299299 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
PCBD1-201ENST00000299299 GIGYF1O75420 1035 aaPredicted RBP18.03■□□□□ 0.48
PCBD1-201ENST00000299299 ASAP1Q9ULH1 1129 aa18.03■□□□□ 0.48
PCBD1-201ENST00000299299 LOC102724428A0A0B4J2F2 783 aa18.01■□□□□ 0.47
PCBD1-201ENST00000299299 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
PCBD1-201ENST00000299299 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
PCBD1-201ENST00000299299 SIK1P57059 783 aa18.01■□□□□ 0.47
PCBD1-201ENST00000299299 UTRNP46939 3433 aa18■□□□□ 0.47
PCBD1-201ENST00000299299 ATG3Q9NT62 314 aa18■□□□□ 0.47
PCBD1-201ENST00000299299 C4BP0C0L5 1744 aa18■□□□□ 0.47
PCBD1-201ENST00000299299 MRC1P22897 1456 aa17.99■□□□□ 0.47
PCBD1-201ENST00000299299 CABP4P57796 275 aa17.98■□□□□ 0.47
PCBD1-201ENST00000299299 AKAP4Q5JQC9 854 aa17.98■□□□□ 0.47
PCBD1-201ENST00000299299 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
PCBD1-201ENST00000299299 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
PCBD1-201ENST00000299299 ITPK1Q13572 414 aa17.97■□□□□ 0.47
PCBD1-201ENST00000299299 AK7Q96M32 723 aa17.97■□□□□ 0.47
PCBD1-201ENST00000299299 NUDCQ9Y266 331 aa17.97■□□□□ 0.47
PCBD1-201ENST00000299299 MSH5O43196 834 aa17.96■□□□□ 0.47
PCBD1-201ENST00000299299 MTHFSDQ2M296 383 aaKnown RBP17.96■□□□□ 0.47
PCBD1-201ENST00000299299 AMIGO3Q86WK7 504 aa17.96■□□□□ 0.47
PCBD1-201ENST00000299299 NLGN2Q8NFZ4 835 aa17.96■□□□□ 0.47
PCBD1-201ENST00000299299 ATP6V1AP38606 617 aa17.95■□□□□ 0.46
PCBD1-201ENST00000299299 COL23A1Q86Y22 540 aaPredicted RBP17.95■□□□□ 0.46
PCBD1-201ENST00000299299 DLG5Q8TDM6 1919 aa17.95■□□□□ 0.46
PCBD1-201ENST00000299299 VIRMAQ69YN4 1812 aaKnown RBP17.95■□□□□ 0.46
PCBD1-201ENST00000299299 TAF1LQ8IZX4 1826 aa17.95■□□□□ 0.46
PCBD1-201ENST00000299299 GRIN3BO60391 1043 aa17.94■□□□□ 0.46
PCBD1-201ENST00000299299 PHF14O94880 888 aa17.94■□□□□ 0.46
PCBD1-201ENST00000299299 HMGB2P26583 209 aaKnown RBP17.94■□□□□ 0.46
PCBD1-201ENST00000299299 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
PCBD1-201ENST00000299299 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
PCBD1-201ENST00000299299 WDR43Q15061 677 aaKnown RBP eCLIP17.93■□□□□ 0.46
PCBD1-201ENST00000299299 NFATC2IPQ8NCF5 419 aa17.93■□□□□ 0.46
PCBD1-201ENST00000299299 SLC4A9Q96Q91 983 aa17.93■□□□□ 0.46
PCBD1-201ENST00000299299 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
PCBD1-201ENST00000299299 RSPH6AQ9H0K4 717 aa17.93■□□□□ 0.46
PCBD1-201ENST00000299299 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
PCBD1-201ENST00000299299 GNPATO15228 680 aa17.92■□□□□ 0.46
PCBD1-201ENST00000299299 RNMTO43148 476 aaKnown RBP17.92■□□□□ 0.46
PCBD1-201ENST00000299299 PRKAR2BP31323 418 aa17.92■□□□□ 0.46
PCBD1-201ENST00000299299 MSL1Q68DK7 614 aa17.92■□□□□ 0.46
PCBD1-201ENST00000299299 SMIM5Q71RC9 77 aa17.92■□□□□ 0.46
PCBD1-201ENST00000299299 SLC52A2Q9HAB3 445 aa17.92■□□□□ 0.46
PCBD1-201ENST00000299299 LGR6Q9HBX8 967 aa17.92■□□□□ 0.46
PCBD1-201ENST00000299299 ADAMTS8Q9UP79 889 aa17.92■□□□□ 0.46
PCBD1-201ENST00000299299 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
PCBD1-201ENST00000299299 GAS2L2Q8NHY3 880 aa17.91■□□□□ 0.46
PCBD1-201ENST00000299299 ZNF831Q5JPB2 1677 aa17.9■□□□□ 0.46
PCBD1-201ENST00000299299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.9■□□□□ 0.46
PCBD1-201ENST00000299299 PTCD1O75127 700 aaKnown RBP17.9■□□□□ 0.46
PCBD1-201ENST00000299299 YBX3P16989 372 aaKnown RBP eCLIP17.9■□□□□ 0.469e-7■■□□□ 14.3
PCBD1-201ENST00000299299 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
PCBD1-201ENST00000299299 FCHSD2O94868 740 aa17.89■□□□□ 0.45
PCBD1-201ENST00000299299 SSFA2P28290 1259 aa17.89■□□□□ 0.45
PCBD1-201ENST00000299299 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
PCBD1-201ENST00000299299 UBR3Q6ZT12 1888 aa17.88■□□□□ 0.45
PCBD1-201ENST00000299299 KCPQ6ZWJ8 1503 aa17.88■□□□□ 0.45
PCBD1-201ENST00000299299 COL5A3P25940 1745 aaPredicted RBP17.88■□□□□ 0.45
PCBD1-201ENST00000299299 CNTNAP4Q9C0A0 1308 aa17.88■□□□□ 0.45
PCBD1-201ENST00000299299 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
PCBD1-201ENST00000299299 PHACTR3Q96KR7 559 aa17.87■□□□□ 0.45
PCBD1-201ENST00000299299 ATP10DQ9P241 1426 aa17.87■□□□□ 0.45
PCBD1-201ENST00000299299 TJP1Q07157 1748 aa17.86■□□□□ 0.45
PCBD1-201ENST00000299299 GNAT3A8MTJ3 354 aa17.86■□□□□ 0.45
PCBD1-201ENST00000299299 SLC39A6Q13433 755 aa17.86■□□□□ 0.45
PCBD1-201ENST00000299299 IFFO2Q5TF58 517 aa17.86■□□□□ 0.45
PCBD1-201ENST00000299299 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
PCBD1-201ENST00000299299 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
PCBD1-201ENST00000299299 RTCBQ9Y3I0 505 aaKnown RBP17.84■□□□□ 0.45
PCBD1-201ENST00000299299 CD2APQ9Y5K6 639 aa17.84■□□□□ 0.45
PCBD1-201ENST00000299299 CEMIPQ8WUJ3 1361 aa17.83■□□□□ 0.45
PCBD1-201ENST00000299299 IL17REQ8NFR9 667 aa17.83■□□□□ 0.44
PCBD1-201ENST00000299299 PNNQ9H307 717 aaKnown RBP17.83■□□□□ 0.44
PCBD1-201ENST00000299299 GPBP1L1Q9HC44 474 aaPredicted RBP17.83■□□□□ 0.44
PCBD1-201ENST00000299299 CRKLP46109 303 aaKnown RBP17.82■□□□□ 0.44
PCBD1-201ENST00000299299 TEFQ10587 303 aa17.82■□□□□ 0.44
PCBD1-201ENST00000299299 RC3H1Q5TC82 1133 aaKnown RBP17.82■□□□□ 0.44
PCBD1-201ENST00000299299 RUNDC1Q96C34 613 aa17.82■□□□□ 0.44
PCBD1-201ENST00000299299 ADRA2BP18089 450 aa17.81■□□□□ 0.44
PCBD1-201ENST00000299299 DNAJC10Q8IXB1 793 aa17.81■□□□□ 0.44
PCBD1-201ENST00000299299 GOLGB1Q14789 3259 aaKnown RBP17.8■□□□□ 0.44
PCBD1-201ENST00000299299 TTC5Q8N0Z6 440 aa17.8■□□□□ 0.44
PCBD1-201ENST00000299299 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
PCBD1-201ENST00000299299 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
PCBD1-201ENST00000299299 RPS6KA4O75676 772 aa17.79■□□□□ 0.44
PCBD1-201ENST00000299299 TRAPPC3LQ5T215 181 aa17.79■□□□□ 0.44
PCBD1-201ENST00000299299 C4AP0C0L4 1744 aa17.78■□□□□ 0.44
PCBD1-201ENST00000299299 MCM10Q7L590 875 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms