RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SPATA31A6Q5VVP1 1343 aa12.15□□□□□ -0.46
NIP7-202ENST00000254941 PCDH11XQ9BZA7 1347 aa12.15□□□□□ -0.46
NIP7-202ENST00000254941 PCDH11YQ9BZA8 1340 aa12.15□□□□□ -0.46
NIP7-202ENST00000254941 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
NIP7-202ENST00000254941 KRT24Q2M2I5 525 aa12.14□□□□□ -0.47
NIP7-202ENST00000254941 EXOC6Q8TAG9 804 aa12.14□□□□□ -0.47
NIP7-202ENST00000254941 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
NIP7-202ENST00000254941 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
NIP7-202ENST00000254941 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
NIP7-202ENST00000254941 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
NIP7-202ENST00000254941 DISP2A7MBM2 1401 aa12.14□□□□□ -0.47
NIP7-202ENST00000254941 MRC1P22897 1456 aa12.14□□□□□ -0.47
NIP7-202ENST00000254941 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
NIP7-202ENST00000254941 SOS1Q07889 1333 aaPredicted RBP12.14□□□□□ -0.47
NIP7-202ENST00000254941 HSPA1LP34931 641 aa12.13□□□□□ -0.47
NIP7-202ENST00000254941 CRBNQ96SW2 442 aa12.13□□□□□ -0.47
NIP7-202ENST00000254941 BTBD11A6QL63 1104 aa12.12□□□□□ -0.47
NIP7-202ENST00000254941 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
NIP7-202ENST00000254941 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
NIP7-202ENST00000254941 SPATA31A1Q5TZJ5 1347 aa12.12□□□□□ -0.47
NIP7-202ENST00000254941 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
NIP7-202ENST00000254941 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
NIP7-202ENST00000254941 THRAP3Q9Y2W1 955 aaKnown RBP12.12□□□□□ -0.47
NIP7-202ENST00000254941 KAT6BQ8WYB5 2073 aa12.11□□□□□ -0.47
NIP7-202ENST00000254941 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.11□□□□□ -0.47
NIP7-202ENST00000254941 LRP6O75581 1613 aa12.11□□□□□ -0.47
NIP7-202ENST00000254941 IPO8O15397 1037 aaKnown RBP12.11□□□□□ -0.47
NIP7-202ENST00000254941 MS4A1P11836 297 aa12.11□□□□□ -0.47
NIP7-202ENST00000254941 TRIM27P14373 513 aa12.11□□□□□ -0.47
NIP7-202ENST00000254941 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
NIP7-202ENST00000254941 ATF7IPQ6VMQ6 1270 aa12.11□□□□□ -0.47
NIP7-202ENST00000254941 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
NIP7-202ENST00000254941 PANK1Q8TE04 598 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 SPATA31A5Q5VU36 1347 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 SPATA31A7Q8IWB4 1347 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 RLBP1P12271 317 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 UNC5CLQ8IV45 518 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 FNBP4Q8N3X1 1017 aaPredicted RBP12.1□□□□□ -0.47
NIP7-202ENST00000254941 NFATC2IPQ8NCF5 419 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 NGLY1Q96IV0 654 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
NIP7-202ENST00000254941 BCL9LQ86UU0 1499 aa12.1□□□□□ -0.47
NIP7-202ENST00000254941 HEG1Q9ULI3 1381 aa12.09□□□□□ -0.47
NIP7-202ENST00000254941 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
NIP7-202ENST00000254941 ITGB4P16144 1822 aa12.09□□□□□ -0.47
NIP7-202ENST00000254941 KCNQ3O43525 872 aa12.09□□□□□ -0.47
NIP7-202ENST00000254941 HOXB7P09629 217 aa12.09□□□□□ -0.47
NIP7-202ENST00000254941 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
NIP7-202ENST00000254941 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
NIP7-202ENST00000254941 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
NIP7-202ENST00000254941 C8orf37Q96NL8 207 aa12.09□□□□□ -0.47
NIP7-202ENST00000254941 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
NIP7-202ENST00000254941 ERVV-2B6SEH9 535 aa12.08□□□□□ -0.48
NIP7-202ENST00000254941 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.48
NIP7-202ENST00000254941 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.48
NIP7-202ENST00000254941 CLUAP1Q96AJ1 413 aa12.08□□□□□ -0.48
NIP7-202ENST00000254941 TNS2Q63HR2 1409 aa12.08□□□□□ -0.48
NIP7-202ENST00000254941 CABP4P57796 275 aa12.08□□□□□ -0.48
NIP7-202ENST00000254941 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
NIP7-202ENST00000254941 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
NIP7-202ENST00000254941 CCDC136Q96JN2 1154 aa12.08□□□□□ -0.48
NIP7-202ENST00000254941 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
NIP7-202ENST00000254941 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
NIP7-202ENST00000254941 EXOC5O00471 708 aa12.07□□□□□ -0.48
NIP7-202ENST00000254941 BARGINQ6ZT62 677 aa12.07□□□□□ -0.48
NIP7-202ENST00000254941 CHMP4AQ9BY43 222 aa12.07□□□□□ -0.48
NIP7-202ENST00000254941 PAPPAQ13219 1627 aa12.07□□□□□ -0.48
NIP7-202ENST00000254941 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
NIP7-202ENST00000254941 AAMPQ13685 434 aa12.06□□□□□ -0.48
NIP7-202ENST00000254941 VPS72Q15906 364 aa12.06□□□□□ -0.48
NIP7-202ENST00000254941 C5P01031 1676 aa12.06□□□□□ -0.48
NIP7-202ENST00000254941 PTPRCP08575 1304 aa12.06□□□□□ -0.48
NIP7-202ENST00000254941 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
NIP7-202ENST00000254941 MVPQ14764 893 aaKnown RBP12.06□□□□□ -0.48
NIP7-202ENST00000254941 STK31Q9BXU1 1019 aa12.06□□□□□ -0.48
NIP7-202ENST00000254941 SLC39A6Q13433 755 aa12.05□□□□□ -0.48
NIP7-202ENST00000254941 HDGFL1Q5TGJ6 251 aa12.05□□□□□ -0.48
NIP7-202ENST00000254941 API5Q9BZZ5 524 aaKnown RBP12.05□□□□□ -0.48
NIP7-202ENST00000254941 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
NIP7-202ENST00000254941 ABCC4O15439 1325 aa12.05□□□□□ -0.48
NIP7-202ENST00000254941 DDB1Q16531 1140 aa12.04□□□□□ -0.48
NIP7-202ENST00000254941 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
NIP7-202ENST00000254941 USP21Q9UK80 565 aa12.04□□□□□ -0.48
NIP7-202ENST00000254941 DDX19BQ9UMR2 479 aa12.04□□□□□ -0.48
NIP7-202ENST00000254941 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
NIP7-202ENST00000254941 RGS12O14924 1447 aa12.03□□□□□ -0.48
NIP7-202ENST00000254941 GLI3P10071 1580 aa12.03□□□□□ -0.48
NIP7-202ENST00000254941 LAMB4A4D0S4 1761 aa12.03□□□□□ -0.48
NIP7-202ENST00000254941 N4BP2Q86UW6 1770 aaPredicted RBP12.03□□□□□ -0.48
NIP7-202ENST00000254941 MEX3CQ5U5Q3 659 aaKnown RBP12.03□□□□□ -0.48
NIP7-202ENST00000254941 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
NIP7-202ENST00000254941 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
NIP7-202ENST00000254941 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
NIP7-202ENST00000254941 DOT1LQ8TEK3 1739 aa12.03□□□□□ -0.48
NIP7-202ENST00000254941 EIF2S2P20042 333 aaKnown RBP12.02□□□□□ -0.48
NIP7-202ENST00000254941 G2E3Q7L622 706 aa12.02□□□□□ -0.48
NIP7-202ENST00000254941 ITPRIPQ8IWB1 547 aa12.02□□□□□ -0.48
NIP7-202ENST00000254941 FLIIQ13045 1269 aa12.02□□□□□ -0.49
NIP7-202ENST00000254941 FMNL2Q96PY5 1086 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms