RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 SLIT2O94813 1529 aa8.43□□□□□ -1.06
TMC1-201ENST00000297784 FRAT2O75474 233 aaPredicted RBP8.43□□□□□ -1.06
TMC1-201ENST00000297784 HSPA1LP34931 641 aa8.43□□□□□ -1.06
TMC1-201ENST00000297784 CALD1Q05682 793 aaKnown RBP8.43□□□□□ -1.06
TMC1-201ENST00000297784 FAM161AQ3B820 660 aa8.43□□□□□ -1.06
TMC1-201ENST00000297784 ZNF530Q6P9A1 599 aaPredicted RBP8.43□□□□□ -1.06
TMC1-201ENST00000297784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.06
TMC1-201ENST00000297784 PLEKHG2Q9H7P9 1386 aa8.43□□□□□ -1.06
TMC1-201ENST00000297784 NUTM2BA6NNL0 878 aaPredicted RBP8.42□□□□□ -1.06
TMC1-201ENST00000297784 NUTM2EB1AL46 878 aaPredicted RBP8.42□□□□□ -1.06
TMC1-201ENST00000297784 ELL2O00472 640 aaPredicted RBP8.42□□□□□ -1.06
TMC1-201ENST00000297784 PHKG2P15735 406 aa8.42□□□□□ -1.06
TMC1-201ENST00000297784 NUTM2AQ8IVF1 878 aaPredicted RBP8.42□□□□□ -1.06
TMC1-201ENST00000297784 SSH1Q8WYL5 1049 aa8.42□□□□□ -1.06
TMC1-201ENST00000297784 RAPGEF4Q8WZA2 1011 aa8.42□□□□□ -1.06
TMC1-201ENST00000297784 RRP9O43818 475 aaKnown RBP8.42□□□□□ -1.06
TMC1-201ENST00000297784 EVA1CP58658 441 aa8.42□□□□□ -1.06
TMC1-201ENST00000297784 RRAGDQ9NQL2 400 aaPredicted RBP8.42□□□□□ -1.06
TMC1-201ENST00000297784 TNNQ9UQP3 1299 aa8.42□□□□□ -1.06
TMC1-201ENST00000297784 DISP2A7MBM2 1401 aa8.42□□□□□ -1.06
TMC1-201ENST00000297784 JCADQ9P266 1359 aa8.42□□□□□ -1.06
TMC1-201ENST00000297784 RNMTO43148 476 aaKnown RBP8.42□□□□□ -1.06
TMC1-201ENST00000297784 CT47B1P0C2W7 299 aaPredicted RBP8.42□□□□□ -1.06
TMC1-201ENST00000297784 C8orf34Q49A92 452 aa8.42□□□□□ -1.06
TMC1-201ENST00000297784 BCL9LQ86UU0 1499 aa8.41□□□□□ -1.06
TMC1-201ENST00000297784 TATP17735 454 aaPredicted RBP8.41□□□□□ -1.06
TMC1-201ENST00000297784 CENPQQ7L2Z9 268 aaPredicted RBP8.41□□□□□ -1.06
TMC1-201ENST00000297784 TOGARAM1Q9Y4F4 1720 aa8.41□□□□□ -1.06
TMC1-201ENST00000297784 KCNQ3O43525 872 aa8.41□□□□□ -1.06
TMC1-201ENST00000297784 TAF7Q15545 349 aaPredicted RBP8.41□□□□□ -1.06
TMC1-201ENST00000297784 TWISTNBQ3B726 338 aaPredicted RBP8.41□□□□□ -1.06
TMC1-201ENST00000297784 RLBP1P12271 317 aa8.4□□□□□ -1.06
TMC1-201ENST00000297784 IL2RBP14784 551 aa8.4□□□□□ -1.06
TMC1-201ENST00000297784 ZMYND15Q9H091 742 aa8.4□□□□□ -1.06
TMC1-201ENST00000297784 TSPYL4Q9UJ04 414 aa8.4□□□□□ -1.06
TMC1-201ENST00000297784 MRC1P22897 1456 aa8.4□□□□□ -1.06
TMC1-201ENST00000297784 SLC4A3P48751 1232 aa8.4□□□□□ -1.07
TMC1-201ENST00000297784 BRPF1P55201 1214 aaPredicted RBP8.4□□□□□ -1.07
TMC1-201ENST00000297784 C1orf141Q5JVX7 400 aa8.4□□□□□ -1.07
TMC1-201ENST00000297784 CRBNQ96SW2 442 aa8.4□□□□□ -1.07
TMC1-201ENST00000297784 SPG7Q9UQ90 795 aa8.4□□□□□ -1.07
TMC1-201ENST00000297784 IFNL2Q8IZJ0 200 aa8.39□□□□□ -1.07
TMC1-201ENST00000297784 SPATA31A1Q5TZJ5 1347 aa8.39□□□□□ -1.07
TMC1-201ENST00000297784 CLCN1P35523 988 aa8.39□□□□□ -1.07
TMC1-201ENST00000297784 ALDH1L2Q3SY69 923 aa8.39□□□□□ -1.07
TMC1-201ENST00000297784 ZCRB1Q8TBF4 217 aaKnown RBP8.39□□□□□ -1.07
TMC1-201ENST00000297784 BABAM1Q9NWV8 329 aa8.39□□□□□ -1.07
TMC1-201ENST00000297784 HEG1Q9ULI3 1381 aa8.39□□□□□ -1.07
TMC1-201ENST00000297784 ITGB4P16144 1822 aa8.39□□□□□ -1.07
TMC1-201ENST00000297784 NKX1-1Q15270 411 aaPredicted RBP8.39□□□□□ -1.07
TMC1-201ENST00000297784 MRPL50Q8N5N7 158 aaKnown RBP8.39□□□□□ -1.07
TMC1-201ENST00000297784 NFATC2IPQ8NCF5 419 aa8.39□□□□□ -1.07
TMC1-201ENST00000297784 NOB1Q9ULX3 412 aaKnown RBP8.39□□□□□ -1.07
TMC1-201ENST00000297784 GLI3P10071 1580 aa8.38□□□□□ -1.07
TMC1-201ENST00000297784 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
TMC1-201ENST00000297784 SLC52A2Q9HAB3 445 aa8.38□□□□□ -1.07
TMC1-201ENST00000297784 C5P01031 1676 aa8.38□□□□□ -1.07
TMC1-201ENST00000297784 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.38□□□□□ -1.07
TMC1-201ENST00000297784 EIF4A1P60842 406 aaKnown RBP8.38□□□□□ -1.07
TMC1-201ENST00000297784 PANK1Q8TE04 598 aa8.38□□□□□ -1.07
TMC1-201ENST00000297784 SMC4Q9NTJ3 1288 aa8.38□□□□□ -1.07
TMC1-201ENST00000297784 SPATA31A5Q5VU36 1347 aa8.38□□□□□ -1.07
TMC1-201ENST00000297784 SPATA31A6Q5VVP1 1343 aa8.38□□□□□ -1.07
TMC1-201ENST00000297784 SPATA31A7Q8IWB4 1347 aa8.38□□□□□ -1.07
TMC1-201ENST00000297784 UBR2Q8IWV8 1755 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 BTBD11A6QL63 1104 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 TRIM27P14373 513 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 PCDH11XQ9BZA7 1347 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 PCDH11YQ9BZA8 1340 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 PAPPAQ13219 1627 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 CACNA1FO60840 1977 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 PRAMEF22A3QJZ6 481 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 PDE3AQ14432 1141 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
TMC1-201ENST00000297784 UNC5CLQ8IV45 518 aa8.37□□□□□ -1.07
TMC1-201ENST00000297784 RGS12O14924 1447 aa8.36□□□□□ -1.07
TMC1-201ENST00000297784 DDX54Q8TDD1 881 aaKnown RBP8.36□□□□□ -1.07
TMC1-201ENST00000297784 HSP90AA1P07900 732 aaKnown RBP8.36□□□□□ -1.07
TMC1-201ENST00000297784 TEFQ10587 303 aa8.36□□□□□ -1.07
TMC1-201ENST00000297784 SLC39A6Q13433 755 aa8.36□□□□□ -1.07
TMC1-201ENST00000297784 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
TMC1-201ENST00000297784 ATF7IPQ6VMQ6 1270 aa8.35□□□□□ -1.07
TMC1-201ENST00000297784 NGLY1Q96IV0 654 aa8.35□□□□□ -1.07
TMC1-201ENST00000297784 FSD2A1L4K1 749 aa8.35□□□□□ -1.07
TMC1-201ENST00000297784 ZNF790Q6PG37 636 aa8.35□□□□□ -1.07
TMC1-201ENST00000297784 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.35□□□□□ -1.07
TMC1-201ENST00000297784 COG6Q9Y2V7 657 aa8.35□□□□□ -1.07
TMC1-201ENST00000297784 THRAP3Q9Y2W1 955 aaKnown RBP8.35□□□□□ -1.07
TMC1-201ENST00000297784 GIGYF1O75420 1035 aaPredicted RBP8.35□□□□□ -1.07
TMC1-201ENST00000297784 ZKSCAN2Q63HK3 967 aa8.35□□□□□ -1.07
TMC1-201ENST00000297784 SKAP1Q86WV1 359 aa8.35□□□□□ -1.07
TMC1-201ENST00000297784 VPS72Q15906 364 aa8.34□□□□□ -1.07
TMC1-201ENST00000297784 BARGINQ6ZT62 677 aa8.34□□□□□ -1.07
TMC1-201ENST00000297784 G2E3Q7L622 706 aa8.34□□□□□ -1.07
TMC1-201ENST00000297784 SLC4A2P04920 1241 aa8.34□□□□□ -1.07
TMC1-201ENST00000297784 TNS2Q63HR2 1409 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms