RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 TMEM131LA2VDJ0 1609 aa22.66■■□□□ 1.22
SSC4D-201ENST00000275560 CDK12Q9NYV4 1490 aaPredicted RBP22.66■■□□□ 1.22
SSC4D-201ENST00000275560 CPS1P31327 1500 aa22.64■■□□□ 1.21
SSC4D-201ENST00000275560 EIF4A2Q14240 407 aaKnown RBP22.64■■□□□ 1.21
SSC4D-201ENST00000275560 FOXO3O43524 673 aa22.63■■□□□ 1.21
SSC4D-201ENST00000275560 HMMRO75330 724 aa22.63■■□□□ 1.21
SSC4D-201ENST00000275560 NECTIN2Q92692 538 aa22.63■■□□□ 1.21
SSC4D-201ENST00000275560 PNMA6EA0A0J9YXQ4 647 aa22.63■■□□□ 1.21
SSC4D-201ENST00000275560 MAP4K4O95819 1239 aaPredicted RBP22.63■■□□□ 1.21
SSC4D-201ENST00000275560 CHMLP26374 656 aa22.63■■□□□ 1.21
SSC4D-201ENST00000275560 OSBPL3Q9H4L5 887 aa22.63■■□□□ 1.21
SSC4D-201ENST00000275560 ATP7BP35670 1465 aa22.63■■□□□ 1.21
SSC4D-201ENST00000275560 CPSF1Q10570 1443 aaKnown RBP22.63■■□□□ 1.21
SSC4D-201ENST00000275560 NPM1P06748 294 aaKnown RBP eCLIP22.63■■□□□ 1.21
SSC4D-201ENST00000275560 HCLS1P14317 486 aaPredicted RBP22.62■■□□□ 1.21
SSC4D-201ENST00000275560 PLCB2Q00722 1185 aa22.62■■□□□ 1.21
SSC4D-201ENST00000275560 CNPY2Q9Y2B0 182 aa22.62■■□□□ 1.21
SSC4D-201ENST00000275560 PTPRCP08575 1304 aa22.61■■□□□ 1.21
SSC4D-201ENST00000275560 MX1P20591 662 aa22.61■■□□□ 1.21
SSC4D-201ENST00000275560 SRCIN1Q9C0H9 1055 aa22.61■■□□□ 1.21
SSC4D-201ENST00000275560 EDC4Q6P2E9 1401 aaKnown RBP22.61■■□□□ 1.21
SSC4D-201ENST00000275560 SYAP1Q96A49 352 aaPredicted RBP22.6■■□□□ 1.21
SSC4D-201ENST00000275560 ADCY5O95622 1261 aa22.6■■□□□ 1.21
SSC4D-201ENST00000275560 MCCP23508 829 aa22.6■■□□□ 1.21
SSC4D-201ENST00000275560 TXNDC2Q86VQ3 553 aa22.6■■□□□ 1.21
SSC4D-201ENST00000275560 ZNF710Q8N1W2 664 aa22.6■■□□□ 1.21
SSC4D-201ENST00000275560 ZHX1Q9UKY1 873 aaPredicted RBP22.6■■□□□ 1.21
SSC4D-201ENST00000275560 SALL3Q9BXA9 1300 aa22.59■■□□□ 1.21
SSC4D-201ENST00000275560 MCM2P49736 904 aa22.59■■□□□ 1.21
SSC4D-201ENST00000275560 LRRCC1Q9C099 1032 aa22.59■■□□□ 1.21
SSC4D-201ENST00000275560 IL1RAPL2Q9NP60 686 aa22.59■■□□□ 1.21
SSC4D-201ENST00000275560 WASLO00401 505 aaPredicted RBP22.58■■□□□ 1.21
SSC4D-201ENST00000275560 NOLC1Q14978 699 aaKnown RBP eCLIP22.58■■□□□ 1.21
SSC4D-201ENST00000275560 MYRIPQ8NFW9 859 aa22.58■■□□□ 1.21
SSC4D-201ENST00000275560 NUDT16Q96DE0 195 aaKnown RBP22.58■■□□□ 1.21
SSC4D-201ENST00000275560 DIP2CQ9Y2E4 1556 aa22.58■■□□□ 1.21
SSC4D-201ENST00000275560 HSP90AB2PQ58FF8 381 aa22.58■■□□□ 1.2
SSC4D-201ENST00000275560 PREX1Q8TCU6 1659 aa22.57■■□□□ 1.2
SSC4D-201ENST00000275560 NUTM2FA1L443 756 aa22.57■■□□□ 1.2
SSC4D-201ENST00000275560 GNAI2P04899 355 aa22.57■■□□□ 1.2
SSC4D-201ENST00000275560 INTS4Q96HW7 963 aaKnown RBP22.57■■□□□ 1.2
SSC4D-201ENST00000275560 AATKQ6ZMQ8 1374 aa22.57■■□□□ 1.2
SSC4D-201ENST00000275560 PIBF1Q8WXW3 757 aa22.56■■□□□ 1.2
SSC4D-201ENST00000275560 RPAP1Q9BWH6 1393 aaPredicted RBP22.56■■□□□ 1.2
SSC4D-201ENST00000275560 NUTM1Q86Y26 1132 aa22.55■■□□□ 1.2
SSC4D-201ENST00000275560 TSPYL4Q9UJ04 414 aa22.55■■□□□ 1.2
SSC4D-201ENST00000275560 KIAA0232Q92628 1395 aa22.55■■□□□ 1.2
SSC4D-201ENST00000275560 FIBPO43427 364 aa22.54■■□□□ 1.2
SSC4D-201ENST00000275560 CPA1P15085 419 aa22.54■■□□□ 1.2
SSC4D-201ENST00000275560 WDR33Q9C0J8 1336 aaKnown RBP22.54■■□□□ 1.2
SSC4D-201ENST00000275560 CCDC94Q9BW85 323 aaPredicted RBP22.54■■□□□ 1.2
SSC4D-201ENST00000275560 PHF14O94880 888 aa22.53■■□□□ 1.2
SSC4D-201ENST00000275560 GIMAP6Q6P9H5 292 aa22.53■■□□□ 1.2
SSC4D-201ENST00000275560 AP5Z1O43299 807 aa22.53■■□□□ 1.2
SSC4D-201ENST00000275560 CBX1P83916 185 aa22.53■■□□□ 1.2
SSC4D-201ENST00000275560 MTERF4Q7Z6M4 381 aaKnown RBP22.53■■□□□ 1.2
SSC4D-201ENST00000275560 SMAP1Q8IYB5 467 aaPredicted RBP22.53■■□□□ 1.2
SSC4D-201ENST00000275560 CCT4P50991 539 aaKnown RBP22.52■■□□□ 1.2
SSC4D-201ENST00000275560 HAP1P54257 671 aaPredicted RBP22.52■■□□□ 1.2
SSC4D-201ENST00000275560 CCDC183Q5T5S1 534 aa22.52■■□□□ 1.2
SSC4D-201ENST00000275560 LRRFIP2Q9Y608 721 aaKnown RBP22.52■■□□□ 1.2
SSC4D-201ENST00000275560 ANAPC15P60006 121 aa22.52■■□□□ 1.2
SSC4D-201ENST00000275560 CRB1P82279 1406 aa22.51■■□□□ 1.19
SSC4D-201ENST00000275560 FKBP5Q13451 457 aaPredicted RBP22.51■■□□□ 1.19
SSC4D-201ENST00000275560 SPC24Q8NBT2 197 aa22.5■■□□□ 1.19
SSC4D-201ENST00000275560 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
SSC4D-201ENST00000275560 CCDC61Q9Y6R9 512 aa22.49■■□□□ 1.19
SSC4D-201ENST00000275560 MTHFSDQ2M296 383 aaKnown RBP22.49■■□□□ 1.19
SSC4D-201ENST00000275560 RASEFQ8IZ41 740 aa22.49■■□□□ 1.19
SSC4D-201ENST00000275560 PYCARDQ9ULZ3 195 aa22.49■■□□□ 1.19
SSC4D-201ENST00000275560 LARGE1O95461 756 aa22.48■■□□□ 1.19
SSC4D-201ENST00000275560 SYT1P21579 422 aa22.48■■□□□ 1.19
SSC4D-201ENST00000275560 AK2P54819 239 aa22.48■■□□□ 1.19
SSC4D-201ENST00000275560 ATP2B3Q16720 1220 aa22.48■■□□□ 1.19
SSC4D-201ENST00000275560 ZSCAN22P10073 491 aaPredicted RBP22.48■■□□□ 1.19
SSC4D-201ENST00000275560 HSPA4P34932 840 aa22.48■■□□□ 1.19
SSC4D-201ENST00000275560 FAM184AQ8NB25 1140 aa22.48■■□□□ 1.19
SSC4D-201ENST00000275560 DDX54Q8TDD1 881 aaKnown RBP22.48■■□□□ 1.19
SSC4D-201ENST00000275560 RIMS1Q86UR5 1692 aaKnown RBP22.47■■□□□ 1.19
SSC4D-201ENST00000275560 PRR36Q9H6K5 1346 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 ATP8B2P98198 1209 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 FLIIQ13045 1269 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 METP08581 1390 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 KDM4AO75164 1064 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 UVSSAQ2YD98 709 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 PPP4R3BQ5MIZ7 849 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 KCNF1Q9H3M0 494 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 SNX14Q9Y5W7 946 aa22.47■■□□□ 1.19
SSC4D-201ENST00000275560 RUFY3Q7L099 469 aa22.46■■□□□ 1.19
SSC4D-201ENST00000275560 CHMP3Q9Y3E7 222 aa22.46■■□□□ 1.19
SSC4D-201ENST00000275560 SPDYE4A6NLX3 237 aa22.46■■□□□ 1.19
SSC4D-201ENST00000275560 STX6O43752 255 aa22.46■■□□□ 1.19
SSC4D-201ENST00000275560 PRIMPOLQ96LW4 560 aa22.46■■□□□ 1.19
SSC4D-201ENST00000275560 BCL2L12Q9HB09 334 aa22.46■■□□□ 1.19
SSC4D-201ENST00000275560 SPG7Q9UQ90 795 aa22.46■■□□□ 1.19
SSC4D-201ENST00000275560 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
SSC4D-201ENST00000275560 ZSCAN20P17040 1043 aaPredicted RBP22.45■■□□□ 1.18
SSC4D-201ENST00000275560 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
SSC4D-201ENST00000275560 RIMBP3BA6NNM3 1639 aa22.45■■□□□ 1.18
SSC4D-201ENST00000275560 RIMBP3Q9UFD9 1639 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms