RNA–Protein interactions for RNA: ENST00000252487.9

TOMM40-201, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-201ENST00000252487 KAT6BQ8WYB5 2073 aa33.92■■■■□ 3.02
TOMM40-201ENST00000252487 RBM6P78332 1123 aaKnown RBP33.92■■■■□ 3.02
TOMM40-201ENST00000252487 POTEAQ6S8J7 498 aa33.92■■■■□ 3.02
TOMM40-201ENST00000252487 SLC52A2Q9HAB3 445 aa33.92■■■■□ 3.02
TOMM40-201ENST00000252487 TSPYL4Q9UJ04 414 aa33.92■■■■□ 3.02
TOMM40-201ENST00000252487 DOT1LQ8TEK3 1739 aa33.92■■■■□ 3.02
TOMM40-201ENST00000252487 NFATC2IPQ8NCF5 419 aa33.91■■■■□ 3.02
TOMM40-201ENST00000252487 FAM182BQ5T319 152 aa33.9■■■■□ 3.02
TOMM40-201ENST00000252487 BRWD3Q6RI45 1802 aa33.9■■■■□ 3.02
TOMM40-201ENST00000252487 CABP4P57796 275 aa33.89■■■■□ 3.02
TOMM40-201ENST00000252487 KDM3BQ7LBC6 1761 aa33.89■■■■□ 3.02
TOMM40-201ENST00000252487 EXOSC9Q06265 439 aaKnown RBP33.88■■■■□ 3.01
TOMM40-201ENST00000252487 ITGB4P16144 1822 aa33.88■■■■□ 3.01
TOMM40-201ENST00000252487 BTBD11A6QL63 1104 aa33.87■■■■□ 3.01
TOMM40-201ENST00000252487 KCNQ3O43525 872 aa33.87■■■■□ 3.01
TOMM40-201ENST00000252487 KRT24Q2M2I5 525 aa33.87■■■■□ 3.01
TOMM40-201ENST00000252487 ERVV-2B6SEH9 535 aa33.85■■■■□ 3.01
TOMM40-201ENST00000252487 RXRBP28702 533 aa33.84■■■■□ 3.01
TOMM40-201ENST00000252487 ACSBG1Q96GR2 724 aa33.84■■■■□ 3.01
TOMM40-201ENST00000252487 SLC39A6Q13433 755 aa33.84■■■■□ 3.01
TOMM40-201ENST00000252487 C8orf58Q8NAV2 365 aa33.82■■■■□ 3
TOMM40-201ENST00000252487 SYTL4Q96C24 671 aaPredicted RBP33.82■■■■□ 3
TOMM40-201ENST00000252487 ELL2O00472 640 aaPredicted RBP33.81■■■■□ 3
TOMM40-201ENST00000252487 TSPYL6Q8N831 410 aa33.81■■■■□ 3
TOMM40-201ENST00000252487 TMOD3Q9NYL9 352 aa33.8■■■■□ 3
TOMM40-201ENST00000252487 PRIM1P49642 420 aaKnown RBP33.79■■■■□ 3
TOMM40-201ENST00000252487 RGS12O14924 1447 aa33.79■■■■□ 3
TOMM40-201ENST00000252487 BABAM1Q9NWV8 329 aa33.79■■■■□ 3
TOMM40-201ENST00000252487 PIGBQ92521 554 aa33.78■■■■□ 3
TOMM40-201ENST00000252487 PAPPAQ13219 1627 aa33.76■■■□□ 2.99
TOMM40-201ENST00000252487 KCNQ2O43526 872 aa33.75■■■□□ 2.99
TOMM40-201ENST00000252487 BCL9O00512 1426 aa33.75■■■□□ 2.99
TOMM40-201ENST00000252487 ZNF790Q6PG37 636 aa33.74■■■□□ 2.99
TOMM40-201ENST00000252487 KRT27Q7Z3Y8 459 aa33.74■■■□□ 2.99
TOMM40-201ENST00000252487 RCAN3Q9UKA8 241 aa33.74■■■□□ 2.99
TOMM40-201ENST00000252487 EIF4A1P60842 406 aaKnown RBP33.73■■■□□ 2.99
TOMM40-201ENST00000252487 TWISTNBQ3B726 338 aaPredicted RBP33.72■■■□□ 2.99
TOMM40-201ENST00000252487 PTF1AQ7RTS3 328 aa33.72■■■□□ 2.99
TOMM40-201ENST00000252487 EP400Q96L91 3159 aa33.71■■■□□ 2.99
TOMM40-201ENST00000252487 ASAP1Q9ULH1 1129 aa33.7■■■□□ 2.99
TOMM40-201ENST00000252487 SBF2Q86WG5 1849 aa33.7■■■□□ 2.99
TOMM40-201ENST00000252487 VAMP4O75379 141 aa33.7■■■□□ 2.98
TOMM40-201ENST00000252487 UBR2Q8IWV8 1755 aa33.69■■■□□ 2.98
TOMM40-201ENST00000252487 TTC5Q8N0Z6 440 aa33.69■■■□□ 2.98
TOMM40-201ENST00000252487 ZNF496Q96IT1 587 aaPredicted RBP33.68■■■□□ 2.98
TOMM40-201ENST00000252487 TCERG1O14776 1098 aaKnown RBP33.67■■■□□ 2.98
TOMM40-201ENST00000252487 BCL2L13Q9BXK5 485 aa33.67■■■□□ 2.98
TOMM40-201ENST00000252487 NHSQ6T4R5 1651 aa33.67■■■□□ 2.98
TOMM40-201ENST00000252487 KCPQ6ZWJ8 1503 aa33.67■■■□□ 2.98
TOMM40-201ENST00000252487 PRAMEF22A3QJZ6 481 aa33.67■■■□□ 2.98
TOMM40-201ENST00000252487 ATG3Q9NT62 314 aa33.67■■■□□ 2.98
TOMM40-201ENST00000252487 SUPT16HQ9Y5B9 1047 aaKnown RBP33.67■■■□□ 2.98
TOMM40-201ENST00000252487 C5P01031 1676 aa33.66■■■□□ 2.98
TOMM40-201ENST00000252487 PTCD1O75127 700 aaKnown RBP33.65■■■□□ 2.98
TOMM40-201ENST00000252487 BCAR3O75815 825 aa33.65■■■□□ 2.98
TOMM40-201ENST00000252487 RARSP54136 660 aaKnown RBP33.64■■■□□ 2.98
TOMM40-201ENST00000252487 HEG1Q9ULI3 1381 aa33.63■■■□□ 2.97
TOMM40-201ENST00000252487 NECTIN2Q92692 538 aa33.63■■■□□ 2.97
TOMM40-201ENST00000252487 CT47B1P0C2W7 299 aaPredicted RBP33.62■■■□□ 2.97
TOMM40-201ENST00000252487 BTAF1O14981 1849 aa33.62■■■□□ 2.97
TOMM40-201ENST00000252487 SSH1Q8WYL5 1049 aa33.61■■■□□ 2.97
TOMM40-201ENST00000252487 FMNL2Q96PY5 1086 aa33.61■■■□□ 2.97
TOMM40-201ENST00000252487 GIGYF1O75420 1035 aaPredicted RBP33.6■■■□□ 2.97
TOMM40-201ENST00000252487 FAM196AQ6ZSG2 479 aa33.59■■■□□ 2.97
TOMM40-201ENST00000252487 EIF2S2P20042 333 aaKnown RBP33.57■■■□□ 2.96
TOMM40-201ENST00000252487 RBM42Q9BTD8 480 aaKnown RBP33.57■■■□□ 2.96
TOMM40-201ENST00000252487 SMC4Q9NTJ3 1288 aa33.57■■■□□ 2.96
TOMM40-201ENST00000252487 PLIN1O60240 522 aa33.54■■■□□ 2.96
TOMM40-201ENST00000252487 HDGFL1Q5TGJ6 251 aa33.54■■■□□ 2.96
TOMM40-201ENST00000252487 TRIM37O94972 964 aa33.53■■■□□ 2.96
TOMM40-201ENST00000252487 SLC4A9Q96Q91 983 aa33.53■■■□□ 2.96
TOMM40-201ENST00000252487 PALLDQ8WX93 1383 aa33.53■■■□□ 2.96
TOMM40-201ENST00000252487 SNRPA1P09661 255 aaKnown RBP33.53■■■□□ 2.96
TOMM40-201ENST00000252487 HOXB7P09629 217 aa33.52■■■□□ 2.96
TOMM40-201ENST00000252487 USP16Q9Y5T5 823 aa33.52■■■□□ 2.96
TOMM40-201ENST00000252487 LAMB4A4D0S4 1761 aa33.52■■■□□ 2.96
TOMM40-201ENST00000252487 ALDH1L2Q3SY69 923 aa33.5■■■□□ 2.95
TOMM40-201ENST00000252487 RRP1P56182 461 aaKnown RBP33.5■■■□□ 2.95
TOMM40-201ENST00000252487 MRPL50Q8N5N7 158 aaKnown RBP33.5■■■□□ 2.95
TOMM40-201ENST00000252487 ZNF428Q96B54 188 aa33.5■■■□□ 2.95
TOMM40-201ENST00000252487 BCL11BQ9C0K0 894 aaPredicted RBP33.5■■■□□ 2.95
TOMM40-201ENST00000252487 SOS1Q07889 1333 aaPredicted RBP33.49■■■□□ 2.95
TOMM40-201ENST00000252487 TJP1Q07157 1748 aa33.48■■■□□ 2.95
TOMM40-201ENST00000252487 FRAT1Q92837 279 aaPredicted RBP33.48■■■□□ 2.95
TOMM40-201ENST00000252487 CCDC30Q5VVM6 783 aa33.48■■■□□ 2.95
TOMM40-201ENST00000252487 DNAJC10Q8IXB1 793 aa33.48■■■□□ 2.95
TOMM40-201ENST00000252487 RNF123Q5XPI4 1314 aa33.47■■■□□ 2.95
TOMM40-201ENST00000252487 ANXA1P04083 346 aa33.47■■■□□ 2.95
TOMM40-201ENST00000252487 IRX6P78412 446 aaPredicted RBP33.47■■■□□ 2.95
TOMM40-201ENST00000252487 CHPF2Q9P2E5 772 aa33.47■■■□□ 2.95
TOMM40-201ENST00000252487 SMARCC1Q92922 1105 aaPredicted RBP33.46■■■□□ 2.95
TOMM40-201ENST00000252487 PIP4K2AP48426 406 aaPredicted RBP33.45■■■□□ 2.95
TOMM40-201ENST00000252487 LOC102724428A0A0B4J2F2 783 aa33.45■■■□□ 2.94
TOMM40-201ENST00000252487 SLC4A2P04920 1241 aa33.45■■■□□ 2.94
TOMM40-201ENST00000252487 KCNQ4P56696 695 aa33.45■■■□□ 2.94
TOMM40-201ENST00000252487 SIK1P57059 783 aa33.45■■■□□ 2.94
TOMM40-201ENST00000252487 PROSER3Q2NL68 480 aa33.44■■■□□ 2.94
TOMM40-201ENST00000252487 STK31Q9BXU1 1019 aa33.44■■■□□ 2.94
TOMM40-201ENST00000252487 TNNQ9UQP3 1299 aa33.44■■■□□ 2.94
TOMM40-201ENST00000252487 G2E3Q7L622 706 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms