RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 ANKRD20A12PQ8NF67 263 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 ATP5J2-PTCD1G3V325 749 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 TPM2P07951 284 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 CTNNA3Q9UI47 895 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 GPTP24298 496 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 RNF214Q8ND24 703 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 ARID3AQ99856 593 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 RAI14Q9P0K7 980 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 AKAP2Q9Y2D5 859 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 ZPR1O75312 459 aa18.02■□□□□ 0.47
ARHGEF28-202ENST00000296799 HSP90AB3PQ58FF7 597 aa18.02■□□□□ 0.47
ARHGEF28-202ENST00000296799 UPF3BQ9BZI7 483 aaKnown RBP18.02■□□□□ 0.47
ARHGEF28-202ENST00000296799 ATP7AQ04656 1500 aa18.02■□□□□ 0.47
ARHGEF28-202ENST00000296799 GCP02774 474 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 LRRC59Q96AG4 307 aaKnown RBP18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 UBE3BQ7Z3V4 1068 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 TDO2P48775 406 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 CEBPZQ03701 1054 aaKnown RBP18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 FLT4P35916 1363 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 KRT32Q14532 448 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 PHACTR3Q96KR7 559 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 ATP10AO60312 1499 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 LARP1BQ659C4 914 aaKnown RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 PIK3R4Q99570 1358 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 IFIT1P09914 478 aaKnown RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 SLC39A6Q13433 755 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 PDRG1Q9NUG6 133 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 IGHDP01880 384 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 ZCRB1Q8TBF4 217 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 PPP1R42Q7Z4L9 355 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 PCMTD1Q96MG8 357 aaPredicted RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 EIF2AK4Q9P2K8 1649 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 MAP3K19Q56UN5 1328 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 WDR33Q9C0J8 1336 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 ATP2B2Q01814 1243 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 EYA1Q99502 592 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 MAGI3Q5TCQ9 1506 aa17.98■□□□□ 0.47
ARHGEF28-202ENST00000296799 STK38Q15208 465 aa17.98■□□□□ 0.47
ARHGEF28-202ENST00000296799 MEIS3Q99687 375 aa17.98■□□□□ 0.47
ARHGEF28-202ENST00000296799 AIDAQ96BJ3 306 aa17.98■□□□□ 0.47
ARHGEF28-202ENST00000296799 CCDC43Q96MW1 224 aaKnown RBP17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 CEP89Q96ST8 783 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 AKAP4Q5JQC9 854 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 NOC3LQ8WTT2 800 aaKnown RBP17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 NUP133Q8WUM0 1156 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 CHPF2Q9P2E5 772 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 UHRF1BP1Q6BDS2 1440 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 ABCC1P33527 1531 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 CASTP20810 708 aaKnown RBP17.96■□□□□ 0.47
ARHGEF28-202ENST00000296799 MRE11P49959 708 aa17.96■□□□□ 0.47
ARHGEF28-202ENST00000296799 TOM1O60784 492 aa17.96■□□□□ 0.47
ARHGEF28-202ENST00000296799 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
ARHGEF28-202ENST00000296799 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 ZSCAN31Q96LW9 406 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 ECHDC1Q9NTX5 307 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 PIK3C2GO75747 1445 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 NASPP49321 788 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 PDE4CQ08493 712 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 PRPF40BQ6NWY9 871 aaKnown RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 JARID2Q92833 1246 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 ZNF396Q96N95 335 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 UBAP1LF5GYI3 381 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 RBM5P52756 815 aaKnown RBP eCLIP17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 KRT85P78386 507 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 IMMTQ16891 758 aaKnown RBP17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 TSPYL6Q8N831 410 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 ANKRD18BA2A2Z9 1011 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 KRT24Q2M2I5 525 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 COL17A1Q9UMD9 1497 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 BMP2KLQ5H9B9 411 aa17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 NAT10Q9H0A0 1025 aaKnown RBP17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 VAMP4O75379 141 aa17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 CCAR2Q8N163 923 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 JMYQ8N9B5 988 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 ZNF592Q92610 1267 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 OLFM4Q6UX06 510 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 NFATC2IPQ8NCF5 419 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 ORAI2Q96SN7 254 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 ME1P48163 572 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms