RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 CYP2E1P05181 493 aaPredicted RBP20.56■□□□□ 0.88
PDE4C-201ENST00000262805 TUBGCP6Q96RT7 1819 aa20.55■□□□□ 0.88
PDE4C-201ENST00000262805 SALL3Q9BXA9 1300 aa20.55■□□□□ 0.88
PDE4C-201ENST00000262805 MARF1Q9Y4F3 1742 aaKnown RBP20.55■□□□□ 0.88
PDE4C-201ENST00000262805 REC8O95072 547 aa20.55■□□□□ 0.88
PDE4C-201ENST00000262805 MCTP1Q6DN14 999 aa20.55■□□□□ 0.88
PDE4C-201ENST00000262805 IL17REQ8NFR9 667 aa20.55■□□□□ 0.88
PDE4C-201ENST00000262805 LTV1Q96GA3 475 aaPredicted RBP20.55■□□□□ 0.88
PDE4C-201ENST00000262805 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
PDE4C-201ENST00000262805 CHAMP1Q96JM3 812 aa20.54■□□□□ 0.88
PDE4C-201ENST00000262805 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
PDE4C-201ENST00000262805 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
PDE4C-201ENST00000262805 EIF5BO60841 1220 aaKnown RBP20.54■□□□□ 0.88
PDE4C-201ENST00000262805 HOXC9P31274 260 aa20.54■□□□□ 0.88
PDE4C-201ENST00000262805 DDX49Q9Y6V7 483 aaKnown RBP20.54■□□□□ 0.88
PDE4C-201ENST00000262805 TBX22Q9Y458 520 aa20.53■□□□□ 0.88
PDE4C-201ENST00000262805 ERBB4Q15303 1308 aa20.53■□□□□ 0.88
PDE4C-201ENST00000262805 GOLGA6L22H0YM25 854 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 ST18O60284 1047 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 PTMSP20962 102 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 ZDHHC9Q9Y397 364 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 ARHGAP23Q9P227 1491 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 SLIT1O75093 1534 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 KLHL40Q2TBA0 621 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 LRRCC1Q9C099 1032 aa20.52■□□□□ 0.88
PDE4C-201ENST00000262805 LRRFIP2Q9Y608 721 aaKnown RBP20.52■□□□□ 0.88
PDE4C-201ENST00000262805 NUCB2P80303 420 aa20.51■□□□□ 0.87
PDE4C-201ENST00000262805 SETD1BQ9UPS6 1966 aaKnown RBP20.51■□□□□ 0.87
PDE4C-201ENST00000262805 ATP8B2P98198 1209 aa20.5■□□□□ 0.87
PDE4C-201ENST00000262805 KDM4FA0A1W2PPD8 638 aa20.5■□□□□ 0.87
PDE4C-201ENST00000262805 MX1P20591 662 aa20.5■□□□□ 0.87
PDE4C-201ENST00000262805 LMBRD1Q9NUN5 540 aa20.5■□□□□ 0.87
PDE4C-201ENST00000262805 PALD1Q9ULE6 856 aa20.5■□□□□ 0.87
PDE4C-201ENST00000262805 HTATSF1O43719 755 aaKnown RBP20.49■□□□□ 0.87
PDE4C-201ENST00000262805 UNC5CLQ8IV45 518 aa20.49■□□□□ 0.87
PDE4C-201ENST00000262805 MAP3K5Q99683 1374 aa20.49■□□□□ 0.87
PDE4C-201ENST00000262805 ESYT1Q9BSJ8 1104 aa20.49■□□□□ 0.87
PDE4C-201ENST00000262805 IBTKQ9P2D0 1353 aaPredicted RBP20.49■□□□□ 0.87
PDE4C-201ENST00000262805 GNAI3P08754 354 aa20.49■□□□□ 0.87
PDE4C-201ENST00000262805 KCNA6P17658 529 aa20.49■□□□□ 0.87
PDE4C-201ENST00000262805 CLCN1P35523 988 aa20.49■□□□□ 0.87
PDE4C-201ENST00000262805 PHAXQ9H814 394 aaKnown RBP20.49■□□□□ 0.87
PDE4C-201ENST00000262805 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
PDE4C-201ENST00000262805 NEK4P51957 841 aa20.48■□□□□ 0.87
PDE4C-201ENST00000262805 RILPL2Q969X0 211 aa20.48■□□□□ 0.87
PDE4C-201ENST00000262805 ABTB2Q8N961 1025 aa20.47■□□□□ 0.87
PDE4C-201ENST00000262805 NCLP19338 710 aaKnown RBP20.47■□□□□ 0.87
PDE4C-201ENST00000262805 FOXD4L5Q5VV16 416 aaPredicted RBP20.47■□□□□ 0.87
PDE4C-201ENST00000262805 CAVIN1Q6NZI2 390 aaKnown RBP20.47■□□□□ 0.87
PDE4C-201ENST00000262805 FOXD4L4Q8WXT5 416 aaPredicted RBP20.47■□□□□ 0.87
PDE4C-201ENST00000262805 CWC22Q9HCG8 908 aaKnown RBP20.47■□□□□ 0.87
PDE4C-201ENST00000262805 CACNA1FO60840 1977 aa20.47■□□□□ 0.87
PDE4C-201ENST00000262805 TRIM6-TRIM34B2RNG4 842 aa20.46■□□□□ 0.87
PDE4C-201ENST00000262805 TAF7Q15545 349 aaPredicted RBP20.46■□□□□ 0.87
PDE4C-201ENST00000262805 IL25Q9H293 177 aa20.46■□□□□ 0.87
PDE4C-201ENST00000262805 IL1RAPL2Q9NP60 686 aa20.46■□□□□ 0.87
PDE4C-201ENST00000262805 CHMLP26374 656 aa20.46■□□□□ 0.87
PDE4C-201ENST00000262805 TMX3Q96JJ7 454 aa20.45■□□□□ 0.86
PDE4C-201ENST00000262805 N4BP2Q86UW6 1770 aaPredicted RBP20.45■□□□□ 0.86
PDE4C-201ENST00000262805 ESPNB1AK53 854 aa20.45■□□□□ 0.86
PDE4C-201ENST00000262805 NOL8Q76FK4 1167 aaKnown RBP20.45■□□□□ 0.86
PDE4C-201ENST00000262805 C14orf37Q86TY3 774 aa20.45■□□□□ 0.86
PDE4C-201ENST00000262805 PRPF40AO75400 957 aaKnown RBP20.44■□□□□ 0.86
PDE4C-201ENST00000262805 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
PDE4C-201ENST00000262805 ANO2Q9NQ90 1003 aa20.44■□□□□ 0.86
PDE4C-201ENST00000262805 NASPP49321 788 aaPredicted RBP20.43■□□□□ 0.86
PDE4C-201ENST00000262805 GPT2Q8TD30 523 aa20.43■□□□□ 0.86
PDE4C-201ENST00000262805 RBM27Q9P2N5 1060 aaKnown RBP20.43■□□□□ 0.86
PDE4C-201ENST00000262805 UBTFL1P0CB47 393 aaPredicted RBP20.43■□□□□ 0.86
PDE4C-201ENST00000262805 ZSCAN23Q3MJ62 389 aa20.43■□□□□ 0.86
PDE4C-201ENST00000262805 NUTM1Q86Y26 1132 aa20.43■□□□□ 0.86
PDE4C-201ENST00000262805 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
PDE4C-201ENST00000262805 STAP2Q9UGK3 403 aa20.43■□□□□ 0.86
PDE4C-201ENST00000262805 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
PDE4C-201ENST00000262805 EIF2S2P20042 333 aaKnown RBP20.42■□□□□ 0.86
PDE4C-201ENST00000262805 ANKARQ7Z5J8 1434 aa20.41■□□□□ 0.86
PDE4C-201ENST00000262805 LTN1O94822 1766 aa20.41■□□□□ 0.86
PDE4C-201ENST00000262805 MAP4K4O95819 1239 aaPredicted RBP20.41■□□□□ 0.86
PDE4C-201ENST00000262805 THEMISQ8N1K5 641 aaPredicted RBP20.41■□□□□ 0.86
PDE4C-201ENST00000262805 TRIM44Q96DX7 344 aaPredicted RBP20.41■□□□□ 0.86
PDE4C-201ENST00000262805 LGR6Q9HBX8 967 aa20.41■□□□□ 0.86
PDE4C-201ENST00000262805 NSFL1CQ9UNZ2 370 aaKnown RBP20.41■□□□□ 0.86
PDE4C-201ENST00000262805 KCNQ3O43525 872 aa20.4■□□□□ 0.86
PDE4C-201ENST00000262805 ZNF445P59923 1031 aa20.4■□□□□ 0.86
PDE4C-201ENST00000262805 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
PDE4C-201ENST00000262805 SSH3Q8TE77 659 aa20.4■□□□□ 0.86
PDE4C-201ENST00000262805 UPF3BQ9BZI7 483 aaKnown RBP20.4■□□□□ 0.86
PDE4C-201ENST00000262805 PXDNLA1KZ92 1463 aa20.4■□□□□ 0.86
PDE4C-201ENST00000262805 SOS1Q07889 1333 aaPredicted RBP20.4■□□□□ 0.86
PDE4C-201ENST00000262805 USP54Q70EL1 1684 aa20.39■□□□□ 0.85
PDE4C-201ENST00000262805 ANXA1P04083 346 aa20.38■□□□□ 0.85
PDE4C-201ENST00000262805 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
PDE4C-201ENST00000262805 NBPF6Q5VWK0 638 aa20.38■□□□□ 0.85
PDE4C-201ENST00000262805 NBPF4Q96M43 638 aa20.38■□□□□ 0.85
PDE4C-201ENST00000262805 SURF6O75683 361 aaKnown RBP20.37■□□□□ 0.85
PDE4C-201ENST00000262805 NAP1L5Q96NT1 182 aaPredicted RBP20.37■□□□□ 0.85
PDE4C-201ENST00000262805 CHPF2Q9P2E5 772 aa20.37■□□□□ 0.85
PDE4C-201ENST00000262805 CEMIPQ8WUJ3 1361 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms