RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.35
TMEM47-201ENST00000275954 CDC42BPBQ9Y5S2 1711 aa17.27■□□□□ 0.35
TMEM47-201ENST00000275954 BICD2Q8TD16 824 aa17.26■□□□□ 0.35
TMEM47-201ENST00000275954 HECW2Q9P2P5 1572 aa17.26■□□□□ 0.35
TMEM47-201ENST00000275954 SMC5Q8IY18 1101 aa17.26■□□□□ 0.35
TMEM47-201ENST00000275954 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
TMEM47-201ENST00000275954 GPTP24298 496 aa17.26■□□□□ 0.35
TMEM47-201ENST00000275954 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
TMEM47-201ENST00000275954 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
TMEM47-201ENST00000275954 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
TMEM47-201ENST00000275954 IL13P35225 146 aa17.25■□□□□ 0.35
TMEM47-201ENST00000275954 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
TMEM47-201ENST00000275954 ZBTB3Q9H5J0 574 aa17.25■□□□□ 0.35
TMEM47-201ENST00000275954 SETD1BQ9UPS6 1966 aaKnown RBP17.25■□□□□ 0.35
TMEM47-201ENST00000275954 SDSP20132 328 aa17.25■□□□□ 0.35
TMEM47-201ENST00000275954 G2E3Q7L622 706 aa17.25■□□□□ 0.35
TMEM47-201ENST00000275954 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
TMEM47-201ENST00000275954 NFATC2IPQ8NCF5 419 aa17.24■□□□□ 0.35
TMEM47-201ENST00000275954 GOLGA6L6A8MZA4 724 aa17.24■□□□□ 0.35
TMEM47-201ENST00000275954 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
TMEM47-201ENST00000275954 CCDC8Q9H0W5 538 aaPredicted RBP17.24■□□□□ 0.35
TMEM47-201ENST00000275954 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
TMEM47-201ENST00000275954 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
TMEM47-201ENST00000275954 KCNQ4P56696 695 aa17.24■□□□□ 0.35
TMEM47-201ENST00000275954 OTUD7AQ8TE49 926 aaPredicted RBP17.24■□□□□ 0.35
TMEM47-201ENST00000275954 ZBTB7BO15156 539 aaPredicted RBP17.23■□□□□ 0.35
TMEM47-201ENST00000275954 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
TMEM47-201ENST00000275954 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
TMEM47-201ENST00000275954 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
TMEM47-201ENST00000275954 ATP5J2-PTCD1G3V325 749 aa17.22■□□□□ 0.35
TMEM47-201ENST00000275954 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
TMEM47-201ENST00000275954 PTPRCP08575 1304 aa17.22■□□□□ 0.35
TMEM47-201ENST00000275954 CPLX1O14810 134 aa17.22■□□□□ 0.35
TMEM47-201ENST00000275954 NRDCO43847 1150 aa17.22■□□□□ 0.35
TMEM47-201ENST00000275954 CEBPZQ03701 1054 aaKnown RBP17.22■□□□□ 0.35
TMEM47-201ENST00000275954 KIF1BPQ96EK5 621 aa17.22■□□□□ 0.35
TMEM47-201ENST00000275954 JAKMIP1Q96N16 626 aaKnown RBP17.22■□□□□ 0.35
TMEM47-201ENST00000275954 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
TMEM47-201ENST00000275954 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
TMEM47-201ENST00000275954 MCM2P49736 904 aa17.21■□□□□ 0.35
TMEM47-201ENST00000275954 NBPF6Q5VWK0 638 aa17.21■□□□□ 0.35
TMEM47-201ENST00000275954 NBPF4Q96M43 638 aa17.21■□□□□ 0.35
TMEM47-201ENST00000275954 CIZ1Q9ULV3 898 aaPredicted RBP17.21■□□□□ 0.35
TMEM47-201ENST00000275954 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
TMEM47-201ENST00000275954 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.35
TMEM47-201ENST00000275954 TRMT2AQ8IZ69 625 aaKnown RBP17.21■□□□□ 0.34
TMEM47-201ENST00000275954 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
TMEM47-201ENST00000275954 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
TMEM47-201ENST00000275954 HOXC9P31274 260 aa17.2■□□□□ 0.34
TMEM47-201ENST00000275954 GDPD2Q9HCC8 539 aa17.2■□□□□ 0.34
TMEM47-201ENST00000275954 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
TMEM47-201ENST00000275954 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
TMEM47-201ENST00000275954 FAM43AQ8N2R8 423 aa17.19■□□□□ 0.34
TMEM47-201ENST00000275954 CYP46A1Q9Y6A2 500 aa17.19■□□□□ 0.34
TMEM47-201ENST00000275954 BECN2A8MW95 431 aa17.19■□□□□ 0.34
TMEM47-201ENST00000275954 DDB1Q16531 1140 aa17.19■□□□□ 0.34
TMEM47-201ENST00000275954 CREBRFQ8IUR6 639 aa17.19■□□□□ 0.34
TMEM47-201ENST00000275954 MYD88Q99836 296 aa17.19■□□□□ 0.34
TMEM47-201ENST00000275954 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
TMEM47-201ENST00000275954 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
TMEM47-201ENST00000275954 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
TMEM47-201ENST00000275954 LGR6Q9HBX8 967 aa17.18■□□□□ 0.34
TMEM47-201ENST00000275954 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
TMEM47-201ENST00000275954 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
TMEM47-201ENST00000275954 PRPF40BQ6NWY9 871 aaKnown RBP17.18■□□□□ 0.34
TMEM47-201ENST00000275954 DBF4Q9UBU7 674 aaPredicted RBP17.18■□□□□ 0.34
TMEM47-201ENST00000275954 ABCC3O15438 1527 aa17.18■□□□□ 0.34
TMEM47-201ENST00000275954 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
TMEM47-201ENST00000275954 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
TMEM47-201ENST00000275954 PDE1AP54750 535 aa17.17■□□□□ 0.34
TMEM47-201ENST00000275954 ZCRB1Q8TBF4 217 aaKnown RBP17.17■□□□□ 0.34
TMEM47-201ENST00000275954 EFCAB6Q5THR3 1501 aa17.17■□□□□ 0.34
TMEM47-201ENST00000275954 BCL11BQ9C0K0 894 aaPredicted RBP17.17■□□□□ 0.34
TMEM47-201ENST00000275954 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
TMEM47-201ENST00000275954 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM47-201ENST00000275954 PSMA5P28066 241 aa17.16■□□□□ 0.34
TMEM47-201ENST00000275954 TRDNQ13061 729 aa17.16■□□□□ 0.34
TMEM47-201ENST00000275954 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
TMEM47-201ENST00000275954 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
TMEM47-201ENST00000275954 GOLGA6L19H0YKK7 550 aa17.16■□□□□ 0.34
TMEM47-201ENST00000275954 CCDC24Q8N4L8 307 aa17.16■□□□□ 0.34
TMEM47-201ENST00000275954 PLEKHM2Q8IWE5 1019 aa17.16■□□□□ 0.34
TMEM47-201ENST00000275954 GLRX3O76003 335 aaKnown RBP17.16■□□□□ 0.34
TMEM47-201ENST00000275954 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
TMEM47-201ENST00000275954 MBD3O95983 291 aa17.15■□□□□ 0.34
TMEM47-201ENST00000275954 RALYLQ86SE5 291 aaKnown RBP17.15■□□□□ 0.34
TMEM47-201ENST00000275954 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
TMEM47-201ENST00000275954 CCDC83Q8IWF9 413 aa17.15■□□□□ 0.34
TMEM47-201ENST00000275954 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
TMEM47-201ENST00000275954 CHMP4CQ96CF2 233 aa17.15■□□□□ 0.34
TMEM47-201ENST00000275954 SYCE3A1L190 88 aa17.14■□□□□ 0.33
TMEM47-201ENST00000275954 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
TMEM47-201ENST00000275954 LARP1BQ659C4 914 aaKnown RBP17.14■□□□□ 0.33
TMEM47-201ENST00000275954 BLOC1S2Q6QNY1 142 aa17.14■□□□□ 0.33
TMEM47-201ENST00000275954 LRRFIP1Q32MZ4 808 aaKnown RBP17.14■□□□□ 0.33
TMEM47-201ENST00000275954 PDRG1Q9NUG6 133 aa17.14■□□□□ 0.33
TMEM47-201ENST00000275954 NFXL1Q6ZNB6 911 aa17.14■□□□□ 0.33
TMEM47-201ENST00000275954 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
TMEM47-201ENST00000275954 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
TMEM47-201ENST00000275954 TTC21AQ8NDW8 1320 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms