RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 PCDH11XQ9BZA7 1347 aa23.58■■□□□ 1.37
GSDMD-201ENST00000262580 PCDH11YQ9BZA8 1340 aa23.58■■□□□ 1.37
GSDMD-201ENST00000262580 BTBD11A6QL63 1104 aa23.58■■□□□ 1.37
GSDMD-201ENST00000262580 ATF7IPQ6VMQ6 1270 aa23.58■■□□□ 1.37
GSDMD-201ENST00000262580 CCDC136Q96JN2 1154 aa23.58■■□□□ 1.37
GSDMD-201ENST00000262580 COG6Q9Y2V7 657 aa23.58■■□□□ 1.37
GSDMD-201ENST00000262580 DISP2A7MBM2 1401 aa23.58■■□□□ 1.37
GSDMD-201ENST00000262580 SLIT2O94813 1529 aa23.58■■□□□ 1.36
GSDMD-201ENST00000262580 KCNQ3O43525 872 aa23.57■■□□□ 1.36
GSDMD-201ENST00000262580 FTSJ3Q8IY81 847 aaKnown RBP23.55■■□□□ 1.36
GSDMD-201ENST00000262580 DZIP1LQ8IYY4 767 aaKnown RBP23.55■■□□□ 1.36
GSDMD-201ENST00000262580 DCAF5Q96JK2 942 aa23.55■■□□□ 1.36
GSDMD-201ENST00000262580 LRP6O75581 1613 aa23.55■■□□□ 1.36
GSDMD-201ENST00000262580 HSP90AB1P08238 724 aaKnown RBP23.55■■□□□ 1.36
GSDMD-201ENST00000262580 EIF4A1P60842 406 aaKnown RBP23.55■■□□□ 1.36
GSDMD-201ENST00000262580 SLC52A2Q9HAB3 445 aa23.55■■□□□ 1.36
GSDMD-201ENST00000262580 IPO8O15397 1037 aaKnown RBP23.54■■□□□ 1.36
GSDMD-201ENST00000262580 HSPA1LP34931 641 aa23.52■■□□□ 1.36
GSDMD-201ENST00000262580 MS4A1P11836 297 aa23.52■■□□□ 1.36
GSDMD-201ENST00000262580 TOGARAM1Q9Y4F4 1720 aa23.51■■□□□ 1.35
GSDMD-201ENST00000262580 SOS1Q07889 1333 aaPredicted RBP23.51■■□□□ 1.35
GSDMD-201ENST00000262580 MVPQ14764 893 aaKnown RBP23.5■■□□□ 1.35
GSDMD-201ENST00000262580 NFATC2IPQ8NCF5 419 aa23.5■■□□□ 1.35
GSDMD-201ENST00000262580 DDX54Q8TDD1 881 aaKnown RBP23.5■■□□□ 1.35
GSDMD-201ENST00000262580 ARHGAP45Q92619 1136 aa23.5■■□□□ 1.35
GSDMD-201ENST00000262580 SPATA31A1Q5TZJ5 1347 aa23.5■■□□□ 1.35
GSDMD-201ENST00000262580 SPATA31A6Q5VVP1 1343 aa23.5■■□□□ 1.35
GSDMD-201ENST00000262580 TMEM57Q8N5G2 664 aa23.49■■□□□ 1.35
GSDMD-201ENST00000262580 NKX1-1Q15270 411 aaPredicted RBP23.48■■□□□ 1.35
GSDMD-201ENST00000262580 NECTIN2Q92692 538 aa23.48■■□□□ 1.35
GSDMD-201ENST00000262580 C8orf37Q96NL8 207 aa23.48■■□□□ 1.35
GSDMD-201ENST00000262580 RGS12O14924 1447 aa23.48■■□□□ 1.35
GSDMD-201ENST00000262580 SLC39A6Q13433 755 aa23.47■■□□□ 1.35
GSDMD-201ENST00000262580 SLC4A2P04920 1241 aa23.47■■□□□ 1.35
GSDMD-201ENST00000262580 SPATA31A5Q5VU36 1347 aa23.47■■□□□ 1.35
GSDMD-201ENST00000262580 SPATA31A7Q8IWB4 1347 aa23.47■■□□□ 1.35
GSDMD-201ENST00000262580 HEG1Q9ULI3 1381 aa23.47■■□□□ 1.35
GSDMD-201ENST00000262580 C5P01031 1676 aa23.46■■□□□ 1.35
GSDMD-201ENST00000262580 HOXB7P09629 217 aa23.46■■□□□ 1.35
GSDMD-201ENST00000262580 CABP4P57796 275 aa23.46■■□□□ 1.35
GSDMD-201ENST00000262580 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
GSDMD-201ENST00000262580 ITPRIPQ8IWB1 547 aa23.46■■□□□ 1.35
GSDMD-201ENST00000262580 ABCC4O15439 1325 aa23.46■■□□□ 1.35
GSDMD-201ENST00000262580 TNS2Q63HR2 1409 aa23.46■■□□□ 1.35
GSDMD-201ENST00000262580 HDGFL1Q5TGJ6 251 aa23.45■■□□□ 1.34
GSDMD-201ENST00000262580 ZNF790Q6PG37 636 aa23.45■■□□□ 1.34
GSDMD-201ENST00000262580 API5Q9BZZ5 524 aaKnown RBP23.45■■□□□ 1.34
GSDMD-201ENST00000262580 BCL9LQ86UU0 1499 aa23.45■■□□□ 1.34
GSDMD-201ENST00000262580 CACNA1FO60840 1977 aa23.45■■□□□ 1.34
GSDMD-201ENST00000262580 PAPPAQ13219 1627 aa23.45■■□□□ 1.34
GSDMD-201ENST00000262580 G2E3Q7L622 706 aa23.45■■□□□ 1.34
GSDMD-201ENST00000262580 STK31Q9BXU1 1019 aa23.45■■□□□ 1.34
GSDMD-201ENST00000262580 UNC5CLQ8IV45 518 aa23.44■■□□□ 1.34
GSDMD-201ENST00000262580 NGLY1Q96IV0 654 aa23.44■■□□□ 1.34
GSDMD-201ENST00000262580 THRAP3Q9Y2W1 955 aaKnown RBP23.44■■□□□ 1.34
GSDMD-201ENST00000262580 GLI3P10071 1580 aa23.43■■□□□ 1.34
GSDMD-201ENST00000262580 PTPRCP08575 1304 aa23.42■■□□□ 1.34
GSDMD-201ENST00000262580 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
GSDMD-201ENST00000262580 ERVV-2B6SEH9 535 aa23.42■■□□□ 1.34
GSDMD-201ENST00000262580 GIGYF1O75420 1035 aaPredicted RBP23.42■■□□□ 1.34
GSDMD-201ENST00000262580 EIF2S2P20042 333 aaKnown RBP23.42■■□□□ 1.34
GSDMD-201ENST00000262580 DDX19BQ9UMR2 479 aa23.42■■□□□ 1.34
GSDMD-201ENST00000262580 CCDC9Q9Y3X0 531 aaKnown RBP23.42■■□□□ 1.34
GSDMD-201ENST00000262580 PRAMEF22A3QJZ6 481 aa23.42■■□□□ 1.34
GSDMD-201ENST00000262580 UBR2Q8IWV8 1755 aa23.41■■□□□ 1.34
GSDMD-201ENST00000262580 FNBP4Q8N3X1 1017 aaPredicted RBP23.4■■□□□ 1.34
GSDMD-201ENST00000262580 CDCA7Q9BWT1 371 aaPredicted RBP23.4■■□□□ 1.34
GSDMD-201ENST00000262580 ITGB4P16144 1822 aa23.4■■□□□ 1.34
GSDMD-201ENST00000262580 EXOC5O00471 708 aa23.4■■□□□ 1.34
GSDMD-201ENST00000262580 AAMPQ13685 434 aa23.39■■□□□ 1.33
GSDMD-201ENST00000262580 TTC5Q8N0Z6 440 aa23.39■■□□□ 1.33
GSDMD-201ENST00000262580 ZNF496Q96IT1 587 aaPredicted RBP23.39■■□□□ 1.33
GSDMD-201ENST00000262580 KDM2BQ8NHM5 1336 aa23.38■■□□□ 1.33
GSDMD-201ENST00000262580 FLIIQ13045 1269 aa23.38■■□□□ 1.33
GSDMD-201ENST00000262580 CHPF2Q9P2E5 772 aa23.38■■□□□ 1.33
GSDMD-201ENST00000262580 VPS72Q15906 364 aa23.37■■□□□ 1.33
GSDMD-201ENST00000262580 BARGINQ6ZT62 677 aa23.37■■□□□ 1.33
GSDMD-201ENST00000262580 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
GSDMD-201ENST00000262580 DOT1LQ8TEK3 1739 aa23.37■■□□□ 1.33
GSDMD-201ENST00000262580 LAMB4A4D0S4 1761 aa23.37■■□□□ 1.33
GSDMD-201ENST00000262580 KCPQ6ZWJ8 1503 aa23.37■■□□□ 1.33
GSDMD-201ENST00000262580 PCDHB15Q9Y5E8 787 aa23.36■■□□□ 1.33
GSDMD-201ENST00000262580 DDB1Q16531 1140 aa23.35■■□□□ 1.33
GSDMD-201ENST00000262580 MEX3CQ5U5Q3 659 aaKnown RBP23.35■■□□□ 1.33
GSDMD-201ENST00000262580 USP21Q9UK80 565 aa23.35■■□□□ 1.33
GSDMD-201ENST00000262580 FMNL2Q96PY5 1086 aa23.35■■□□□ 1.33
GSDMD-201ENST00000262580 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
GSDMD-201ENST00000262580 PHAXQ9H814 394 aaKnown RBP23.35■■□□□ 1.33
GSDMD-201ENST00000262580 N4BP2Q86UW6 1770 aaPredicted RBP23.34■■□□□ 1.33
GSDMD-201ENST00000262580 F6X3S4 739 aa23.34■■□□□ 1.33
GSDMD-201ENST00000262580 ANXA1P04083 346 aa23.34■■□□□ 1.33
GSDMD-201ENST00000262580 FKBP5Q13451 457 aaPredicted RBP23.34■■□□□ 1.33
GSDMD-201ENST00000262580 INTS3Q68E01 1043 aaKnown RBP23.34■■□□□ 1.33
GSDMD-201ENST00000262580 ZBTB40Q9NUA8 1239 aa23.34■■□□□ 1.33
GSDMD-201ENST00000262580 TMOD3Q9NYL9 352 aa23.34■■□□□ 1.33
GSDMD-201ENST00000262580 ZBTB7BO15156 539 aaPredicted RBP23.32■■□□□ 1.32
GSDMD-201ENST00000262580 FAM98CQ17RN3 349 aaKnown RBP23.32■■□□□ 1.32
GSDMD-201ENST00000262580 CENPQQ7L2Z9 268 aaPredicted RBP23.32■■□□□ 1.32
GSDMD-201ENST00000262580 IGHDP01880 384 aa23.32■■□□□ 1.32
GSDMD-201ENST00000262580 PROSER3Q2NL68 480 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms