RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 RIMS2Q9UQ26 1411 aa26.03■■□□□ 1.76
TTC9-201ENST00000256367 CASTP20810 708 aaKnown RBP26.03■■□□□ 1.76
TTC9-201ENST00000256367 GPS2Q13227 327 aa26.03■■□□□ 1.76
TTC9-201ENST00000256367 ASXL1Q8IXJ9 1541 aa26.03■■□□□ 1.76
TTC9-201ENST00000256367 IMMTQ16891 758 aaKnown RBP26.02■■□□□ 1.76
TTC9-201ENST00000256367 ABCC10Q5T3U5 1492 aa26.02■■□□□ 1.76
TTC9-201ENST00000256367 HSP90AB2PQ58FF8 381 aa26.02■■□□□ 1.76
TTC9-201ENST00000256367 ABCF2Q9UG63 623 aa26.02■■□□□ 1.76
TTC9-201ENST00000256367 HSP90AB3PQ58FF7 597 aa26.01■■□□□ 1.75
TTC9-201ENST00000256367 EPS15P42566 896 aa26.01■■□□□ 1.75
TTC9-201ENST00000256367 EXOC5O00471 708 aa26.01■■□□□ 1.75
TTC9-201ENST00000256367 IFIT5Q13325 482 aaKnown RBP26.01■■□□□ 1.75
TTC9-201ENST00000256367 HMGB2P26583 209 aaKnown RBP26■■□□□ 1.75
TTC9-201ENST00000256367 A0A087WZG4 1122 aa26■■□□□ 1.75
TTC9-201ENST00000256367 PPIP5K1Q6PFW1 1433 aa26■■□□□ 1.75
TTC9-201ENST00000256367 SMC2O95347 1197 aa26■■□□□ 1.75
TTC9-201ENST00000256367 IFIT1P09914 478 aaKnown RBP26■■□□□ 1.75
TTC9-201ENST00000256367 RBM5P52756 815 aaKnown RBP eCLIP26■■□□□ 1.75
TTC9-201ENST00000256367 NAP1L1P55209 391 aaKnown RBP26■■□□□ 1.75
TTC9-201ENST00000256367 ZPR1O75312 459 aa25.99■■□□□ 1.75
TTC9-201ENST00000256367 CCDC8Q9H0W5 538 aaPredicted RBP25.99■■□□□ 1.75
TTC9-201ENST00000256367 TRMT112Q9UI30 125 aaKnown RBP25.99■■□□□ 1.75
TTC9-201ENST00000256367 PRPF40BQ6NWY9 871 aaKnown RBP25.98■■□□□ 1.75
TTC9-201ENST00000256367 CCDC192P0DO97 292 aa25.98■■□□□ 1.75
TTC9-201ENST00000256367 TNMDQ9H2S6 317 aa25.98■■□□□ 1.75
TTC9-201ENST00000256367 MAP3K2Q9Y2U5 619 aa25.98■■□□□ 1.75
TTC9-201ENST00000256367 OFD1O75665 1012 aa25.98■■□□□ 1.75
TTC9-201ENST00000256367 U3KPZ7 1027 aaPredicted RBP25.98■■□□□ 1.75
TTC9-201ENST00000256367 CHRNA2Q15822 529 aa25.97■■□□□ 1.75
TTC9-201ENST00000256367 SOGA3Q5TF21 947 aa25.97■■□□□ 1.75
TTC9-201ENST00000256367 UPF3BQ9BZI7 483 aaKnown RBP25.97■■□□□ 1.75
TTC9-201ENST00000256367 PRM3Q9NNZ6 103 aa25.96■■□□□ 1.75
TTC9-201ENST00000256367 SPATA32Q96LK8 384 aa25.96■■□□□ 1.75
TTC9-201ENST00000256367 ZBTB3Q9H5J0 574 aa25.96■■□□□ 1.75
TTC9-201ENST00000256367 SHANK2Q9UPX8 1470 aa25.96■■□□□ 1.75
TTC9-201ENST00000256367 FILIP1LQ4L180 1135 aa25.96■■□□□ 1.75
TTC9-201ENST00000256367 MNS1Q8NEH6 495 aa25.96■■□□□ 1.75
TTC9-201ENST00000256367 PIK3R4Q99570 1358 aa25.96■■□□□ 1.75
TTC9-201ENST00000256367 DMRT2Q9Y5R5 561 aa25.96■■□□□ 1.75
TTC9-201ENST00000256367 PDIA4P13667 645 aaKnown RBP25.95■■□□□ 1.75
TTC9-201ENST00000256367 CFAP45Q9UL16 551 aa25.95■■□□□ 1.75
TTC9-201ENST00000256367 MCM4P33991 863 aa25.95■■□□□ 1.74
TTC9-201ENST00000256367 NOL7Q9UMY1 257 aaKnown RBP25.95■■□□□ 1.74
TTC9-201ENST00000256367 CAVIN4Q5BKX8 364 aa25.95■■□□□ 1.74
TTC9-201ENST00000256367 PI4KAP2A4QPH2 592 aa25.94■■□□□ 1.74
TTC9-201ENST00000256367 PI4KAP1Q8N8J0 262 aa25.94■■□□□ 1.74
TTC9-201ENST00000256367 CFAP43Q8NDM7 1665 aa25.94■■□□□ 1.74
TTC9-201ENST00000256367 NGLY1Q96IV0 654 aa25.94■■□□□ 1.74
TTC9-201ENST00000256367 TEX13AQ9BXU3 409 aaPredicted RBP25.94■■□□□ 1.74
TTC9-201ENST00000256367 PUS7Q96PZ0 661 aaKnown RBP25.94■■□□□ 1.74
TTC9-201ENST00000256367 TESK2Q96S53 571 aa25.94■■□□□ 1.74
TTC9-201ENST00000256367 KRT18P05783 430 aaKnown RBP25.93■■□□□ 1.74
TTC9-201ENST00000256367 PIP4K2AP48426 406 aaPredicted RBP25.93■■□□□ 1.74
TTC9-201ENST00000256367 PARD3Q8TEW0 1356 aa25.93■■□□□ 1.74
TTC9-201ENST00000256367 CCAR1Q8IX12 1150 aaKnown RBP25.93■■□□□ 1.74
TTC9-201ENST00000256367 ZSCAN29Q8IWY8 852 aaPredicted RBP25.93■■□□□ 1.74
TTC9-201ENST00000256367 FAM13BQ9NYF5 915 aa25.93■■□□□ 1.74
TTC9-201ENST00000256367 MAGEC2Q9UBF1 373 aaPredicted RBP25.93■■□□□ 1.74
TTC9-201ENST00000256367 DDX11Q96FC9 970 aa25.92■■□□□ 1.74
TTC9-201ENST00000256367 CCDC173Q0VFZ6 552 aa25.92■■□□□ 1.74
TTC9-201ENST00000256367 ANKRD18BA2A2Z9 1011 aa25.91■■□□□ 1.74
TTC9-201ENST00000256367 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
TTC9-201ENST00000256367 ARHGAP45Q92619 1136 aa25.91■■□□□ 1.74
TTC9-201ENST00000256367 SNRPA1P09661 255 aaKnown RBP25.91■■□□□ 1.74
TTC9-201ENST00000256367 GPTP24298 496 aa25.91■■□□□ 1.74
TTC9-201ENST00000256367 WASF1Q92558 559 aa25.91■■□□□ 1.74
TTC9-201ENST00000256367 R3HCC1Q9Y3T6 440 aaKnown RBP25.91■■□□□ 1.74
TTC9-201ENST00000256367 MSH6P52701 1360 aa25.91■■□□□ 1.74
TTC9-201ENST00000256367 CT47A1Q5JQC4 288 aaPredicted RBP25.9■■□□□ 1.74
TTC9-201ENST00000256367 CCDC83Q8IWF9 413 aa25.9■■□□□ 1.74
TTC9-201ENST00000256367 ECHDC1Q9NTX5 307 aa25.9■■□□□ 1.74
TTC9-201ENST00000256367 POLKQ9UBT6 870 aa25.9■■□□□ 1.74
TTC9-201ENST00000256367 EIF2AK4Q9P2K8 1649 aaKnown RBP25.9■■□□□ 1.74
TTC9-201ENST00000256367 BRPF1P55201 1214 aaPredicted RBP25.89■■□□□ 1.74
TTC9-201ENST00000256367 ATP5J2-PTCD1G3V325 749 aa25.89■■□□□ 1.73
TTC9-201ENST00000256367 PPP1R42Q7Z4L9 355 aa25.89■■□□□ 1.73
TTC9-201ENST00000256367 POLR3AO14802 1390 aaPredicted RBP25.89■■□□□ 1.73
TTC9-201ENST00000256367 MAP3K12Q12852 859 aa25.89■■□□□ 1.73
TTC9-201ENST00000256367 SLC5A1P13866 664 aa25.88■■□□□ 1.73
TTC9-201ENST00000256367 CWC25Q9NXE8 425 aaPredicted RBP25.88■■□□□ 1.73
TTC9-201ENST00000256367 IGHDP01880 384 aa25.88■■□□□ 1.73
TTC9-201ENST00000256367 EIF4A2Q14240 407 aaKnown RBP25.88■■□□□ 1.73
TTC9-201ENST00000256367 ANXA1P04083 346 aa25.88■■□□□ 1.73
TTC9-201ENST00000256367 ZRANB1Q9UGI0 708 aa25.88■■□□□ 1.73
TTC9-201ENST00000256367 ABCC2Q92887 1545 aa25.88■■□□□ 1.73
TTC9-201ENST00000256367 SMARCE1Q969G3 411 aa25.87■■□□□ 1.73
TTC9-201ENST00000256367 DACH1Q9UI36 760 aa25.87■■□□□ 1.73
TTC9-201ENST00000256367 NPHP3Q7Z494 1330 aa25.87■■□□□ 1.73
TTC9-201ENST00000256367 BMP2KLQ5H9B9 411 aa25.87■■□□□ 1.73
TTC9-201ENST00000256367 UBE3BQ7Z3V4 1068 aa25.87■■□□□ 1.73
TTC9-201ENST00000256367 NAPBQ9H115 298 aa25.87■■□□□ 1.73
TTC9-201ENST00000256367 SERPINC1P01008 464 aa25.87■■□□□ 1.73
TTC9-201ENST00000256367 KIF21AQ7Z4S6 1674 aa25.86■■□□□ 1.73
TTC9-201ENST00000256367 TNNT3P45378 269 aaPredicted RBP25.86■■□□□ 1.73
TTC9-201ENST00000256367 EVI5LQ96CN4 794 aa25.86■■□□□ 1.73
TTC9-201ENST00000256367 ARGLU1Q9NWB6 273 aaPredicted RBP25.86■■□□□ 1.73
TTC9-201ENST00000256367 MINDY4BA8MYZ0 360 aa25.86■■□□□ 1.73
TTC9-201ENST00000256367 SPC24Q8NBT2 197 aa25.86■■□□□ 1.73
TTC9-201ENST00000256367 ANKIB1Q9P2G1 1089 aa25.85■■□□□ 1.73
TTC9-201ENST00000256367 NUP62CLQ9H1M0 184 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms