RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 LIMCH1Q9UPQ0 1083 aa22.81■■□□□ 1.24
PPFIA1-201ENST00000253925 MBD5Q9P267 1494 aa22.81■■□□□ 1.24
PPFIA1-201ENST00000253925 PRPF40BQ6NWY9 871 aaKnown RBP22.8■■□□□ 1.24
PPFIA1-201ENST00000253925 CCDC83Q8IWF9 413 aa22.8■■□□□ 1.24
PPFIA1-201ENST00000253925 DMRT2Q9Y5R5 561 aa22.8■■□□□ 1.24
PPFIA1-201ENST00000253925 MARCH6O60337 910 aa22.8■■□□□ 1.24
PPFIA1-201ENST00000253925 AMOTL1Q8IY63 956 aa22.79■■□□□ 1.24
PPFIA1-201ENST00000253925 CCDC183Q5T5S1 534 aa22.79■■□□□ 1.24
PPFIA1-201ENST00000253925 MPNDQ8N594 471 aa22.79■■□□□ 1.24
PPFIA1-201ENST00000253925 CEP170Q5SW79 1584 aa22.79■■□□□ 1.24
PPFIA1-201ENST00000253925 SART3Q15020 963 aaKnown RBP22.79■■□□□ 1.24
PPFIA1-201ENST00000253925 LARP1Q6PKG0 1096 aaKnown RBP22.79■■□□□ 1.24
PPFIA1-201ENST00000253925 MNS1Q8NEH6 495 aa22.79■■□□□ 1.24
PPFIA1-201ENST00000253925 DBF4Q9UBU7 674 aaPredicted RBP22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 PPIP5K1Q6PFW1 1433 aa22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 IPO7O95373 1038 aaKnown RBP22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 TTC39AQ5SRH9 613 aa22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 CCDC47Q96A33 483 aaKnown RBP22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 ARGLU1Q9NWB6 273 aaPredicted RBP22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 XRCC6P12956 609 aaKnown RBP eCLIP22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 BCL11BQ9C0K0 894 aaPredicted RBP22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 DCTPP1Q9H773 170 aa22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 ME1P48163 572 aa22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 SETQ01105 290 aaPredicted RBP22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 KIF6Q6ZMV9 814 aa22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 JMYQ8N9B5 988 aa22.78■■□□□ 1.24
PPFIA1-201ENST00000253925 PIK3R4Q99570 1358 aa22.77■■□□□ 1.24
PPFIA1-201ENST00000253925 XBP1P17861 261 aa22.77■■□□□ 1.24
PPFIA1-201ENST00000253925 UQCRHLA0A096LP55 91 aa22.77■■□□□ 1.24
PPFIA1-201ENST00000253925 UQCRHP07919 91 aa22.77■■□□□ 1.24
PPFIA1-201ENST00000253925 MAP3K11Q16584 847 aa22.77■■□□□ 1.24
PPFIA1-201ENST00000253925 HSP90AB2PQ58FF8 381 aa22.77■■□□□ 1.24
PPFIA1-201ENST00000253925 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.77■■□□□ 1.242e-6■■■□□ 16.2
PPFIA1-201ENST00000253925 TSPYL6Q8N831 410 aa22.76■■□□□ 1.23
PPFIA1-201ENST00000253925 DHX8Q14562 1220 aaKnown RBP22.76■■□□□ 1.23
PPFIA1-201ENST00000253925 NOL10Q9BSC4 688 aaKnown RBP22.76■■□□□ 1.23
PPFIA1-201ENST00000253925 PDE1AP54750 535 aa22.76■■□□□ 1.23
PPFIA1-201ENST00000253925 USHBP1Q8N6Y0 703 aa22.76■■□□□ 1.23
PPFIA1-201ENST00000253925 PTPRTO14522 1441 aa22.76■■□□□ 1.23
PPFIA1-201ENST00000253925 SMC2O95347 1197 aa22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 PHF8Q9UPP1 1060 aa22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 ATP7AQ04656 1500 aa22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 NOC3LQ8WTT2 800 aaKnown RBP22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 CTNNA3Q9UI47 895 aa22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 FMNL2Q96PY5 1086 aa22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 SCAND2PQ9GZW5 306 aaPredicted RBP22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 CCDC66A2RUB6 948 aa22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 PHACTR3Q96KR7 559 aa22.75■■□□□ 1.23
PPFIA1-201ENST00000253925 ECHDC1Q9NTX5 307 aa22.74■■□□□ 1.23
PPFIA1-201ENST00000253925 CEP126Q9P2H0 1117 aa22.74■■□□□ 1.23
PPFIA1-201ENST00000253925 TTC21AQ8NDW8 1320 aa22.74■■□□□ 1.23
PPFIA1-201ENST00000253925 PPP1R42Q7Z4L9 355 aa22.74■■□□□ 1.23
PPFIA1-201ENST00000253925 FERMT3Q86UX7 667 aa22.74■■□□□ 1.23
PPFIA1-201ENST00000253925 BRMS1Q9HCU9 246 aa22.74■■□□□ 1.23
PPFIA1-201ENST00000253925 EIF4A2Q14240 407 aaKnown RBP22.73■■□□□ 1.23
PPFIA1-201ENST00000253925 CCDC57Q2TAC2 916 aa22.73■■□□□ 1.23
PPFIA1-201ENST00000253925 TMX3Q96JJ7 454 aa22.73■■□□□ 1.23
PPFIA1-201ENST00000253925 ABCC1P33527 1531 aa22.73■■□□□ 1.23
PPFIA1-201ENST00000253925 ANAPC15P60006 121 aa22.73■■□□□ 1.23
PPFIA1-201ENST00000253925 BOLA2Q9H3K6 86 aa22.73■■□□□ 1.23
PPFIA1-201ENST00000253925 NPATQ14207 1427 aa22.73■■□□□ 1.23
PPFIA1-201ENST00000253925 RAB3GAP1Q15042 981 aa22.72■■□□□ 1.23
PPFIA1-201ENST00000253925 HYPKQ9NX55 129 aa22.72■■□□□ 1.23
PPFIA1-201ENST00000253925 ZBTB7BO15156 539 aaPredicted RBP22.72■■□□□ 1.23
PPFIA1-201ENST00000253925 CCP110O43303 1012 aa22.72■■□□□ 1.23
PPFIA1-201ENST00000253925 CCDC70Q6NSX1 233 aa22.72■■□□□ 1.23
PPFIA1-201ENST00000253925 RIMS2Q9UQ26 1411 aa22.72■■□□□ 1.23
PPFIA1-201ENST00000253925 CNNM1Q9NRU3 951 aa22.72■■□□□ 1.23
PPFIA1-201ENST00000253925 RBM42Q9BTD8 480 aaKnown RBP22.71■■□□□ 1.23
PPFIA1-201ENST00000253925 TSHZ3Q63HK5 1081 aa22.71■■□□□ 1.23
PPFIA1-201ENST00000253925 EVI5LQ96CN4 794 aa22.71■■□□□ 1.23
PPFIA1-201ENST00000253925 UHRF1BP1LA0JNW5 1464 aa22.71■■□□□ 1.23
PPFIA1-201ENST00000253925 MAGI2Q86UL8 1455 aa22.71■■□□□ 1.23
PPFIA1-201ENST00000253925 YTHDC2Q9H6S0 1430 aaKnown RBP22.71■■□□□ 1.23
PPFIA1-201ENST00000253925 G3V3G9 751 aa22.71■■□□□ 1.23
PPFIA1-201ENST00000253925 DCAF8Q5TAQ9 597 aa22.71■■□□□ 1.23
PPFIA1-201ENST00000253925 SBNO2Q9Y2G9 1366 aa22.7■■□□□ 1.23
PPFIA1-201ENST00000253925 RBM25P49756 843 aaKnown RBP22.7■■□□□ 1.23
PPFIA1-201ENST00000253925 CEP57L1Q8IYX8 460 aa22.7■■□□□ 1.23
PPFIA1-201ENST00000253925 ZSCAN25Q6NSZ9 544 aa22.7■■□□□ 1.22
PPFIA1-201ENST00000253925 MPRIPQ6WCQ1 1025 aa22.7■■□□□ 1.22
PPFIA1-201ENST00000253925 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
PPFIA1-201ENST00000253925 CEP85Q6P2H3 762 aa22.7■■□□□ 1.22
PPFIA1-201ENST00000253925 ESYT1Q9BSJ8 1104 aa22.7■■□□□ 1.22
PPFIA1-201ENST00000253925 MCM5P33992 734 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 XPCQ01831 940 aaPredicted RBP22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 ZSCAN23Q3MJ62 389 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 ZC3H6P61129 1189 aaKnown RBP22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 FKBP4Q02790 459 aaKnown RBP eCLIP22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 PLEKHM2Q8IWE5 1019 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 RHPN1Q8TCX5 695 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 PI4KAP2A4QPH2 592 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 STX6O43752 255 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 CLCN1P35523 988 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 C16orf71Q8IYS4 520 aaPredicted RBP22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 PDILTQ8N807 584 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 PI4KAP1Q8N8J0 262 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 ZRANB1Q9UGI0 708 aa22.69■■□□□ 1.22
PPFIA1-201ENST00000253925 ATP8B2P98198 1209 aa22.68■■□□□ 1.22
PPFIA1-201ENST00000253925 PCMTD1Q96MG8 357 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms