RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 ZBTB3Q9H5J0 574 aa16.86■□□□□ 0.29
ZC3H4-201ENST00000253048 TAF7Q15545 349 aaPredicted RBP16.85■□□□□ 0.29
ZC3H4-201ENST00000253048 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
ZC3H4-201ENST00000253048 NAPBQ9H115 298 aa16.85■□□□□ 0.29
ZC3H4-201ENST00000253048 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
ZC3H4-201ENST00000253048 ANKRD24Q8TF21 1146 aa16.85■□□□□ 0.29
ZC3H4-201ENST00000253048 ZBED9Q6R2W3 1325 aa16.85■□□□□ 0.29
ZC3H4-201ENST00000253048 TXLNBQ8N3L3 684 aa16.85■□□□□ 0.29
ZC3H4-201ENST00000253048 RANBP6O60518 1105 aaKnown RBP16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 CCDC181Q5TID7 509 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 CFTRP13569 1480 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 NAIPQ13075 1403 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 SMC2O95347 1197 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 FCHSD2O94868 740 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 IPO9Q96P70 1041 aaKnown RBP16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 VEZTQ9HBM0 779 aa16.84■□□□□ 0.29
ZC3H4-201ENST00000253048 ANKRD62A6NC57 917 aa16.83■□□□□ 0.29
ZC3H4-201ENST00000253048 MIS18AQ9NYP9 233 aa16.83■□□□□ 0.29
ZC3H4-201ENST00000253048 GJA3Q9Y6H8 435 aa16.83■□□□□ 0.29
ZC3H4-201ENST00000253048 ERLIN2O94905 339 aa16.83■□□□□ 0.29
ZC3H4-201ENST00000253048 GPR162Q16538 588 aa16.83■□□□□ 0.29
ZC3H4-201ENST00000253048 ACBD3Q9H3P7 528 aa16.83■□□□□ 0.29
ZC3H4-201ENST00000253048 ZNF408Q9H9D4 720 aa16.83■□□□□ 0.29
ZC3H4-201ENST00000253048 CCDC152Q4G0S7 254 aa16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 BAG6P46379 1132 aa16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 SEPT7Q16181 437 aaKnown RBP16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 CTCFLQ8NI51 663 aaPredicted RBP16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 ZCRB1Q8TBF4 217 aaKnown RBP16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 ERICH3Q5RHP9 1530 aa16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 WASLO00401 505 aaPredicted RBP16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 MNS1Q8NEH6 495 aa16.83■□□□□ 0.28
ZC3H4-201ENST00000253048 DCTN1Q14203 1278 aa16.82■□□□□ 0.28
ZC3H4-201ENST00000253048 HYPKQ9NX55 129 aa16.82■□□□□ 0.28
ZC3H4-201ENST00000253048 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
ZC3H4-201ENST00000253048 IQCA1Q86XH1 822 aa16.82■□□□□ 0.28
ZC3H4-201ENST00000253048 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 B4DLN1 442 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 MRPL12P52815 198 aaKnown RBP16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 NOM1Q5C9Z4 860 aaKnown RBP16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 CEP57L1Q8IYX8 460 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 MAP7D2Q96T17 732 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 NYXQ9GZU5 481 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 BAG4O95429 457 aaKnown RBP16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 CEP131Q9UPN4 1083 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 KIAA1107Q9UPP5 1409 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 BCAR3O75815 825 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 MCM10Q7L590 875 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 F8W031 263 aaPredicted RBP16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 NEK4P51957 841 aa16.81■□□□□ 0.28
ZC3H4-201ENST00000253048 NCKAP5LQ9HCH0 1330 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 KIAA0586Q9BVV6 1533 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 DUSP27Q5VZP5 1158 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 PDE4AP27815 886 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 SKIDA1Q1XH10 827 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 MCM2P49736 904 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 PLS1Q14651 629 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 TMEM266Q2M3C6 531 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 KRT32Q14532 448 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 TEX35Q5T0J7 233 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 NME9Q86XW9 330 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 UBA5Q9GZZ9 404 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 SAMM50Q9Y512 469 aa16.8■□□□□ 0.28
ZC3H4-201ENST00000253048 NLRP3Q96P20 1036 aa16.79■□□□□ 0.28
ZC3H4-201ENST00000253048 RNF41Q9H4P4 317 aaPredicted RBP16.79■□□□□ 0.28
ZC3H4-201ENST00000253048 RAB34Q9BZG1 259 aa16.79■□□□□ 0.28
ZC3H4-201ENST00000253048 BLOC1S2Q6QNY1 142 aa16.79■□□□□ 0.28
ZC3H4-201ENST00000253048 FERMT2Q96AC1 680 aa16.79■□□□□ 0.28
ZC3H4-201ENST00000253048 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
ZC3H4-201ENST00000253048 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
ZC3H4-201ENST00000253048 EYA3Q99504 573 aa16.78■□□□□ 0.28
ZC3H4-201ENST00000253048 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
ZC3H4-201ENST00000253048 ME1P48163 572 aa16.78■□□□□ 0.28
ZC3H4-201ENST00000253048 ANAPC15P60006 121 aa16.78■□□□□ 0.28
ZC3H4-201ENST00000253048 ZNF804AQ7Z570 1209 aa16.78■□□□□ 0.28
ZC3H4-201ENST00000253048 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
ZC3H4-201ENST00000253048 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
ZC3H4-201ENST00000253048 CETN2P41208 172 aa16.77■□□□□ 0.28
ZC3H4-201ENST00000253048 CCDC141Q6ZP82 1450 aa16.77■□□□□ 0.28
ZC3H4-201ENST00000253048 BRD4O60885 1362 aaPredicted RBP16.77■□□□□ 0.28
ZC3H4-201ENST00000253048 TNNI2P48788 182 aa16.77■□□□□ 0.28
ZC3H4-201ENST00000253048 CWC27Q6UX04 472 aaKnown RBP16.77■□□□□ 0.28
ZC3H4-201ENST00000253048 TTC16Q8NEE8 873 aa16.77■□□□□ 0.28
ZC3H4-201ENST00000253048 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.28
ZC3H4-201ENST00000253048 NSD3Q9BZ95 1437 aa16.77■□□□□ 0.27
ZC3H4-201ENST00000253048 PDE4BQ07343 736 aa16.77■□□□□ 0.27
ZC3H4-201ENST00000253048 TRMT1LQ7Z2T5 733 aaKnown RBP16.77■□□□□ 0.27
ZC3H4-201ENST00000253048 PPFIBP1Q86W92 1011 aa16.77■□□□□ 0.27
ZC3H4-201ENST00000253048 CKAP2LQ8IYA6 745 aa16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 ZGPATQ8N5A5 531 aaKnown RBP16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 CCDC39Q9UFE4 941 aa16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 MAGI1Q96QZ7 1491 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms