RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 LRSAM1Q6UWE0 723 aa16.65■□□□□ 0.26
COL1A2-201ENST00000297268 CCAR1Q8IX12 1150 aaKnown RBP16.65■□□□□ 0.26
COL1A2-201ENST00000297268 TRMT1Q9NXH9 659 aaKnown RBP16.65■□□□□ 0.26
COL1A2-201ENST00000297268 ZFYVE27Q5T4F4 411 aa16.65■□□□□ 0.26
COL1A2-201ENST00000297268 KIF6Q6ZMV9 814 aa16.64■□□□□ 0.26
COL1A2-201ENST00000297268 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.25
COL1A2-201ENST00000297268 CCDC141Q6ZP82 1450 aa16.64■□□□□ 0.25
COL1A2-201ENST00000297268 UVSSAQ2YD98 709 aa16.64■□□□□ 0.25
COL1A2-201ENST00000297268 IQCEQ6IPM2 695 aa16.64■□□□□ 0.25
COL1A2-201ENST00000297268 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.25
COL1A2-201ENST00000297268 LUC7LQ9NQ29 371 aaKnown RBP16.64■□□□□ 0.25
COL1A2-201ENST00000297268 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
COL1A2-201ENST00000297268 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
COL1A2-201ENST00000297268 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
COL1A2-201ENST00000297268 NACAP1Q9BZK3 213 aa16.64■□□□□ 0.25
COL1A2-201ENST00000297268 FAM177BA6PVY3 158 aa16.63■□□□□ 0.25
COL1A2-201ENST00000297268 ERLIN2O94905 339 aa16.63■□□□□ 0.25
COL1A2-201ENST00000297268 SLC3A2P08195 630 aaKnown RBP16.63■□□□□ 0.25
COL1A2-201ENST00000297268 CENPHQ9H3R5 247 aa16.63■□□□□ 0.25
COL1A2-201ENST00000297268 NOL7Q9UMY1 257 aaKnown RBP16.63■□□□□ 0.25
COL1A2-201ENST00000297268 PCDHB15Q9Y5E8 787 aa16.63■□□□□ 0.25
COL1A2-201ENST00000297268 SLC52A1Q9NWF4 448 aa16.63■□□□□ 0.25
COL1A2-201ENST00000297268 F6X3S4 739 aa16.63■□□□□ 0.25
COL1A2-201ENST00000297268 STX6O43752 255 aa16.63■□□□□ 0.25
COL1A2-201ENST00000297268 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
COL1A2-201ENST00000297268 USP8P40818 1118 aa16.63■□□□□ 0.25
COL1A2-201ENST00000297268 HDAC1Q13547 482 aaPredicted RBP16.63■□□□□ 0.25
COL1A2-201ENST00000297268 DDX19AQ9NUU7 478 aaKnown RBP16.63■□□□□ 0.25
COL1A2-201ENST00000297268 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 TTC22Q5TAA0 569 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 ZSCAN25Q6NSZ9 544 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 GBP3Q9H0R5 595 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 NEMFO60524 1076 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 CASQ1P31415 396 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 NUCB1Q02818 461 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 CALCOCO1Q9P1Z2 691 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 TXLNBQ8N3L3 684 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 TANGO6Q9C0B7 1094 aa16.62■□□□□ 0.25
COL1A2-201ENST00000297268 POLR3GO15318 223 aaPredicted RBP16.61■□□□□ 0.25
COL1A2-201ENST00000297268 CTAGE5O15320 804 aa16.61■□□□□ 0.25
COL1A2-201ENST00000297268 KRT18P05783 430 aaKnown RBP16.61■□□□□ 0.25
COL1A2-201ENST00000297268 GJB2P29033 226 aa16.61■□□□□ 0.25
COL1A2-201ENST00000297268 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
COL1A2-201ENST00000297268 ESCO1Q5FWF5 840 aa16.61■□□□□ 0.25
COL1A2-201ENST00000297268 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
COL1A2-201ENST00000297268 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
COL1A2-201ENST00000297268 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
COL1A2-201ENST00000297268 UBE2HP62256 183 aa16.6■□□□□ 0.25
COL1A2-201ENST00000297268 CCDC148Q8NFR7 591 aa16.6■□□□□ 0.25
COL1A2-201ENST00000297268 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
COL1A2-201ENST00000297268 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
COL1A2-201ENST00000297268 CCDC57Q2TAC2 916 aa16.6■□□□□ 0.25
COL1A2-201ENST00000297268 KIAA1328Q86T90 577 aa16.6■□□□□ 0.25
COL1A2-201ENST00000297268 FAM69CQ0P6D2 419 aa16.6■□□□□ 0.25
COL1A2-201ENST00000297268 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
COL1A2-201ENST00000297268 ZNF830Q96NB3 372 aaPredicted RBP16.6■□□□□ 0.25
COL1A2-201ENST00000297268 CRACR2AQ9BSW2 395 aa16.6■□□□□ 0.25
COL1A2-201ENST00000297268 TFIP11Q9UBB9 837 aaKnown RBP16.59■□□□□ 0.25
COL1A2-201ENST00000297268 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
COL1A2-201ENST00000297268 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
COL1A2-201ENST00000297268 SPG7Q9UQ90 795 aa16.59■□□□□ 0.25
COL1A2-201ENST00000297268 KIF5CO60282 957 aa16.59■□□□□ 0.25
COL1A2-201ENST00000297268 GUCY1B3Q02153 619 aa16.59■□□□□ 0.25
COL1A2-201ENST00000297268 WASF1Q92558 559 aa16.59■□□□□ 0.25
COL1A2-201ENST00000297268 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
COL1A2-201ENST00000297268 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
COL1A2-201ENST00000297268 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
COL1A2-201ENST00000297268 EIF5P55010 431 aaKnown RBP16.58■□□□□ 0.24
COL1A2-201ENST00000297268 SNX21Q969T3 373 aa16.58■□□□□ 0.24
COL1A2-201ENST00000297268 GSDMDP57764 484 aa16.58■□□□□ 0.24
COL1A2-201ENST00000297268 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
COL1A2-201ENST00000297268 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
COL1A2-201ENST00000297268 ATF3P18847 181 aa16.58■□□□□ 0.24
COL1A2-201ENST00000297268 ZNF165P49910 485 aa16.58■□□□□ 0.24
COL1A2-201ENST00000297268 NOLC1Q14978 699 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL1A2-201ENST00000297268 KIF4BQ2VIQ3 1234 aa16.58■□□□□ 0.24
COL1A2-201ENST00000297268 CABP4P57796 275 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL1A2-201ENST00000297268 GIMAP6Q6P9H5 292 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 SYCP1Q15431 976 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 STX1AQ16623 288 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 ZKSCAN5Q9Y2L8 839 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 GOLGA6L7A0A1B0GV03 622 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 JAKMIP3Q5VZ66 844 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 UBAC1Q9BSL1 405 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 PTPRCP08575 1304 aa16.57■□□□□ 0.24
COL1A2-201ENST00000297268 NUDT16Q96DE0 195 aaKnown RBP16.56■□□□□ 0.24
COL1A2-201ENST00000297268 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
COL1A2-201ENST00000297268 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
COL1A2-201ENST00000297268 SNAPC4Q5SXM2 1469 aa16.56■□□□□ 0.24
COL1A2-201ENST00000297268 TMC6Q7Z403 805 aa16.56■□□□□ 0.24
COL1A2-201ENST00000297268 EMILIN1Q9Y6C2 1016 aa16.56■□□□□ 0.24
COL1A2-201ENST00000297268 SCAF11Q99590 1463 aaKnown RBP16.56■□□□□ 0.24
COL1A2-201ENST00000297268 IKQ13123 557 aaPredicted RBP16.56■□□□□ 0.24
COL1A2-201ENST00000297268 TSHZ3Q63HK5 1081 aa16.56■□□□□ 0.24
COL1A2-201ENST00000297268 CEP131Q9UPN4 1083 aa16.56■□□□□ 0.24
COL1A2-201ENST00000297268 PAXBP1Q9Y5B6 917 aa16.56■□□□□ 0.24
COL1A2-201ENST00000297268 TDO2P48775 406 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms