RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 FOXD4L5Q5VV16 416 aaPredicted RBP12.49□□□□□ -0.41
COPB1-201ENST00000249923 ZGPATQ8N5A5 531 aaKnown RBP12.49□□□□□ -0.41
COPB1-201ENST00000249923 FOXD4L4Q8WXT5 416 aaPredicted RBP12.49□□□□□ -0.41
COPB1-201ENST00000249923 PDE1AP54750 535 aa12.49□□□□□ -0.41
COPB1-201ENST00000249923 IL25Q9H293 177 aa12.49□□□□□ -0.41
COPB1-201ENST00000249923 TBX22Q9Y458 520 aa12.49□□□□□ -0.41
COPB1-201ENST00000249923 FER1L4A9Z1Z3 1794 aa12.48□□□□□ -0.41
COPB1-201ENST00000249923 KCNA6P17658 529 aa12.48□□□□□ -0.41
COPB1-201ENST00000249923 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
COPB1-201ENST00000249923 ZDHHC9Q9Y397 364 aa12.48□□□□□ -0.41
COPB1-201ENST00000249923 ERBB4Q15303 1308 aa12.48□□□□□ -0.41
COPB1-201ENST00000249923 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
COPB1-201ENST00000249923 FLIIQ13045 1269 aa12.48□□□□□ -0.41
COPB1-201ENST00000249923 GRPEL1Q9HAV7 217 aa12.48□□□□□ -0.41
COPB1-201ENST00000249923 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
COPB1-201ENST00000249923 NGDNQ8NEJ9 315 aaKnown RBP12.47□□□□□ -0.41
COPB1-201ENST00000249923 RABEP1Q15276 862 aa12.47□□□□□ -0.41
COPB1-201ENST00000249923 BAG4O95429 457 aaKnown RBP12.47□□□□□ -0.41
COPB1-201ENST00000249923 AMPHP49418 695 aa12.47□□□□□ -0.41
COPB1-201ENST00000249923 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
COPB1-201ENST00000249923 MED1Q15648 1581 aaPredicted RBP12.47□□□□□ -0.41
COPB1-201ENST00000249923 NLRP6P59044 892 aa12.46□□□□□ -0.41
COPB1-201ENST00000249923 RTF1Q92541 710 aaKnown RBP12.46□□□□□ -0.41
COPB1-201ENST00000249923 PALD1Q9ULE6 856 aa12.46□□□□□ -0.42
COPB1-201ENST00000249923 CCT4P50991 539 aaKnown RBP12.45□□□□□ -0.42
COPB1-201ENST00000249923 RBM10P98175 930 aaKnown RBP12.45□□□□□ -0.42
COPB1-201ENST00000249923 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
COPB1-201ENST00000249923 NFAT5O94916 1531 aa12.45□□□□□ -0.42
COPB1-201ENST00000249923 MRE11P49959 708 aa12.45□□□□□ -0.42
COPB1-201ENST00000249923 FOXD4L6Q3SYB3 417 aaPredicted RBP12.45□□□□□ -0.42
COPB1-201ENST00000249923 FOXD4L3Q6VB84 417 aaPredicted RBP12.45□□□□□ -0.42
COPB1-201ENST00000249923 USP44Q9H0E7 712 aa12.45□□□□□ -0.42
COPB1-201ENST00000249923 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
COPB1-201ENST00000249923 IBTKQ9P2D0 1353 aaPredicted RBP12.45□□□□□ -0.42
COPB1-201ENST00000249923 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
COPB1-201ENST00000249923 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
COPB1-201ENST00000249923 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
COPB1-201ENST00000249923 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
COPB1-201ENST00000249923 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
COPB1-201ENST00000249923 GBP4Q96PP9 640 aa12.44□□□□□ -0.42
COPB1-201ENST00000249923 ANKARQ7Z5J8 1434 aa12.44□□□□□ -0.42
COPB1-201ENST00000249923 GNAI2P04899 355 aa12.44□□□□□ -0.42
COPB1-201ENST00000249923 FKBP5Q13451 457 aaPredicted RBP12.44□□□□□ -0.42
COPB1-201ENST00000249923 MPNDQ8N594 471 aa12.44□□□□□ -0.42
COPB1-201ENST00000249923 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
COPB1-201ENST00000249923 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
COPB1-201ENST00000249923 SETD1BQ9UPS6 1966 aaKnown RBP12.44□□□□□ -0.42
COPB1-201ENST00000249923 KDM3BQ7LBC6 1761 aa12.44□□□□□ -0.42
COPB1-201ENST00000249923 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
COPB1-201ENST00000249923 ERC2O15083 957 aa12.42□□□□□ -0.42
COPB1-201ENST00000249923 ATP8B2P98198 1209 aa12.42□□□□□ -0.42
COPB1-201ENST00000249923 LMBRD1Q9NUN5 540 aa12.42□□□□□ -0.42
COPB1-201ENST00000249923 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
COPB1-201ENST00000249923 KCNQ3O43525 872 aa12.42□□□□□ -0.42
COPB1-201ENST00000249923 LGR6Q9HBX8 967 aa12.42□□□□□ -0.42
COPB1-201ENST00000249923 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
COPB1-201ENST00000249923 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 ZMYND15Q9H091 742 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 MX1P20591 662 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 ESYT1Q9BSJ8 1104 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 FAM13BQ9NYF5 915 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 KLHL40Q2TBA0 621 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
COPB1-201ENST00000249923 NSFL1CQ9UNZ2 370 aaKnown RBP12.41□□□□□ -0.42
COPB1-201ENST00000249923 CHD2O14647 1828 aaKnown RBP12.4□□□□□ -0.42
COPB1-201ENST00000249923 HMMRO75330 724 aa12.4□□□□□ -0.42
COPB1-201ENST00000249923 CHMLP26374 656 aa12.4□□□□□ -0.42
COPB1-201ENST00000249923 MCTP1Q6DN14 999 aa12.4□□□□□ -0.42
COPB1-201ENST00000249923 GPT2Q8TD30 523 aa12.4□□□□□ -0.42
COPB1-201ENST00000249923 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
COPB1-201ENST00000249923 PXDNQ92626 1479 aa12.4□□□□□ -0.42
COPB1-201ENST00000249923 CRYBG1Q9Y4K1 1723 aa12.4□□□□□ -0.42
COPB1-201ENST00000249923 NOL8Q76FK4 1167 aaKnown RBP12.4□□□□□ -0.42
COPB1-201ENST00000249923 TAF7Q15545 349 aaPredicted RBP12.39□□□□□ -0.43
COPB1-201ENST00000249923 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
COPB1-201ENST00000249923 STAP2Q9UGK3 403 aa12.39□□□□□ -0.43
COPB1-201ENST00000249923 NBPF7P0C2Y1 421 aaPredicted RBP12.39□□□□□ -0.43
COPB1-201ENST00000249923 DNTTIP2Q5QJE6 756 aaKnown RBP12.39□□□□□ -0.43
COPB1-201ENST00000249923 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
COPB1-201ENST00000249923 REC8O95072 547 aa12.39□□□□□ -0.43
COPB1-201ENST00000249923 ANXA1P04083 346 aa12.38□□□□□ -0.43
COPB1-201ENST00000249923 SKOR2Q2VWA4 1001 aaPredicted RBP12.38□□□□□ -0.43
COPB1-201ENST00000249923 SSH3Q8TE77 659 aa12.38□□□□□ -0.43
COPB1-201ENST00000249923 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
COPB1-201ENST00000249923 PHRF1Q9P1Y6 1649 aaKnown RBP12.38□□□□□ -0.43
COPB1-201ENST00000249923 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
COPB1-201ENST00000249923 GNAI3P08754 354 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 CLCN1P35523 988 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 EIF4A1P60842 406 aaKnown RBP12.37□□□□□ -0.43
COPB1-201ENST00000249923 POLA2Q14181 598 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
COPB1-201ENST00000249923 PI4K2BQ8TCG2 481 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
COPB1-201ENST00000249923 ISY1Q9ULR0 285 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms