RNA–Protein interactions for RNA: ENST00000262197.7

RBFA-201, Transcript of ribosome binding factor A, humanhuman

TSL 1 (best) BASIC

Gene RBFA, Length 1,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFA-201ENST00000262197 MRC1P22897 1456 aa31.51■■■□□ 2.63
RBFA-201ENST00000262197 MCM10Q7L590 875 aa31.5■■■□□ 2.63
RBFA-201ENST00000262197 SMARCC1Q92922 1105 aaPredicted RBP31.5■■■□□ 2.63
RBFA-201ENST00000262197 CEMIPQ8WUJ3 1361 aa31.49■■■□□ 2.63
RBFA-201ENST00000262197 DEFB132Q7Z7B7 95 aa31.49■■■□□ 2.63
RBFA-201ENST00000262197 EN1Q05925 392 aaPredicted RBP31.48■■■□□ 2.63
RBFA-201ENST00000262197 SIPA1L3O60292 1781 aaPredicted RBP31.48■■■□□ 2.63
RBFA-201ENST00000262197 DCTN1Q14203 1278 aa31.47■■■□□ 2.63
RBFA-201ENST00000262197 LY75O60449 1722 aa31.44■■■□□ 2.62
RBFA-201ENST00000262197 CAMKK2Q96RR4 588 aa31.43■■■□□ 2.62
RBFA-201ENST00000262197 PALLDQ8WX93 1383 aa31.43■■■□□ 2.62
RBFA-201ENST00000262197 EZH2Q15910 746 aaKnown RBP31.42■■■□□ 2.62
RBFA-201ENST00000262197 ASAP1Q9ULH1 1129 aa31.42■■■□□ 2.62
RBFA-201ENST00000262197 ATG3Q9NT62 314 aa31.41■■■□□ 2.62
RBFA-201ENST00000262197 HMGB2P26583 209 aaKnown RBP31.4■■■□□ 2.62
RBFA-201ENST00000262197 BTBD11A6QL63 1104 aa31.39■■■□□ 2.62
RBFA-201ENST00000262197 TAF7Q15545 349 aaPredicted RBP31.39■■■□□ 2.62
RBFA-201ENST00000262197 TXNRD1Q16881 649 aa31.39■■■□□ 2.62
RBFA-201ENST00000262197 NCBP3Q53F19 620 aaKnown RBP31.39■■■□□ 2.62
RBFA-201ENST00000262197 TTC5Q8N0Z6 440 aa31.39■■■□□ 2.62
RBFA-201ENST00000262197 NGEFQ8N5V2 710 aa31.39■■■□□ 2.62
RBFA-201ENST00000262197 TRIM35Q9UPQ4 493 aa31.39■■■□□ 2.62
RBFA-201ENST00000262197 RREB1Q92766 1687 aa31.38■■■□□ 2.61
RBFA-201ENST00000262197 CALD1Q05682 793 aaKnown RBP31.38■■■□□ 2.61
RBFA-201ENST00000262197 SLC27A3Q5K4L6 730 aa31.38■■■□□ 2.61
RBFA-201ENST00000262197 THUMPD2Q9BTF0 503 aaKnown RBP31.38■■■□□ 2.61
RBFA-201ENST00000262197 PAPPAQ13219 1627 aa31.38■■■□□ 2.61
RBFA-201ENST00000262197 CCDC27Q2M243 656 aa31.35■■■□□ 2.61
RBFA-201ENST00000262197 RBM42Q9BTD8 480 aaKnown RBP31.35■■■□□ 2.61
RBFA-201ENST00000262197 CCNL1Q9UK58 526 aaPredicted RBP31.35■■■□□ 2.61
RBFA-201ENST00000262197 SLC39A6Q13433 755 aa31.34■■■□□ 2.61
RBFA-201ENST00000262197 LOC102724428A0A0B4J2F2 783 aa31.33■■■□□ 2.61
RBFA-201ENST00000262197 SIK1P57059 783 aa31.33■■■□□ 2.61
RBFA-201ENST00000262197 ZNF790Q6PG37 636 aa31.33■■■□□ 2.61
RBFA-201ENST00000262197 NUP188Q5SRE5 1749 aa31.32■■■□□ 2.61
RBFA-201ENST00000262197 SENP3-EIF4A1A0A087X0R7 540 aa31.32■■■□□ 2.6
RBFA-201ENST00000262197 UBR2Q8IWV8 1755 aa31.32■■■□□ 2.6
RBFA-201ENST00000262197 PTCD1O75127 700 aaKnown RBP31.31■■■□□ 2.6
RBFA-201ENST00000262197 PROM2Q8N271 834 aa31.31■■■□□ 2.6
RBFA-201ENST00000262197 BABAM1Q9NWV8 329 aa31.31■■■□□ 2.6
RBFA-201ENST00000262197 SALL2Q9Y467 1007 aaPredicted RBP31.31■■■□□ 2.6
RBFA-201ENST00000262197 ZNF831Q5JPB2 1677 aa31.3■■■□□ 2.6
RBFA-201ENST00000262197 KDM3BQ7LBC6 1761 aa31.3■■■□□ 2.6
RBFA-201ENST00000262197 TAF1LQ8IZX4 1826 aa31.29■■■□□ 2.6
RBFA-201ENST00000262197 ATP6V1AP38606 617 aa31.29■■■□□ 2.6
RBFA-201ENST00000262197 NBPF14Q5TI25 921 aa31.28■■■□□ 2.6
RBFA-201ENST00000262197 WWC1Q8IX03 1113 aa31.28■■■□□ 2.6
RBFA-201ENST00000262197 TSPYL4Q9UJ04 414 aa31.28■■■□□ 2.6
RBFA-201ENST00000262197 LAS1LQ9Y4W2 734 aaKnown RBP31.28■■■□□ 2.6
RBFA-201ENST00000262197 C5P01031 1676 aa31.28■■■□□ 2.6
RBFA-201ENST00000262197 FMNL2Q96PY5 1086 aa31.27■■■□□ 2.6
RBFA-201ENST00000262197 MIS18AQ9NYP9 233 aa31.26■■■□□ 2.59
RBFA-201ENST00000262197 KCPQ6ZWJ8 1503 aa31.25■■■□□ 2.59
RBFA-201ENST00000262197 LRRC4BQ9NT99 713 aa31.25■■■□□ 2.59
RBFA-201ENST00000262197 GNAI1P63096 354 aa31.24■■■□□ 2.59
RBFA-201ENST00000262197 VSIG10Q8N0Z9 540 aa31.24■■■□□ 2.59
RBFA-201ENST00000262197 CFAP44Q96MT7 982 aa31.24■■■□□ 2.59
RBFA-201ENST00000262197 KCNQ4P56696 695 aa31.23■■■□□ 2.59
RBFA-201ENST00000262197 IFT57Q9NWB7 429 aa31.23■■■□□ 2.59
RBFA-201ENST00000262197 WDR63Q8IWG1 891 aa31.22■■■□□ 2.59
RBFA-201ENST00000262197 ZNF496Q96IT1 587 aaPredicted RBP31.22■■■□□ 2.59
RBFA-201ENST00000262197 CHL1O00533 1208 aa31.21■■■□□ 2.59
RBFA-201ENST00000262197 KCNQ3O43525 872 aa31.21■■■□□ 2.59
RBFA-201ENST00000262197 STK32BQ9NY57 414 aa31.21■■■□□ 2.59
RBFA-201ENST00000262197 CICQ96RK0 1608 aaPredicted RBP31.2■■■□□ 2.59
RBFA-201ENST00000262197 HEG1Q9ULI3 1381 aa31.2■■■□□ 2.59
RBFA-201ENST00000262197 TEX13AQ9BXU3 409 aaPredicted RBP31.2■■■□□ 2.59
RBFA-201ENST00000262197 IL16Q14005 1332 aa31.2■■■□□ 2.58
RBFA-201ENST00000262197 COL5A3P25940 1745 aaPredicted RBP31.19■■■□□ 2.58
RBFA-201ENST00000262197 TJP1Q07157 1748 aa31.19■■■□□ 2.58
RBFA-201ENST00000262197 ITPK1Q13572 414 aa31.18■■■□□ 2.58
RBFA-201ENST00000262197 SLC4A9Q96Q91 983 aa31.18■■■□□ 2.58
RBFA-201ENST00000262197 C4BP0C0L5 1744 aa31.18■■■□□ 2.58
RBFA-201ENST00000262197 SNRPA1P09661 255 aaKnown RBP31.16■■■□□ 2.58
RBFA-201ENST00000262197 ZNF853P0CG23 659 aa31.15■■■□□ 2.58
RBFA-201ENST00000262197 EIF4A1P60842 406 aaKnown RBP31.15■■■□□ 2.58
RBFA-201ENST00000262197 DNAJC10Q8IXB1 793 aa31.15■■■□□ 2.58
RBFA-201ENST00000262197 LINC00116Q8NCU8 138 aa31.15■■■□□ 2.58
RBFA-201ENST00000262197 AK7Q96M32 723 aa31.15■■■□□ 2.58
RBFA-201ENST00000262197 STARD3NLO95772 234 aa31.14■■■□□ 2.58
RBFA-201ENST00000262197 MBIPQ9NS73 344 aa31.14■■■□□ 2.58
RBFA-201ENST00000262197 HNRNPUQ00839 825 aaKnown RBP eCLIP31.13■■■□□ 2.57
RBFA-201ENST00000262197 SLC15A2Q16348 729 aa31.13■■■□□ 2.57
RBFA-201ENST00000262197 TFCP2L1Q9NZI6 479 aa31.12■■■□□ 2.57
RBFA-201ENST00000262197 LAMB4A4D0S4 1761 aa31.11■■■□□ 2.57
RBFA-201ENST00000262197 RC3H1Q5TC82 1133 aaKnown RBP31.11■■■□□ 2.57
RBFA-201ENST00000262197 AKT1S1Q96B36 256 aa31.11■■■□□ 2.57
RBFA-201ENST00000262197 ANO8Q9HCE9 1232 aaPredicted RBP31.11■■■□□ 2.57
RBFA-201ENST00000262197 CNTNAP4Q9C0A0 1308 aa31.1■■■□□ 2.57
RBFA-201ENST00000262197 MYH14Q7Z406 1995 aaKnown RBP31.1■■■□□ 2.57
RBFA-201ENST00000262197 QSER1Q2KHR3 1735 aa31.1■■■□□ 2.57
RBFA-201ENST00000262197 ZNF521Q96K83 1311 aa31.09■■■□□ 2.57
RBFA-201ENST00000262197 GOLGA2Q08379 1002 aa31.09■■■□□ 2.57
RBFA-201ENST00000262197 MYH16Q9H6N6 1097 aa31.09■■■□□ 2.57
RBFA-201ENST00000262197 GIGYF1O75420 1035 aaPredicted RBP31.08■■■□□ 2.57
RBFA-201ENST00000262197 CRKLP46109 303 aaKnown RBP31.08■■■□□ 2.57
RBFA-201ENST00000262197 ZNF827Q17R98 1081 aa31.08■■■□□ 2.57
RBFA-201ENST00000262197 UBR3Q6ZT12 1888 aa31.08■■■□□ 2.57
RBFA-201ENST00000262197 CYP19A1P11511 503 aaPredicted RBP31.07■■■□□ 2.56
RBFA-201ENST00000262197 TUBGCP6Q96RT7 1819 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms