RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 PTPRCP08575 1304 aa20.37■□□□□ 0.85
CDCP1-201ENST00000296129 AKAP2Q9Y2D5 859 aa20.36■□□□□ 0.85
CDCP1-201ENST00000296129 TNRQ92752 1358 aa20.36■□□□□ 0.85
CDCP1-201ENST00000296129 KRT28Q7Z3Y7 464 aa20.36■□□□□ 0.85
CDCP1-201ENST00000296129 FBLN1P23142 703 aa20.35■□□□□ 0.85
CDCP1-201ENST00000296129 FLIIQ13045 1269 aa20.35■□□□□ 0.85
CDCP1-201ENST00000296129 MCM4P33991 863 aa20.35■□□□□ 0.85
CDCP1-201ENST00000296129 HYPKQ9NX55 129 aa20.35■□□□□ 0.85
CDCP1-201ENST00000296129 CCAR1Q8IX12 1150 aaKnown RBP20.35■□□□□ 0.85
CDCP1-201ENST00000296129 DDX11Q96FC9 970 aa20.35■□□□□ 0.85
CDCP1-201ENST00000296129 SERPINC1P01008 464 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 SF3B2Q13435 895 aaKnown RBP20.34■□□□□ 0.85
CDCP1-201ENST00000296129 SMARCE1Q969G3 411 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 CCDC8Q9H0W5 538 aaPredicted RBP20.34■□□□□ 0.85
CDCP1-201ENST00000296129 GRPEL1Q9HAV7 217 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 DBF4Q9UBU7 674 aaPredicted RBP20.34■□□□□ 0.85
CDCP1-201ENST00000296129 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 CAGE1Q8TC20 777 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 ABCF2Q9UG63 623 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 ASXL1Q8IXJ9 1541 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 TEX35Q5T0J7 233 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 KIAA0556O60303 1618 aa20.34■□□□□ 0.85
CDCP1-201ENST00000296129 NOL7Q9UMY1 257 aaKnown RBP20.33■□□□□ 0.85
CDCP1-201ENST00000296129 CCDC83Q8IWF9 413 aa20.33■□□□□ 0.85
CDCP1-201ENST00000296129 A2MP01023 1474 aa20.33■□□□□ 0.84
CDCP1-201ENST00000296129 ZNF652Q9Y2D9 606 aa20.33■□□□□ 0.84
CDCP1-201ENST00000296129 IFIT1P09914 478 aaKnown RBP20.33■□□□□ 0.84
CDCP1-201ENST00000296129 RUFY1Q96T51 708 aa20.33■□□□□ 0.84
CDCP1-201ENST00000296129 UPF3BQ9BZI7 483 aaKnown RBP20.32■□□□□ 0.84
CDCP1-201ENST00000296129 CFAP45Q9UL16 551 aa20.32■□□□□ 0.84
CDCP1-201ENST00000296129 PRAG1Q86YV5 1406 aa20.32■□□□□ 0.84
CDCP1-201ENST00000296129 PIP4K2AP48426 406 aaPredicted RBP20.32■□□□□ 0.84
CDCP1-201ENST00000296129 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
CDCP1-201ENST00000296129 MAP3K2Q9Y2U5 619 aa20.32■□□□□ 0.84
CDCP1-201ENST00000296129 PIBF1Q8WXW3 757 aa20.31■□□□□ 0.84
CDCP1-201ENST00000296129 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
CDCP1-201ENST00000296129 DACH1Q9UI36 760 aa20.31■□□□□ 0.84
CDCP1-201ENST00000296129 MPNDQ8N594 471 aa20.31■□□□□ 0.84
CDCP1-201ENST00000296129 ODF2Q5BJF6 829 aa20.3■□□□□ 0.84
CDCP1-201ENST00000296129 NUP62CLQ9H1M0 184 aa20.3■□□□□ 0.84
CDCP1-201ENST00000296129 U3KPZ7 1027 aaPredicted RBP20.3■□□□□ 0.84
CDCP1-201ENST00000296129 IFIT5Q13325 482 aaKnown RBP20.3■□□□□ 0.84
CDCP1-201ENST00000296129 CFAP43Q8NDM7 1665 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 ZSCAN29Q8IWY8 852 aaPredicted RBP20.29■□□□□ 0.84
CDCP1-201ENST00000296129 IL16Q14005 1332 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 NUP160Q12769 1436 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 CCP110O43303 1012 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 PPIP5K1Q6PFW1 1433 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 WDR7Q9Y4E6 1490 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 ZPR1O75312 459 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 AK7Q96M32 723 aa20.29■□□□□ 0.84
CDCP1-201ENST00000296129 TRMT112Q9UI30 125 aaKnown RBP20.29■□□□□ 0.84
CDCP1-201ENST00000296129 A0A087WZG4 1122 aa20.28■□□□□ 0.84
CDCP1-201ENST00000296129 TCOF1Q13428 1488 aaKnown RBP20.28■□□□□ 0.84
CDCP1-201ENST00000296129 ZNF518AQ6AHZ1 1483 aa20.28■□□□□ 0.84
CDCP1-201ENST00000296129 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
CDCP1-201ENST00000296129 WASF1Q92558 559 aa20.28■□□□□ 0.84
CDCP1-201ENST00000296129 WDR62O43379 1518 aa20.28■□□□□ 0.84
CDCP1-201ENST00000296129 TMEM132AQ24JP5 1023 aa20.28■□□□□ 0.84
CDCP1-201ENST00000296129 ACBD3Q9H3P7 528 aa20.28■□□□□ 0.84
CDCP1-201ENST00000296129 ZHX3Q9H4I2 956 aa20.28■□□□□ 0.84
CDCP1-201ENST00000296129 IGHDP01880 384 aa20.27■□□□□ 0.84
CDCP1-201ENST00000296129 ZFYVE27Q5T4F4 411 aa20.27■□□□□ 0.84
CDCP1-201ENST00000296129 ZBTB3Q9H5J0 574 aa20.27■□□□□ 0.84
CDCP1-201ENST00000296129 SETQ01105 290 aaPredicted RBP20.27■□□□□ 0.84
CDCP1-201ENST00000296129 CAVIN4Q5BKX8 364 aa20.27■□□□□ 0.84
CDCP1-201ENST00000296129 FERMT3Q86UX7 667 aa20.27■□□□□ 0.84
CDCP1-201ENST00000296129 STIM1Q13586 685 aa20.27■□□□□ 0.83
CDCP1-201ENST00000296129 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.83
CDCP1-201ENST00000296129 PIK3R4Q99570 1358 aa20.26■□□□□ 0.83
CDCP1-201ENST00000296129 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
CDCP1-201ENST00000296129 HSP90AB2PQ58FF8 381 aa20.25■□□□□ 0.83
CDCP1-201ENST00000296129 EIF2AK4Q9P2K8 1649 aaKnown RBP20.25■□□□□ 0.83
CDCP1-201ENST00000296129 RIMS2Q9UQ26 1411 aa20.25■□□□□ 0.83
CDCP1-201ENST00000296129 MINDY4BA8MYZ0 360 aa20.25■□□□□ 0.83
CDCP1-201ENST00000296129 PPFIBP1Q86W92 1011 aa20.25■□□□□ 0.83
CDCP1-201ENST00000296129 GPTP24298 496 aa20.25■□□□□ 0.83
CDCP1-201ENST00000296129 VSIG10Q8N0Z9 540 aa20.24■□□□□ 0.83
CDCP1-201ENST00000296129 ANKRD18BA2A2Z9 1011 aa20.24■□□□□ 0.83
CDCP1-201ENST00000296129 UHRF1BP1LA0JNW5 1464 aa20.24■□□□□ 0.83
CDCP1-201ENST00000296129 HSP90B2PQ58FF3 399 aa20.24■□□□□ 0.83
CDCP1-201ENST00000296129 SLC5A1P13866 664 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 SYCE3A1L190 88 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 USP5P45974 858 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 CHRNA2Q15822 529 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 CAMK4Q16566 473 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 TBC1D9Q6ZT07 1266 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 CEP57L1Q8IYX8 460 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 NAPBQ9H115 298 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 ZNHIT6Q9NWK9 470 aaKnown RBP20.23■□□□□ 0.83
CDCP1-201ENST00000296129 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
CDCP1-201ENST00000296129 PDIA4P13667 645 aaKnown RBP20.23■□□□□ 0.83
CDCP1-201ENST00000296129 EXOC5O00471 708 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 TANGO6Q9C0B7 1094 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 TEX14Q8IWB6 1497 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 TTC21AQ8NDW8 1320 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 ANKIB1Q9P2G1 1089 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms