RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 PLSCR2Q9NRY7 297 aa10.01□□□□□ -0.81
PRKCA-201ENST00000284384 KCNG1Q9UIX4 513 aa10.01□□□□□ -0.81
PRKCA-201ENST00000284384 FRAT2O75474 233 aaPredicted RBP10.01□□□□□ -0.81
PRKCA-201ENST00000284384 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
PRKCA-201ENST00000284384 COG3Q96JB2 828 aa10.01□□□□□ -0.81
PRKCA-201ENST00000284384 RGPD8O14715 1765 aaPredicted RBP10.01□□□□□ -0.81
PRKCA-201ENST00000284384 LRRC37A3O60309 1634 aa10□□□□□ -0.81
PRKCA-201ENST00000284384 CARNS1A5YM72 827 aa10□□□□□ -0.81
PRKCA-201ENST00000284384 FOSBP53539 338 aa10□□□□□ -0.81
PRKCA-201ENST00000284384 NAP1L2Q9ULW6 460 aaPredicted RBP10□□□□□ -0.81
PRKCA-201ENST00000284384 NPHP4O75161 1426 aaPredicted RBP10□□□□□ -0.81
PRKCA-201ENST00000284384 STK25O00506 426 aa10□□□□□ -0.81
PRKCA-201ENST00000284384 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
PRKCA-201ENST00000284384 U2SURPO15042 1029 aaKnown RBP10□□□□□ -0.81
PRKCA-201ENST00000284384 FAM161AQ3B820 660 aa10□□□□□ -0.81
PRKCA-201ENST00000284384 ZKSCAN2Q63HK3 967 aa10□□□□□ -0.81
PRKCA-201ENST00000284384 APBB1IPQ7Z5R6 666 aaPredicted RBP10□□□□□ -0.81
PRKCA-201ENST00000284384 TTC21BQ7Z4L5 1316 aa10□□□□□ -0.81
PRKCA-201ENST00000284384 RAB11FIP3O75154 756 aa9.99□□□□□ -0.81
PRKCA-201ENST00000284384 IL13P35225 146 aa9.99□□□□□ -0.81
PRKCA-201ENST00000284384 KCNA1Q09470 495 aa9.99□□□□□ -0.81
PRKCA-201ENST00000284384 NFE2L2Q16236 605 aa9.99□□□□□ -0.81
PRKCA-201ENST00000284384 GIMAP6Q6P9H5 292 aa9.99□□□□□ -0.81
PRKCA-201ENST00000284384 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
PRKCA-201ENST00000284384 N4BP2Q86UW6 1770 aaPredicted RBP9.99□□□□□ -0.81
PRKCA-201ENST00000284384 PRR36Q9H6K5 1346 aa9.99□□□□□ -0.81
PRKCA-201ENST00000284384 TXNDC2Q86VQ3 553 aa9.99□□□□□ -0.81
PRKCA-201ENST00000284384 CHMP4BQ9H444 224 aaKnown RBP9.99□□□□□ -0.81
PRKCA-201ENST00000284384 RRP7AQ9Y3A4 280 aaKnown RBP9.99□□□□□ -0.81
PRKCA-201ENST00000284384 MVPQ14764 893 aaKnown RBP9.98□□□□□ -0.81
PRKCA-201ENST00000284384 IFT57Q9NWB7 429 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 IVNS1ABPQ9Y6Y0 642 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 NWD1Q149M9 1564 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 ARHGEF10O15013 1369 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 ANKLE2Q86XL3 938 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 SREK1Q8WXA9 508 aaKnown RBP9.98□□□□□ -0.81
PRKCA-201ENST00000284384 CACNA1FO60840 1977 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 IPO8O15397 1037 aaKnown RBP9.98□□□□□ -0.81
PRKCA-201ENST00000284384 RIPK4P57078 832 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 SND1Q7KZF4 910 aaKnown RBP eCLIP9.98□□□□□ -0.81
PRKCA-201ENST00000284384 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
PRKCA-201ENST00000284384 LTKP29376 864 aa9.97□□□□□ -0.81
PRKCA-201ENST00000284384 ARHGAP45Q92619 1136 aa9.97□□□□□ -0.81
PRKCA-201ENST00000284384 DDX19BQ9UMR2 479 aa9.97□□□□□ -0.81
PRKCA-201ENST00000284384 RBM47A0AV96 593 aaKnown RBP9.97□□□□□ -0.81
PRKCA-201ENST00000284384 PATL2C9JE40 543 aaKnown RBP9.97□□□□□ -0.81
PRKCA-201ENST00000284384 DZIP1LQ8IYY4 767 aaKnown RBP9.97□□□□□ -0.81
PRKCA-201ENST00000284384 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.81
PRKCA-201ENST00000284384 SOCS7O14512 581 aa9.96□□□□□ -0.81
PRKCA-201ENST00000284384 PRKAR2BP31323 418 aa9.96□□□□□ -0.81
PRKCA-201ENST00000284384 GNAI1P63096 354 aa9.96□□□□□ -0.81
PRKCA-201ENST00000284384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.96□□□□□ -0.813e-7■■■■□ 24.6
PRKCA-201ENST00000284384 RWDD1Q9H446 243 aaPredicted RBP9.96□□□□□ -0.81
PRKCA-201ENST00000284384 ZNF853P0CG23 659 aa9.96□□□□□ -0.82
PRKCA-201ENST00000284384 PEX14O75381 377 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 HDAC1Q13547 482 aaPredicted RBP9.95□□□□□ -0.82
PRKCA-201ENST00000284384 C8orf34Q49A92 452 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 ATF7IPQ6VMQ6 1270 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 NME9Q86XW9 330 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 SBNO1A3KN83 1393 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 RTL1A6NKG5 1358 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 STRCP1A6NGW2 1772 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 TOM1O60784 492 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 FTSJ3Q8IY81 847 aaKnown RBP9.95□□□□□ -0.82
PRKCA-201ENST00000284384 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
PRKCA-201ENST00000284384 KDRP35968 1356 aa9.94□□□□□ -0.82
PRKCA-201ENST00000284384 HSP90AA2PQ14568 343 aaPredicted RBP9.94□□□□□ -0.82
PRKCA-201ENST00000284384 L1TD1Q5T7N2 865 aaKnown RBP9.94□□□□□ -0.82
PRKCA-201ENST00000284384 PANK1Q8TE04 598 aa9.94□□□□□ -0.82
PRKCA-201ENST00000284384 RRAGDQ9NQL2 400 aaPredicted RBP9.94□□□□□ -0.82
PRKCA-201ENST00000284384 SMC4Q9NTJ3 1288 aa9.94□□□□□ -0.82
PRKCA-201ENST00000284384 LTN1O94822 1766 aa9.94□□□□□ -0.82
PRKCA-201ENST00000284384 ACEP12821 1306 aa9.94□□□□□ -0.82
PRKCA-201ENST00000284384 KIF1AQ12756 1690 aa9.94□□□□□ -0.82
PRKCA-201ENST00000284384 FLT4P35916 1363 aa9.94□□□□□ -0.82
PRKCA-201ENST00000284384 EXOSC9Q06265 439 aaKnown RBP9.94□□□□□ -0.82
PRKCA-201ENST00000284384 XIRP1Q702N8 1843 aaKnown RBP9.94□□□□□ -0.82
PRKCA-201ENST00000284384 KIAA0232Q92628 1395 aa9.94□□□□□ -0.82
PRKCA-201ENST00000284384 MED1Q15648 1581 aaPredicted RBP9.94□□□□□ -0.82
PRKCA-201ENST00000284384 NCOA3Q9Y6Q9 1424 aa9.93□□□□□ -0.82
PRKCA-201ENST00000284384 EVI5LQ96CN4 794 aa9.93□□□□□ -0.82
PRKCA-201ENST00000284384 ZNF219Q9P2Y4 722 aaPredicted RBP9.93□□□□□ -0.82
PRKCA-201ENST00000284384 EMILIN1Q9Y6C2 1016 aa9.93□□□□□ -0.82
PRKCA-201ENST00000284384 PTMAP06454 111 aaKnown RBP9.92□□□□□ -0.82
PRKCA-201ENST00000284384 HSP90AA1P07900 732 aaKnown RBP9.92□□□□□ -0.82
PRKCA-201ENST00000284384 RLBP1P12271 317 aa9.92□□□□□ -0.82
PRKCA-201ENST00000284384 SSH1Q8WYL5 1049 aa9.92□□□□□ -0.82
PRKCA-201ENST00000284384 FAM208AQ9UK61 1670 aaKnown RBP9.92□□□□□ -0.82
PRKCA-201ENST00000284384 IGHDP01880 384 aa9.92□□□□□ -0.82
PRKCA-201ENST00000284384 TRIM27P14373 513 aa9.92□□□□□ -0.82
PRKCA-201ENST00000284384 NME8Q8N427 588 aa9.92□□□□□ -0.82
PRKCA-201ENST00000284384 TSR2Q969E8 191 aaKnown RBP9.92□□□□□ -0.82
PRKCA-201ENST00000284384 CAMTA1Q9Y6Y1 1673 aa9.92□□□□□ -0.82
PRKCA-201ENST00000284384 ZNF335Q9H4Z2 1342 aaPredicted RBP9.92□□□□□ -0.82
PRKCA-201ENST00000284384 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
PRKCA-201ENST00000284384 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
PRKCA-201ENST00000284384 SOS1Q07889 1333 aaPredicted RBP9.91□□□□□ -0.82
PRKCA-201ENST00000284384 ADGRL3Q9HAR2 1447 aa9.9□□□□□ -0.82
PRKCA-201ENST00000284384 ABCC4O15439 1325 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms