RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 SYAP1Q96A49 352 aaPredicted RBP23.38■■□□□ 1.33
TRA2A-201ENST00000297071 STAG3Q9UJ98 1225 aa23.38■■□□□ 1.33
TRA2A-201ENST00000297071 AOX1Q06278 1338 aa23.37■■□□□ 1.33
TRA2A-201ENST00000297071 MEIS3Q99687 375 aa23.37■■□□□ 1.33
TRA2A-201ENST00000297071 TMEM63CQ9P1W3 806 aa23.37■■□□□ 1.33
TRA2A-201ENST00000297071 SOS1Q07889 1333 aaPredicted RBP23.37■■□□□ 1.33
TRA2A-201ENST00000297071 TTC21BQ7Z4L5 1316 aa23.37■■□□□ 1.33
TRA2A-201ENST00000297071 FBXO31Q5XUX0 539 aaPredicted RBP23.36■■□□□ 1.33
TRA2A-201ENST00000297071 TMX3Q96JJ7 454 aa23.36■■□□□ 1.33
TRA2A-201ENST00000297071 SRCIN1Q9C0H9 1055 aa23.36■■□□□ 1.33
TRA2A-201ENST00000297071 EIF4A2Q14240 407 aaKnown RBP23.35■■□□□ 1.33
TRA2A-201ENST00000297071 ESYT1Q9BSJ8 1104 aa23.35■■□□□ 1.33
TRA2A-201ENST00000297071 USP31Q70CQ4 1352 aa23.35■■□□□ 1.33
TRA2A-201ENST00000297071 PXDNLA1KZ92 1463 aa23.35■■□□□ 1.33
TRA2A-201ENST00000297071 STAP2Q9UGK3 403 aa23.34■■□□□ 1.33
TRA2A-201ENST00000297071 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.33
TRA2A-201ENST00000297071 DCTN1Q14203 1278 aa23.33■■□□□ 1.33
TRA2A-201ENST00000297071 UVSSAQ2YD98 709 aa23.33■■□□□ 1.33
TRA2A-201ENST00000297071 PHF14O94880 888 aa23.33■■□□□ 1.32
TRA2A-201ENST00000297071 ZRANB1Q9UGI0 708 aa23.33■■□□□ 1.32
TRA2A-201ENST00000297071 RRS1Q15050 365 aaKnown RBP23.32■■□□□ 1.32
TRA2A-201ENST00000297071 DYNC1I1O14576 645 aa23.31■■□□□ 1.32
TRA2A-201ENST00000297071 GNAI2P04899 355 aa23.31■■□□□ 1.32
TRA2A-201ENST00000297071 NEK4P51957 841 aa23.31■■□□□ 1.32
TRA2A-201ENST00000297071 VSIG10Q8N0Z9 540 aa23.31■■□□□ 1.32
TRA2A-201ENST00000297071 FAM184AQ8NB25 1140 aa23.31■■□□□ 1.32
TRA2A-201ENST00000297071 PLEKHG5O94827 1062 aa23.31■■□□□ 1.32
TRA2A-201ENST00000297071 SULT6B1Q6IMI4 303 aa23.31■■□□□ 1.32
TRA2A-201ENST00000297071 RBM27Q9P2N5 1060 aaKnown RBP23.31■■□□□ 1.32
TRA2A-201ENST00000297071 TMEM87AQ8NBN3 555 aa23.3■■□□□ 1.32
TRA2A-201ENST00000297071 TCHHQ07283 1943 aa23.29■■□□□ 1.32
TRA2A-201ENST00000297071 GNAI3P08754 354 aa23.29■■□□□ 1.32
TRA2A-201ENST00000297071 TSPY26PQ9H489 355 aa23.29■■□□□ 1.32
TRA2A-201ENST00000297071 SLC4A2P04920 1241 aa23.29■■□□□ 1.32
TRA2A-201ENST00000297071 METP08581 1390 aa23.28■■□□□ 1.32
TRA2A-201ENST00000297071 SYCE3A1L190 88 aa23.28■■□□□ 1.32
TRA2A-201ENST00000297071 HTATSF1O43719 755 aaKnown RBP23.28■■□□□ 1.32
TRA2A-201ENST00000297071 SASS6Q6UVJ0 657 aa23.28■■□□□ 1.32
TRA2A-201ENST00000297071 LRRCC1Q9C099 1032 aa23.28■■□□□ 1.32
TRA2A-201ENST00000297071 ZMYND15Q9H091 742 aa23.28■■□□□ 1.32
TRA2A-201ENST00000297071 CRYBG1Q9Y4K1 1723 aa23.28■■□□□ 1.32
TRA2A-201ENST00000297071 KDRP35968 1356 aa23.28■■□□□ 1.32
TRA2A-201ENST00000297071 PKNOX2Q96KN3 472 aa23.27■■□□□ 1.32
TRA2A-201ENST00000297071 PLEKHG3A1L390 1219 aa23.26■■□□□ 1.31
TRA2A-201ENST00000297071 CHMLP26374 656 aa23.26■■□□□ 1.31
TRA2A-201ENST00000297071 ATP8B2P98198 1209 aa23.26■■□□□ 1.31
TRA2A-201ENST00000297071 R3HCC1Q9Y3T6 440 aaKnown RBP23.26■■□□□ 1.31
TRA2A-201ENST00000297071 WDR33Q9C0J8 1336 aaKnown RBP23.26■■□□□ 1.31
TRA2A-201ENST00000297071 MX1P20591 662 aa23.26■■□□□ 1.31
TRA2A-201ENST00000297071 HDGFP51858 240 aaKnown RBP23.26■■□□□ 1.31
TRA2A-201ENST00000297071 AEBP1Q8IUX7 1158 aa23.26■■□□□ 1.31
TRA2A-201ENST00000297071 LETM1O95202 739 aaPredicted RBP23.25■■□□□ 1.31
TRA2A-201ENST00000297071 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
TRA2A-201ENST00000297071 RIMS1Q86UR5 1692 aaKnown RBP23.25■■□□□ 1.31
TRA2A-201ENST00000297071 BABAM1Q9NWV8 329 aa23.24■■□□□ 1.31
TRA2A-201ENST00000297071 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.24■■□□□ 1.31
TRA2A-201ENST00000297071 USP6P35125 1406 aa23.24■■□□□ 1.31
TRA2A-201ENST00000297071 NSFL1CQ9UNZ2 370 aaKnown RBP23.24■■□□□ 1.31
TRA2A-201ENST00000297071 USP54Q70EL1 1684 aa23.23■■□□□ 1.31
TRA2A-201ENST00000297071 PRR36Q9H6K5 1346 aa23.23■■□□□ 1.31
TRA2A-201ENST00000297071 MCM10Q7L590 875 aa23.23■■□□□ 1.31
TRA2A-201ENST00000297071 UQCRHLA0A096LP55 91 aa23.22■■□□□ 1.31
TRA2A-201ENST00000297071 UQCRHP07919 91 aa23.22■■□□□ 1.31
TRA2A-201ENST00000297071 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
TRA2A-201ENST00000297071 CHD2O14647 1828 aaKnown RBP23.21■■□□□ 1.31
TRA2A-201ENST00000297071 STK31Q9BXU1 1019 aa23.2■■□□□ 1.3
TRA2A-201ENST00000297071 UBR1Q8IWV7 1749 aa23.2■■□□□ 1.3
TRA2A-201ENST00000297071 HSPA4P34932 840 aa23.19■■□□□ 1.3
TRA2A-201ENST00000297071 KIAA2012Q0VF49 1180 aa23.19■■□□□ 1.3
TRA2A-201ENST00000297071 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
TRA2A-201ENST00000297071 TSPYL4Q9UJ04 414 aa23.19■■□□□ 1.3
TRA2A-201ENST00000297071 TTC21AQ8NDW8 1320 aa23.19■■□□□ 1.3
TRA2A-201ENST00000297071 RPAP1Q9BWH6 1393 aaPredicted RBP23.19■■□□□ 1.3
TRA2A-201ENST00000297071 APBB1O00213 710 aa23.19■■□□□ 1.3
TRA2A-201ENST00000297071 G2E3Q7L622 706 aa23.19■■□□□ 1.3
TRA2A-201ENST00000297071 SBNO1A3KN83 1393 aa23.19■■□□□ 1.3
TRA2A-201ENST00000297071 PTPRUQ92729 1446 aa23.18■■□□□ 1.3
TRA2A-201ENST00000297071 RAB11FIP3O75154 756 aa23.18■■□□□ 1.3
TRA2A-201ENST00000297071 CCDC30Q5VVM6 783 aa23.18■■□□□ 1.3
TRA2A-201ENST00000297071 TXNDC2Q86VQ3 553 aa23.18■■□□□ 1.3
TRA2A-201ENST00000297071 RTF1Q92541 710 aaKnown RBP23.18■■□□□ 1.3
TRA2A-201ENST00000297071 PALD1Q9ULE6 856 aa23.18■■□□□ 1.3
TRA2A-201ENST00000297071 CCDC183Q5T5S1 534 aa23.17■■□□□ 1.3
TRA2A-201ENST00000297071 PRIMPOLQ96LW4 560 aa23.17■■□□□ 1.3
TRA2A-201ENST00000297071 FLT4P35916 1363 aa23.17■■□□□ 1.3
TRA2A-201ENST00000297071 ANO2Q9NQ90 1003 aa23.16■■□□□ 1.3
TRA2A-201ENST00000297071 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
TRA2A-201ENST00000297071 CERKQ8TCT0 537 aa23.15■■□□□ 1.3
TRA2A-201ENST00000297071 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
TRA2A-201ENST00000297071 SSH3Q8TE77 659 aa23.15■■□□□ 1.3
TRA2A-201ENST00000297071 ACEP12821 1306 aa23.14■■□□□ 1.29
TRA2A-201ENST00000297071 MAP3K19Q56UN5 1328 aa23.14■■□□□ 1.29
TRA2A-201ENST00000297071 HMGN5P82970 282 aaKnown RBP23.14■■□□□ 1.29
TRA2A-201ENST00000297071 FLIIQ13045 1269 aa23.14■■□□□ 1.29
TRA2A-201ENST00000297071 SLC4A10Q6U841 1118 aa23.14■■□□□ 1.29
TRA2A-201ENST00000297071 F6X3S4 739 aa23.13■■□□□ 1.29
TRA2A-201ENST00000297071 MTHFSDQ2M296 383 aaKnown RBP23.13■■□□□ 1.29
TRA2A-201ENST00000297071 HSP90AB2PQ58FF8 381 aa23.13■■□□□ 1.29
TRA2A-201ENST00000297071 USP48Q86UV5 1035 aa23.13■■□□□ 1.29
TRA2A-201ENST00000297071 MYRIPQ8NFW9 859 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms