RNA–Protein interactions for RNA: ENST00000262919.9

ATRN-201, Transcript of attractin, humanhuman

APPRIS P4 TSL 5 BASIC

Gene ATRN, Length 8,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-201ENST00000262919 CHD1LQ86WJ1 897 aa21.47■■□□□ 1.03
ATRN-201ENST00000262919 SLF2Q8IX21 1173 aa21.47■■□□□ 1.03
ATRN-201ENST00000262919 TCP11L2Q8N4U5 519 aa21.47■■□□□ 1.03
ATRN-201ENST00000262919 KANK3Q6NY19 840 aa21.47■■□□□ 1.03
ATRN-201ENST00000262919 TSNARE1Q96NA8 513 aa21.47■■□□□ 1.03
ATRN-201ENST00000262919 DDX23Q9BUQ8 820 aaKnown RBP21.47■■□□□ 1.03
ATRN-201ENST00000262919 CCDC12Q8WUD4 166 aaPredicted RBP21.47■■□□□ 1.03
ATRN-201ENST00000262919 NUP133Q8WUM0 1156 aa21.47■■□□□ 1.03
ATRN-201ENST00000262919 GOLIM4O00461 696 aa21.47■■□□□ 1.03
ATRN-201ENST00000262919 AMPD3Q01432 767 aa21.47■■□□□ 1.03
ATRN-201ENST00000262919 MVPQ14764 893 aaKnown RBP21.46■■□□□ 1.03
ATRN-201ENST00000262919 PABPN1LA6NDY0 278 aaKnown RBP21.46■■□□□ 1.03
ATRN-201ENST00000262919 A0A087WZG4 1122 aa21.46■■□□□ 1.03
ATRN-201ENST00000262919 YEATS4O95619 227 aa21.46■■□□□ 1.03
ATRN-201ENST00000262919 LARP1Q6PKG0 1096 aaKnown RBP21.46■■□□□ 1.03
ATRN-201ENST00000262919 STMN4Q9H169 189 aaPredicted RBP21.45■■□□□ 1.02
ATRN-201ENST00000262919 TOP1P11387 765 aaKnown RBP21.45■■□□□ 1.02
ATRN-201ENST00000262919 TTC12Q9H892 705 aaPredicted RBP21.45■■□□□ 1.02
ATRN-201ENST00000262919 IKBKGQ9Y6K9 419 aa21.45■■□□□ 1.02
ATRN-201ENST00000262919 CASKIN1Q8WXD9 1431 aa21.45■■□□□ 1.02
ATRN-201ENST00000262919 LRRC27Q9C0I9 530 aa21.45■■□□□ 1.02
ATRN-201ENST00000262919 CCDC141Q6ZP82 1450 aa21.44■■□□□ 1.02
ATRN-201ENST00000262919 CEP126Q9P2H0 1117 aa21.44■■□□□ 1.02
ATRN-201ENST00000262919 SSBP05455 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
ATRN-201ENST00000262919 SF3B2Q13435 895 aaKnown RBP21.44■■□□□ 1.02
ATRN-201ENST00000262919 NOB1Q9ULX3 412 aaKnown RBP21.44■■□□□ 1.02
ATRN-201ENST00000262919 PDZRN3Q9UPQ7 1066 aa21.44■■□□□ 1.02
ATRN-201ENST00000262919 IGHMBP2P38935 993 aaKnown RBP21.44■■□□□ 1.02
ATRN-201ENST00000262919 ANKS4BQ8N8V4 417 aa21.44■■□□□ 1.02
ATRN-201ENST00000262919 AIDAQ96BJ3 306 aa21.43■■□□□ 1.02
ATRN-201ENST00000262919 CTNNA2P26232 953 aa21.43■■□□□ 1.02
ATRN-201ENST00000262919 CABP4P57796 275 aa21.43■■□□□ 1.02
ATRN-201ENST00000262919 PAXBP1Q9Y5B6 917 aa21.43■■□□□ 1.02
ATRN-201ENST00000262919 SLC4A2P04920 1241 aa21.43■■□□□ 1.02
ATRN-201ENST00000262919 RNF41Q9H4P4 317 aaPredicted RBP21.43■■□□□ 1.02
ATRN-201ENST00000262919 AACSQ86V21 672 aa21.43■■□□□ 1.02
ATRN-201ENST00000262919 USP37Q86T82 979 aa21.42■■□□□ 1.02
ATRN-201ENST00000262919 CCDC113Q9H0I3 377 aa21.42■■□□□ 1.02
ATRN-201ENST00000262919 ATAD2Q6PL18 1390 aa21.42■■□□□ 1.02
ATRN-201ENST00000262919 TUBB4AP04350 444 aa21.42■■□□□ 1.02
ATRN-201ENST00000262919 NSRP1Q9H0G5 558 aaKnown RBP21.42■■□□□ 1.02
ATRN-201ENST00000262919 IVLP07476 585 aa21.42■■□□□ 1.02
ATRN-201ENST00000262919 PRPHP41219 470 aa21.42■■□□□ 1.02
ATRN-201ENST00000262919 FKBP4Q02790 459 aaKnown RBP eCLIP21.42■■□□□ 1.02
ATRN-201ENST00000262919 CEP112Q8N8E3 955 aa21.42■■□□□ 1.02
ATRN-201ENST00000262919 HOMER2Q9NSB8 354 aa21.42■■□□□ 1.02
ATRN-201ENST00000262919 CASTP20810 708 aaKnown RBP21.41■■□□□ 1.02
ATRN-201ENST00000262919 GLRX3O76003 335 aaKnown RBP21.41■■□□□ 1.02
ATRN-201ENST00000262919 SPECC1Q5M775 1068 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 RPAP2Q8IXW5 612 aaPredicted RBP21.41■■□□□ 1.02
ATRN-201ENST00000262919 PIBF1Q8WXW3 757 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 PRKAR2BP31323 418 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 LRP2BPQ9P2M1 347 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 CUL5Q93034 780 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 MPHOSPH6Q99547 160 aaKnown RBP21.41■■□□□ 1.02
ATRN-201ENST00000262919 BACH2Q9BYV9 841 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 ACTN2P35609 894 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 CCDC178Q5BJE1 867 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 SSX2IPQ9Y2D8 614 aa21.41■■□□□ 1.02
ATRN-201ENST00000262919 MCM4P33991 863 aa21.4■■□□□ 1.02
ATRN-201ENST00000262919 CTR9Q6PD62 1173 aa21.4■■□□□ 1.02
ATRN-201ENST00000262919 NUP88Q99567 741 aaPredicted RBP21.4■■□□□ 1.02
ATRN-201ENST00000262919 RBM5P52756 815 aaKnown RBP eCLIP21.4■■□□□ 1.02
ATRN-201ENST00000262919 KIF4BQ2VIQ3 1234 aa21.4■■□□□ 1.02
ATRN-201ENST00000262919 JAKMIP1Q96N16 626 aaKnown RBP21.4■■□□□ 1.02
ATRN-201ENST00000262919 BCL11BQ9C0K0 894 aaPredicted RBP21.4■■□□□ 1.02
ATRN-201ENST00000262919 KLHL34Q8N239 644 aa21.39■■□□□ 1.02
ATRN-201ENST00000262919 GOPCQ9HD26 462 aa21.39■■□□□ 1.01
ATRN-201ENST00000262919 RBM10P98175 930 aaKnown RBP21.39■■□□□ 1.01
ATRN-201ENST00000262919 IQCA1Q86XH1 822 aa21.39■■□□□ 1.01
ATRN-201ENST00000262919 KIF1BPQ96EK5 621 aa21.39■■□□□ 1.01
ATRN-201ENST00000262919 ADAMTS8Q9UP79 889 aa21.39■■□□□ 1.01
ATRN-201ENST00000262919 NCOA2Q15596 1464 aa21.39■■□□□ 1.01
ATRN-201ENST00000262919 CKAP4Q07065 602 aaKnown RBP21.38■■□□□ 1.01
ATRN-201ENST00000262919 PPP4R3BQ5MIZ7 849 aa21.38■■□□□ 1.01
ATRN-201ENST00000262919 SRGAP3O43295 1099 aa21.38■■□□□ 1.01
ATRN-201ENST00000262919 STARD3NLO95772 234 aa21.38■■□□□ 1.01
ATRN-201ENST00000262919 STK3Q13188 491 aa21.38■■□□□ 1.01
ATRN-201ENST00000262919 CTCFLQ8NI51 663 aaPredicted RBP21.38■■□□□ 1.01
ATRN-201ENST00000262919 DDX46Q7L014 1031 aaKnown RBP21.38■■□□□ 1.01
ATRN-201ENST00000262919 ERICH4A6NGS2 130 aa21.38■■□□□ 1.01
ATRN-201ENST00000262919 FMNL3Q8IVF7 1028 aa21.38■■□□□ 1.01
ATRN-201ENST00000262919 STX1AQ16623 288 aa21.38■■□□□ 1.01
ATRN-201ENST00000262919 SMARCC1Q92922 1105 aaPredicted RBP21.38■■□□□ 1.01
ATRN-201ENST00000262919 TTC14Q96N46 770 aa21.38■■□□□ 1.01
ATRN-201ENST00000262919 DDX19AQ9NUU7 478 aaKnown RBP21.37■■□□□ 1.01
ATRN-201ENST00000262919 DNAAF4Q8WXU2 420 aa21.37■■□□□ 1.01
ATRN-201ENST00000262919 FERMT2Q96AC1 680 aa21.37■■□□□ 1.01
ATRN-201ENST00000262919 GTPBP4Q9BZE4 634 aaKnown RBP21.37■■□□□ 1.01
ATRN-201ENST00000262919 ABCC11Q96J66 1382 aa21.36■■□□□ 1.01
ATRN-201ENST00000262919 KIF5BP33176 963 aa21.36■■□□□ 1.01
ATRN-201ENST00000262919 CAVIN4Q5BKX8 364 aa21.36■■□□□ 1.01
ATRN-201ENST00000262919 ANKRD30BQ9BXX2 1392 aa21.36■■□□□ 1.01
ATRN-201ENST00000262919 NKTRP30414 1462 aaKnown RBP21.36■■□□□ 1.01
ATRN-201ENST00000262919 DAAM2Q86T65 1068 aa21.36■■□□□ 1.01
ATRN-201ENST00000262919 CCDC155Q8N6L0 562 aa21.36■■□□□ 1.01
ATRN-201ENST00000262919 PPP2R1AP30153 589 aa21.36■■□□□ 1.01
ATRN-201ENST00000262919 HSPA4P34932 840 aa21.35■■□□□ 1.01
ATRN-201ENST00000262919 C8orf76Q96K31 380 aa21.35■■□□□ 1.01
ATRN-201ENST00000262919 DRC1Q96MC2 740 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms