RNA–Protein interactions for RNA: ENST00000284110.1

HS3ST3A1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST3A1, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-201ENST00000284110 NCAPGQ9BPX3 1015 aa23.68■■□□□ 1.38
HS3ST3A1-201ENST00000284110 MORC2Q9Y6X9 1032 aaPredicted RBP23.68■■□□□ 1.38
HS3ST3A1-201ENST00000284110 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
HS3ST3A1-201ENST00000284110 EXOSC9Q06265 439 aaKnown RBP23.68■■□□□ 1.38
HS3ST3A1-201ENST00000284110 PNPLA6Q8IY17 1366 aa23.67■■□□□ 1.38
HS3ST3A1-201ENST00000284110 ERICH4A6NGS2 130 aa23.67■■□□□ 1.38
HS3ST3A1-201ENST00000284110 PRKAR2BP31323 418 aa23.67■■□□□ 1.38
HS3ST3A1-201ENST00000284110 GTF2A1P52655 376 aaPredicted RBP23.67■■□□□ 1.38
HS3ST3A1-201ENST00000284110 PDE3AQ14432 1141 aa23.67■■□□□ 1.38
HS3ST3A1-201ENST00000284110 RSPH14Q9UHP6 348 aa23.67■■□□□ 1.38
HS3ST3A1-201ENST00000284110 KIF20BQ96Q89 1820 aa23.67■■□□□ 1.38
HS3ST3A1-201ENST00000284110 UBR1Q8IWV7 1749 aa23.66■■□□□ 1.38
HS3ST3A1-201ENST00000284110 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
HS3ST3A1-201ENST00000284110 ATP7BP35670 1465 aa23.66■■□□□ 1.38
HS3ST3A1-201ENST00000284110 CPSF1Q10570 1443 aaKnown RBP23.66■■□□□ 1.38
HS3ST3A1-201ENST00000284110 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
HS3ST3A1-201ENST00000284110 SMC4Q9NTJ3 1288 aa23.65■■□□□ 1.38
HS3ST3A1-201ENST00000284110 ADAMTS13Q76LX8 1427 aa23.65■■□□□ 1.38
HS3ST3A1-201ENST00000284110 ADGRB2O60241 1585 aa23.65■■□□□ 1.38
HS3ST3A1-201ENST00000284110 DHX16O60231 1041 aaKnown RBP23.65■■□□□ 1.38
HS3ST3A1-201ENST00000284110 MAP2P11137 1827 aaKnown RBP23.65■■□□□ 1.38
HS3ST3A1-201ENST00000284110 CPS1P31327 1500 aa23.64■■□□□ 1.37
HS3ST3A1-201ENST00000284110 CAVIN1Q6NZI2 390 aaKnown RBP23.64■■□□□ 1.37
HS3ST3A1-201ENST00000284110 FAM43BQ6ZT52 329 aaPredicted RBP23.64■■□□□ 1.37
HS3ST3A1-201ENST00000284110 THUMPD2Q9BTF0 503 aaKnown RBP23.64■■□□□ 1.37
HS3ST3A1-201ENST00000284110 SPTLC3Q9NUV7 552 aa23.64■■□□□ 1.37
HS3ST3A1-201ENST00000284110 RAD51AP2Q09MP3 1159 aa23.63■■□□□ 1.37
HS3ST3A1-201ENST00000284110 SNX21Q969T3 373 aa23.63■■□□□ 1.37
HS3ST3A1-201ENST00000284110 CEP83Q9Y592 693 aa23.63■■□□□ 1.37
HS3ST3A1-201ENST00000284110 CEP120Q8N960 986 aa23.62■■□□□ 1.37
HS3ST3A1-201ENST00000284110 RIOK3O14730 519 aaKnown RBP23.62■■□□□ 1.37
HS3ST3A1-201ENST00000284110 EDC4Q6P2E9 1401 aaKnown RBP23.61■■□□□ 1.37
HS3ST3A1-201ENST00000284110 COG3Q96JB2 828 aa23.61■■□□□ 1.37
HS3ST3A1-201ENST00000284110 FAM135BQ49AJ0 1406 aa23.6■■□□□ 1.37
HS3ST3A1-201ENST00000284110 FCHSD2O94868 740 aa23.6■■□□□ 1.37
HS3ST3A1-201ENST00000284110 HNRNPH2P55795 449 aaKnown RBP23.6■■□□□ 1.37
HS3ST3A1-201ENST00000284110 ICE2Q659A1 982 aa23.6■■□□□ 1.37
HS3ST3A1-201ENST00000284110 BAG4O95429 457 aaKnown RBP23.59■■□□□ 1.37
HS3ST3A1-201ENST00000284110 CTR9Q6PD62 1173 aa23.59■■□□□ 1.37
HS3ST3A1-201ENST00000284110 CREBRFQ8IUR6 639 aa23.59■■□□□ 1.37
HS3ST3A1-201ENST00000284110 DIAPH3Q9NSV4 1193 aa23.59■■□□□ 1.37
HS3ST3A1-201ENST00000284110 SSFA2P28290 1259 aa23.59■■□□□ 1.37
HS3ST3A1-201ENST00000284110 NCBP1Q09161 790 aaKnown RBP23.59■■□□□ 1.37
HS3ST3A1-201ENST00000284110 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
HS3ST3A1-201ENST00000284110 TECPR2O15040 1411 aa23.58■■□□□ 1.37
HS3ST3A1-201ENST00000284110 SSH1Q8WYL5 1049 aa23.58■■□□□ 1.37
HS3ST3A1-201ENST00000284110 CCDC172P0C7W6 258 aa23.58■■□□□ 1.36
HS3ST3A1-201ENST00000284110 LRRC7Q96NW7 1537 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 MCCP23508 829 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 IL13P35225 146 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 AMOTL2Q9Y2J4 779 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 PTPRUQ92729 1446 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 KRT222Q8N1A0 295 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 PMFBP1Q8TBY8 1022 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 EID1Q9Y6B2 187 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 ACEP12821 1306 aa23.57■■□□□ 1.36
HS3ST3A1-201ENST00000284110 RASSF4Q9H2L5 321 aa23.56■■□□□ 1.36
HS3ST3A1-201ENST00000284110 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.55■■□□□ 1.36
HS3ST3A1-201ENST00000284110 SYCP1Q15431 976 aa23.55■■□□□ 1.36
HS3ST3A1-201ENST00000284110 TMX1Q9H3N1 280 aa23.55■■□□□ 1.36
HS3ST3A1-201ENST00000284110 TICAM2Q86XR7 235 aa23.55■■□□□ 1.36
HS3ST3A1-201ENST00000284110 C17orf53Q8N3J3 647 aaPredicted RBP23.55■■□□□ 1.36
HS3ST3A1-201ENST00000284110 KIF18AQ8NI77 898 aa23.55■■□□□ 1.36
HS3ST3A1-201ENST00000284110 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
HS3ST3A1-201ENST00000284110 GUCY2CP25092 1073 aa23.54■■□□□ 1.36
HS3ST3A1-201ENST00000284110 BRMS1Q9HCU9 246 aa23.54■■□□□ 1.36
HS3ST3A1-201ENST00000284110 LRSAM1Q6UWE0 723 aa23.54■■□□□ 1.36
HS3ST3A1-201ENST00000284110 SATB1Q01826 763 aa23.53■■□□□ 1.36
HS3ST3A1-201ENST00000284110 CDC42BPGQ6DT37 1551 aa23.53■■□□□ 1.36
HS3ST3A1-201ENST00000284110 CYP2C19P33261 490 aa23.52■■□□□ 1.36
HS3ST3A1-201ENST00000284110 ZKSCAN2Q63HK3 967 aa23.52■■□□□ 1.36
HS3ST3A1-201ENST00000284110 FAM83GA6ND36 823 aa23.52■■□□□ 1.35
HS3ST3A1-201ENST00000284110 ELL2O00472 640 aaPredicted RBP23.52■■□□□ 1.35
HS3ST3A1-201ENST00000284110 KNDC1Q76NI1 1749 aa23.51■■□□□ 1.35
HS3ST3A1-201ENST00000284110 TRIM27P14373 513 aa23.51■■□□□ 1.35
HS3ST3A1-201ENST00000284110 NBPF20Q3BBV1 942 aa23.51■■□□□ 1.35
HS3ST3A1-201ENST00000284110 LMBRD1Q9NUN5 540 aa23.51■■□□□ 1.35
HS3ST3A1-201ENST00000284110 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
HS3ST3A1-201ENST00000284110 FAM53CQ9NYF3 392 aa23.51■■□□□ 1.35
HS3ST3A1-201ENST00000284110 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
HS3ST3A1-201ENST00000284110 CHAF1AQ13111 956 aaPredicted RBP23.5■■□□□ 1.35
HS3ST3A1-201ENST00000284110 DCTN1Q14203 1278 aa23.5■■□□□ 1.35
HS3ST3A1-201ENST00000284110 DZIP1LQ8IYY4 767 aaKnown RBP23.5■■□□□ 1.35
HS3ST3A1-201ENST00000284110 C3P01024 1663 aa23.5■■□□□ 1.35
HS3ST3A1-201ENST00000284110 NFE2L2Q16236 605 aa23.49■■□□□ 1.35
HS3ST3A1-201ENST00000284110 HSP90AB3PQ58FF7 597 aa23.49■■□□□ 1.35
HS3ST3A1-201ENST00000284110 MVPQ14764 893 aaKnown RBP23.48■■□□□ 1.35
HS3ST3A1-201ENST00000284110 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.48■■□□□ 1.35
HS3ST3A1-201ENST00000284110 IRF6O14896 467 aa23.48■■□□□ 1.35
HS3ST3A1-201ENST00000284110 PDZRN3Q9UPQ7 1066 aa23.48■■□□□ 1.35
HS3ST3A1-201ENST00000284110 RAD50Q92878 1312 aa23.47■■□□□ 1.35
HS3ST3A1-201ENST00000284110 TSPYL6Q8N831 410 aa23.47■■□□□ 1.35
HS3ST3A1-201ENST00000284110 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
HS3ST3A1-201ENST00000284110 MON2Q7Z3U7 1717 aa23.46■■□□□ 1.35
HS3ST3A1-201ENST00000284110 IL16Q14005 1332 aa23.46■■□□□ 1.35
HS3ST3A1-201ENST00000284110 HSP90AB2PQ58FF8 381 aa23.46■■□□□ 1.35
HS3ST3A1-201ENST00000284110 ITPRIPQ8IWB1 547 aa23.46■■□□□ 1.35
HS3ST3A1-201ENST00000284110 RBM27Q9P2N5 1060 aaKnown RBP23.46■■□□□ 1.35
HS3ST3A1-201ENST00000284110 KIF16BQ96L93 1317 aa23.45■■□□□ 1.35
HS3ST3A1-201ENST00000284110 AATKQ6ZMQ8 1374 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms