RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 RGPD5Q99666 1765 aa11.51□□□□□ -0.57
UBLCP1-201ENST00000296786 GNAI2P04899 355 aa11.51□□□□□ -0.57
UBLCP1-201ENST00000296786 SDSP20132 328 aa11.51□□□□□ -0.57
UBLCP1-201ENST00000296786 IP6K1Q92551 441 aa11.51□□□□□ -0.57
UBLCP1-201ENST00000296786 EIF5BO60841 1220 aaKnown RBP11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 ESCO1Q5FWF5 840 aa11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 BABAM1Q9NWV8 329 aa11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 PXDNLA1KZ92 1463 aa11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 K7ELQ4 463 aaPredicted RBP11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 PSME1Q06323 249 aa11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
UBLCP1-201ENST00000296786 CEMIPQ8WUJ3 1361 aa11.49□□□□□ -0.57
UBLCP1-201ENST00000296786 EXOC6BQ9Y2D4 811 aa11.49□□□□□ -0.57
UBLCP1-201ENST00000296786 GNAI3P08754 354 aa11.49□□□□□ -0.57
UBLCP1-201ENST00000296786 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
UBLCP1-201ENST00000296786 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 HSP90AA1P07900 732 aaKnown RBP11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 TRPM3Q9HCF6 1732 aaPredicted RBP11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 CASC1Q6TDU7 716 aa11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 KCNH5Q8NCM2 988 aa11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 OSBPL3Q9H4L5 887 aa11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
UBLCP1-201ENST00000296786 PDE1AP54750 535 aa11.47□□□□□ -0.57
UBLCP1-201ENST00000296786 SIPA1L3O60292 1781 aaPredicted RBP11.47□□□□□ -0.57
UBLCP1-201ENST00000296786 RABEP1Q15276 862 aa11.47□□□□□ -0.57
UBLCP1-201ENST00000296786 TNPO1Q92973 898 aaKnown RBP11.47□□□□□ -0.57
UBLCP1-201ENST00000296786 PHAXQ9H814 394 aaKnown RBP11.47□□□□□ -0.57
UBLCP1-201ENST00000296786 LGR6Q9HBX8 967 aa11.47□□□□□ -0.57
UBLCP1-201ENST00000296786 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.57
UBLCP1-201ENST00000296786 ATP8B2P98198 1209 aa11.46□□□□□ -0.57
UBLCP1-201ENST00000296786 RAB3GAP1Q15042 981 aa11.46□□□□□ -0.57
UBLCP1-201ENST00000296786 LRRC59Q96AG4 307 aaKnown RBP11.46□□□□□ -0.57
UBLCP1-201ENST00000296786 LRRCC1Q9C099 1032 aa11.46□□□□□ -0.57
UBLCP1-201ENST00000296786 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
UBLCP1-201ENST00000296786 LRRFIP2Q9Y608 721 aaKnown RBP11.46□□□□□ -0.57
UBLCP1-201ENST00000296786 SLIT3O75094 1523 aa11.46□□□□□ -0.58
UBLCP1-201ENST00000296786 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.58
UBLCP1-201ENST00000296786 SALL3Q9BXA9 1300 aa11.46□□□□□ -0.58
UBLCP1-201ENST00000296786 TRAK2O60296 914 aa11.46□□□□□ -0.58
UBLCP1-201ENST00000296786 USP44Q9H0E7 712 aa11.46□□□□□ -0.58
UBLCP1-201ENST00000296786 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.58
UBLCP1-201ENST00000296786 IBTKQ9P2D0 1353 aaPredicted RBP11.45□□□□□ -0.58
UBLCP1-201ENST00000296786 EIF4A1P60842 406 aaKnown RBP11.45□□□□□ -0.58
UBLCP1-201ENST00000296786 XPCQ01831 940 aaPredicted RBP11.45□□□□□ -0.58
UBLCP1-201ENST00000296786 TSHZ3Q63HK5 1081 aa11.45□□□□□ -0.58
UBLCP1-201ENST00000296786 ORAI2Q96SN7 254 aa11.45□□□□□ -0.58
UBLCP1-201ENST00000296786 GZF1Q9H116 711 aaPredicted RBP11.45□□□□□ -0.58
UBLCP1-201ENST00000296786 REC8O95072 547 aa11.45□□□□□ -0.58
UBLCP1-201ENST00000296786 EIF2S2P20042 333 aaKnown RBP11.45□□□□□ -0.58
UBLCP1-201ENST00000296786 PXDNQ92626 1479 aa11.44□□□□□ -0.58
UBLCP1-201ENST00000296786 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
UBLCP1-201ENST00000296786 UBTFL1P0CB47 393 aaPredicted RBP11.44□□□□□ -0.58
UBLCP1-201ENST00000296786 ZNF530Q6P9A1 599 aaPredicted RBP11.44□□□□□ -0.58
UBLCP1-201ENST00000296786 KIF1AQ12756 1690 aa11.44□□□□□ -0.58
UBLCP1-201ENST00000296786 ERC2O15083 957 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 GCP02774 474 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 MX1P20591 662 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 AKAP4Q5JQC9 854 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 NCAPD2Q15021 1401 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 KCNQ3O43525 872 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 HOXB7P09629 217 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 TEFQ10587 303 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 L1TD1Q5T7N2 865 aaKnown RBP11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 GBP4Q96PP9 640 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
UBLCP1-201ENST00000296786 BTBD11A6QL63 1104 aa11.42□□□□□ -0.58
UBLCP1-201ENST00000296786 MPRIPQ6WCQ1 1025 aa11.42□□□□□ -0.58
UBLCP1-201ENST00000296786 ARHGEF25Q86VW2 580 aa11.42□□□□□ -0.58
UBLCP1-201ENST00000296786 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
UBLCP1-201ENST00000296786 ALS2Q96Q42 1657 aa11.42□□□□□ -0.58
UBLCP1-201ENST00000296786 PLEKHO1Q53GL0 409 aaPredicted RBP11.42□□□□□ -0.58
UBLCP1-201ENST00000296786 LMOD2Q6P5Q4 547 aa11.42□□□□□ -0.58
UBLCP1-201ENST00000296786 SCN11AQ9UI33 1791 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 ARXQ96QS3 562 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 ADAMTS7Q9UKP4 1686 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 FSD2A1L4K1 749 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 SSFA2P28290 1259 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 AMOTQ4VCS5 1084 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 ANKRD24Q8TF21 1146 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 CRYBG1Q9Y4K1 1723 aa11.41□□□□□ -0.58
UBLCP1-201ENST00000296786 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 TRIM6-TRIM34B2RNG4 842 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 ST18O60284 1047 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 ANXA1P04083 346 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 C1orf141Q5JVX7 400 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 PPP1R42Q7Z4L9 355 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 DNAAF4Q8WXU2 420 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 STAP2Q9UGK3 403 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 RNMTO43148 476 aaKnown RBP11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 NBPF7P0C2Y1 421 aaPredicted RBP11.4□□□□□ -0.58
UBLCP1-201ENST00000296786 RILPL2Q969X0 211 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms