RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 SENP3-EIF4A1A0A087X0R7 540 aa29.62■■■□□ 2.33
LINC01116-201ENST00000295549 WWC1Q8IX03 1113 aa29.62■■■□□ 2.33
LINC01116-201ENST00000295549 ITGB4P16144 1822 aa29.61■■■□□ 2.33
LINC01116-201ENST00000295549 PLSCR1O15162 318 aa29.61■■■□□ 2.33
LINC01116-201ENST00000295549 TAF7Q15545 349 aaPredicted RBP29.61■■■□□ 2.33
LINC01116-201ENST00000295549 SMARCC1Q92922 1105 aaPredicted RBP29.59■■■□□ 2.33
LINC01116-201ENST00000295549 CALD1Q05682 793 aaKnown RBP29.58■■■□□ 2.33
LINC01116-201ENST00000295549 ATG3Q9NT62 314 aa29.58■■■□□ 2.33
LINC01116-201ENST00000295549 ASAP1Q9ULH1 1129 aa29.58■■■□□ 2.33
LINC01116-201ENST00000295549 SALL2Q9Y467 1007 aaPredicted RBP29.58■■■□□ 2.33
LINC01116-201ENST00000295549 TNS1Q9HBL0 1735 aaKnown RBP29.57■■■□□ 2.32
LINC01116-201ENST00000295549 BTAF1O14981 1849 aa29.57■■■□□ 2.32
LINC01116-201ENST00000295549 BTBD11A6QL63 1104 aa29.56■■■□□ 2.32
LINC01116-201ENST00000295549 BAG6P46379 1132 aa29.56■■■□□ 2.32
LINC01116-201ENST00000295549 VIRMAQ69YN4 1812 aaKnown RBP29.56■■■□□ 2.32
LINC01116-201ENST00000295549 BABAM1Q9NWV8 329 aa29.55■■■□□ 2.32
LINC01116-201ENST00000295549 PALLDQ8WX93 1383 aa29.54■■■□□ 2.32
LINC01116-201ENST00000295549 WDR63Q8IWG1 891 aa29.54■■■□□ 2.32
LINC01116-201ENST00000295549 SIPA1L3O60292 1781 aaPredicted RBP29.53■■■□□ 2.32
LINC01116-201ENST00000295549 SOCS7O14512 581 aa29.53■■■□□ 2.32
LINC01116-201ENST00000295549 SLC39A6Q13433 755 aa29.53■■■□□ 2.32
LINC01116-201ENST00000295549 ZNF790Q6PG37 636 aa29.53■■■□□ 2.32
LINC01116-201ENST00000295549 CAMKK2Q96RR4 588 aa29.53■■■□□ 2.32
LINC01116-201ENST00000295549 CFAP44Q96MT7 982 aa29.52■■■□□ 2.32
LINC01116-201ENST00000295549 ZNF521Q96K83 1311 aa29.51■■■□□ 2.32
LINC01116-201ENST00000295549 CHL1O00533 1208 aa29.51■■■□□ 2.31
LINC01116-201ENST00000295549 EN1Q05925 392 aaPredicted RBP29.51■■■□□ 2.31
LINC01116-201ENST00000295549 TTC5Q8N0Z6 440 aa29.51■■■□□ 2.31
LINC01116-201ENST00000295549 MIS18AQ9NYP9 233 aa29.51■■■□□ 2.31
LINC01116-201ENST00000295549 IL16Q14005 1332 aa29.51■■■□□ 2.31
LINC01116-201ENST00000295549 ZNF853P0CG23 659 aa29.5■■■□□ 2.31
LINC01116-201ENST00000295549 DEFB132Q7Z7B7 95 aa29.5■■■□□ 2.31
LINC01116-201ENST00000295549 IFT57Q9NWB7 429 aa29.5■■■□□ 2.31
LINC01116-201ENST00000295549 GNAI1P63096 354 aa29.48■■■□□ 2.31
LINC01116-201ENST00000295549 HNRNPUQ00839 825 aaKnown RBP eCLIP29.48■■■□□ 2.31
LINC01116-201ENST00000295549 PROM2Q8N271 834 aa29.48■■■□□ 2.31
LINC01116-201ENST00000295549 TSPYL4Q9UJ04 414 aa29.48■■■□□ 2.31
LINC01116-201ENST00000295549 SLC27A3Q5K4L6 730 aa29.47■■■□□ 2.31
LINC01116-201ENST00000295549 PAPPAQ13219 1627 aa29.46■■■□□ 2.31
LINC01116-201ENST00000295549 LOC102724428A0A0B4J2F2 783 aa29.46■■■□□ 2.31
LINC01116-201ENST00000295549 KCNQ3O43525 872 aa29.46■■■□□ 2.31
LINC01116-201ENST00000295549 SIK1P57059 783 aa29.46■■■□□ 2.31
LINC01116-201ENST00000295549 EZH2Q15910 746 aaKnown RBP29.46■■■□□ 2.31
LINC01116-201ENST00000295549 TXNRD1Q16881 649 aa29.46■■■□□ 2.31
LINC01116-201ENST00000295549 RGPD3A6NKT7 1758 aaPredicted RBP29.45■■■□□ 2.31
LINC01116-201ENST00000295549 RGPD4Q7Z3J3 1758 aa29.45■■■□□ 2.31
LINC01116-201ENST00000295549 PTCD1O75127 700 aaKnown RBP29.45■■■□□ 2.31
LINC01116-201ENST00000295549 LAS1LQ9Y4W2 734 aaKnown RBP29.45■■■□□ 2.31
LINC01116-201ENST00000295549 RBM42Q9BTD8 480 aaKnown RBP29.45■■■□□ 2.3
LINC01116-201ENST00000295549 ZNF496Q96IT1 587 aaPredicted RBP29.44■■■□□ 2.3
LINC01116-201ENST00000295549 FMNL2Q96PY5 1086 aa29.44■■■□□ 2.3
LINC01116-201ENST00000295549 CCNL1Q9UK58 526 aaPredicted RBP29.44■■■□□ 2.3
LINC01116-201ENST00000295549 KCPQ6ZWJ8 1503 aa29.43■■■□□ 2.3
LINC01116-201ENST00000295549 VSIG10Q8N0Z9 540 aa29.43■■■□□ 2.3
LINC01116-201ENST00000295549 SLC4A9Q96Q91 983 aa29.43■■■□□ 2.3
LINC01116-201ENST00000295549 MBIPQ9NS73 344 aa29.42■■■□□ 2.3
LINC01116-201ENST00000295549 LRRC4BQ9NT99 713 aa29.42■■■□□ 2.3
LINC01116-201ENST00000295549 HMGB2P26583 209 aaKnown RBP29.41■■■□□ 2.3
LINC01116-201ENST00000295549 EIF4A1P60842 406 aaKnown RBP29.41■■■□□ 2.3
LINC01116-201ENST00000295549 LY75O60449 1722 aa29.41■■■□□ 2.3
LINC01116-201ENST00000295549 ATP6V1AP38606 617 aa29.4■■■□□ 2.3
LINC01116-201ENST00000295549 GOLGA2Q08379 1002 aa29.4■■■□□ 2.3
LINC01116-201ENST00000295549 HEG1Q9ULI3 1381 aa29.39■■■□□ 2.29
LINC01116-201ENST00000295549 KDM3BQ7LBC6 1761 aa29.38■■■□□ 2.29
LINC01116-201ENST00000295549 UBR2Q8IWV8 1755 aa29.38■■■□□ 2.29
LINC01116-201ENST00000295549 SPINK5Q9NQ38 1064 aaPredicted RBP29.38■■■□□ 2.29
LINC01116-201ENST00000295549 ZBED9Q6R2W3 1325 aa29.37■■■□□ 2.29
LINC01116-201ENST00000295549 KCNQ4P56696 695 aa29.37■■■□□ 2.29
LINC01116-201ENST00000295549 SNRPA1P09661 255 aaKnown RBP29.36■■■□□ 2.29
LINC01116-201ENST00000295549 ITPK1Q13572 414 aa29.36■■■□□ 2.29
LINC01116-201ENST00000295549 MYH16Q9H6N6 1097 aa29.36■■■□□ 2.29
LINC01116-201ENST00000295549 ZNF831Q5JPB2 1677 aa29.35■■■□□ 2.29
LINC01116-201ENST00000295549 E9PSI1 815 aa29.35■■■□□ 2.29
LINC01116-201ENST00000295549 TEX13AQ9BXU3 409 aaPredicted RBP29.35■■■□□ 2.29
LINC01116-201ENST00000295549 GIGYF1O75420 1035 aaPredicted RBP29.34■■■□□ 2.29
LINC01116-201ENST00000295549 TSR2Q969E8 191 aaKnown RBP29.34■■■□□ 2.29
LINC01116-201ENST00000295549 SLFN5Q08AF3 891 aa29.33■■■□□ 2.29
LINC01116-201ENST00000295549 FANCIQ9NVI1 1328 aa29.32■■■□□ 2.28
LINC01116-201ENST00000295549 DNAJC10Q8IXB1 793 aa29.32■■■□□ 2.28
LINC01116-201ENST00000295549 RREB1Q92766 1687 aa29.31■■■□□ 2.28
LINC01116-201ENST00000295549 LINC00116Q8NCU8 138 aa29.31■■■□□ 2.28
LINC01116-201ENST00000295549 CDCA7LQ96GN5 454 aa29.3■■■□□ 2.28
LINC01116-201ENST00000295549 CICQ96RK0 1608 aaPredicted RBP29.3■■■□□ 2.28
LINC01116-201ENST00000295549 STARD3NLO95772 234 aa29.29■■■□□ 2.28
LINC01116-201ENST00000295549 TRMT2AQ8IZ69 625 aaKnown RBP29.29■■■□□ 2.28
LINC01116-201ENST00000295549 PRAMEF22A3QJZ6 481 aa29.28■■■□□ 2.28
LINC01116-201ENST00000295549 CYP19A1P11511 503 aaPredicted RBP29.28■■■□□ 2.28
LINC01116-201ENST00000295549 HOXB7P09629 217 aa29.28■■■□□ 2.28
LINC01116-201ENST00000295549 KRT24Q2M2I5 525 aa29.28■■■□□ 2.28
LINC01116-201ENST00000295549 RC3H1Q5TC82 1133 aaKnown RBP29.28■■■□□ 2.28
LINC01116-201ENST00000295549 USP16Q9Y5T5 823 aa29.28■■■□□ 2.28
LINC01116-201ENST00000295549 SOS1Q07889 1333 aaPredicted RBP29.26■■■□□ 2.27
LINC01116-201ENST00000295549 CNTNAP4Q9C0A0 1308 aa29.26■■■□□ 2.27
LINC01116-201ENST00000295549 TJP1Q07157 1748 aa29.25■■■□□ 2.27
LINC01116-201ENST00000295549 NBPF14Q5TI25 921 aa29.25■■■□□ 2.27
LINC01116-201ENST00000295549 DUSP27Q5VZP5 1158 aa29.25■■■□□ 2.27
LINC01116-201ENST00000295549 C8orf58Q8NAV2 365 aa29.25■■■□□ 2.27
LINC01116-201ENST00000295549 AKT1S1Q96B36 256 aa29.25■■■□□ 2.27
LINC01116-201ENST00000295549 CRKLP46109 303 aaKnown RBP29.24■■■□□ 2.27
LINC01116-201ENST00000295549 C5P01031 1676 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms