RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
PPP1CB-201ENST00000296122 ABCC4O15439 1325 aa16.45■□□□□ 0.22
PPP1CB-201ENST00000296122 IL2RBP14784 551 aa16.45■□□□□ 0.22
PPP1CB-201ENST00000296122 DBF4Q9UBU7 674 aaPredicted RBP16.45■□□□□ 0.22
PPP1CB-201ENST00000296122 ZBTB7BO15156 539 aaPredicted RBP16.44■□□□□ 0.22
PPP1CB-201ENST00000296122 WDR17Q8IZU2 1322 aa16.44■□□□□ 0.22
PPP1CB-201ENST00000296122 APBB1O00213 710 aa16.44■□□□□ 0.22
PPP1CB-201ENST00000296122 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
PPP1CB-201ENST00000296122 BACH2Q9BYV9 841 aa16.44■□□□□ 0.22
PPP1CB-201ENST00000296122 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
PPP1CB-201ENST00000296122 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
PPP1CB-201ENST00000296122 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
PPP1CB-201ENST00000296122 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
PPP1CB-201ENST00000296122 INTS3Q68E01 1043 aaKnown RBP16.43■□□□□ 0.22
PPP1CB-201ENST00000296122 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
PPP1CB-201ENST00000296122 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
PPP1CB-201ENST00000296122 PHKG2P15735 406 aa16.43■□□□□ 0.22
PPP1CB-201ENST00000296122 LTN1O94822 1766 aa16.43■□□□□ 0.22
PPP1CB-201ENST00000296122 CPDO75976 1380 aa16.43■□□□□ 0.22
PPP1CB-201ENST00000296122 GNAI2P04899 355 aa16.42■□□□□ 0.22
PPP1CB-201ENST00000296122 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
PPP1CB-201ENST00000296122 G2E3Q7L622 706 aa16.42■□□□□ 0.22
PPP1CB-201ENST00000296122 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
PPP1CB-201ENST00000296122 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
PPP1CB-201ENST00000296122 BTG4Q9NY30 223 aa16.42■□□□□ 0.22
PPP1CB-201ENST00000296122 ADAMTS2O95450 1211 aa16.42■□□□□ 0.22
PPP1CB-201ENST00000296122 DDRGK1Q96HY6 314 aa16.42■□□□□ 0.22
PPP1CB-201ENST00000296122 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
PPP1CB-201ENST00000296122 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
PPP1CB-201ENST00000296122 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
PPP1CB-201ENST00000296122 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
PPP1CB-201ENST00000296122 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
PPP1CB-201ENST00000296122 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
PPP1CB-201ENST00000296122 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
PPP1CB-201ENST00000296122 MYT1Q01538 1121 aa16.4■□□□□ 0.22
PPP1CB-201ENST00000296122 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
PPP1CB-201ENST00000296122 ARXQ96QS3 562 aa16.4■□□□□ 0.22
PPP1CB-201ENST00000296122 CARD10Q9BWT7 1032 aa16.4■□□□□ 0.22
PPP1CB-201ENST00000296122 C9orf78Q9NZ63 289 aaPredicted RBP16.4■□□□□ 0.22
PPP1CB-201ENST00000296122 UBAP1LF5GYI3 381 aa16.4■□□□□ 0.22
PPP1CB-201ENST00000296122 PXDNQ92626 1479 aa16.4■□□□□ 0.22
PPP1CB-201ENST00000296122 CEMIPQ8WUJ3 1361 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 KCNQ3O43525 872 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 ZNF790Q6PG37 636 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 RIC3Q7Z5B4 369 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 LARP1Q6PKG0 1096 aaKnown RBP16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 CHD1LQ86WJ1 897 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 MEIS3Q99687 375 aa16.39■□□□□ 0.21
PPP1CB-201ENST00000296122 OS9Q13438 667 aaPredicted RBP16.38■□□□□ 0.21
PPP1CB-201ENST00000296122 DNAAF4Q8WXU2 420 aa16.38■□□□□ 0.21
PPP1CB-201ENST00000296122 ANXA1P04083 346 aa16.37■□□□□ 0.21
PPP1CB-201ENST00000296122 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
PPP1CB-201ENST00000296122 SMC5Q8IY18 1101 aa16.37■□□□□ 0.21
PPP1CB-201ENST00000296122 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
PPP1CB-201ENST00000296122 MYL6BP14649 208 aa16.37■□□□□ 0.21
PPP1CB-201ENST00000296122 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
PPP1CB-201ENST00000296122 ZNF330Q9Y3S2 320 aaPredicted RBP16.37■□□□□ 0.21
PPP1CB-201ENST00000296122 PI4KAP2A4QPH2 592 aa16.36■□□□□ 0.21
PPP1CB-201ENST00000296122 PI4KAP1Q8N8J0 262 aa16.36■□□□□ 0.21
PPP1CB-201ENST00000296122 PHAXQ9H814 394 aaKnown RBP16.36■□□□□ 0.21
PPP1CB-201ENST00000296122 STRCP1A6NGW2 1772 aa16.36■□□□□ 0.21
PPP1CB-201ENST00000296122 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
PPP1CB-201ENST00000296122 GIGYF1O75420 1035 aaPredicted RBP16.36■□□□□ 0.21
PPP1CB-201ENST00000296122 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
PPP1CB-201ENST00000296122 STRCQ7RTU9 1775 aa16.35■□□□□ 0.21
PPP1CB-201ENST00000296122 EXOC5O00471 708 aa16.35■□□□□ 0.21
PPP1CB-201ENST00000296122 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
PPP1CB-201ENST00000296122 MED1Q15648 1581 aaPredicted RBP16.35■□□□□ 0.21
PPP1CB-201ENST00000296122 TRPM3Q9HCF6 1732 aaPredicted RBP16.34■□□□□ 0.21
PPP1CB-201ENST00000296122 CYP27B1O15528 508 aa16.34■□□□□ 0.21
PPP1CB-201ENST00000296122 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
PPP1CB-201ENST00000296122 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.21
PPP1CB-201ENST00000296122 IPO9Q96P70 1041 aaKnown RBP16.33■□□□□ 0.21
PPP1CB-201ENST00000296122 NUCB1Q02818 461 aa16.33■□□□□ 0.2
PPP1CB-201ENST00000296122 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
PPP1CB-201ENST00000296122 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
PPP1CB-201ENST00000296122 ZNF496Q96IT1 587 aaPredicted RBP16.32■□□□□ 0.2
PPP1CB-201ENST00000296122 ERVV-2B6SEH9 535 aa16.31■□□□□ 0.2
PPP1CB-201ENST00000296122 CEP85Q6P2H3 762 aa16.31■□□□□ 0.2
PPP1CB-201ENST00000296122 KSR2Q6VAB6 950 aa16.31■□□□□ 0.2
PPP1CB-201ENST00000296122 OVOS2A0A0G2JMS6 1433 aa16.31■□□□□ 0.2
PPP1CB-201ENST00000296122 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
PPP1CB-201ENST00000296122 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
PPP1CB-201ENST00000296122 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
PPP1CB-201ENST00000296122 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
PPP1CB-201ENST00000296122 BECN1Q14457 450 aa16.3■□□□□ 0.2
PPP1CB-201ENST00000296122 MEGF6O75095 1541 aa16.3■□□□□ 0.2
PPP1CB-201ENST00000296122 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
PPP1CB-201ENST00000296122 HSP90AB4PQ58FF6 505 aa16.29■□□□□ 0.2
PPP1CB-201ENST00000296122 DCTPP1Q9H773 170 aa16.29■□□□□ 0.2
PPP1CB-201ENST00000296122 MARF1Q9Y4F3 1742 aaKnown RBP16.29■□□□□ 0.2
PPP1CB-201ENST00000296122 SURF6O75683 361 aaKnown RBP16.28■□□□□ 0.2
PPP1CB-201ENST00000296122 ALDH1L1O75891 902 aa16.28■□□□□ 0.2
PPP1CB-201ENST00000296122 NGLY1Q96IV0 654 aa16.28■□□□□ 0.2
PPP1CB-201ENST00000296122 PLEKHG2Q9H7P9 1386 aa16.28■□□□□ 0.2
PPP1CB-201ENST00000296122 MEX3CQ5U5Q3 659 aaKnown RBP16.28■□□□□ 0.2
PPP1CB-201ENST00000296122 XAGE3Q8WTP9 111 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms