RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 TTC21BQ7Z4L5 1316 aa14.72□□□□□ -0.05
SEC61A1-201ENST00000243253 CWC22Q9HCG8 908 aaKnown RBP14.71□□□□□ -0.05
SEC61A1-201ENST00000243253 PTPRUQ92729 1446 aa14.71□□□□□ -0.05
SEC61A1-201ENST00000243253 RBSNQ9H1K0 784 aa14.71□□□□□ -0.05
SEC61A1-201ENST00000243253 MED1Q15648 1581 aaPredicted RBP14.71□□□□□ -0.06
SEC61A1-201ENST00000243253 PLEKHG3A1L390 1219 aa14.71□□□□□ -0.06
SEC61A1-201ENST00000243253 NASPP49321 788 aaPredicted RBP14.71□□□□□ -0.06
SEC61A1-201ENST00000243253 NUCB2P80303 420 aa14.71□□□□□ -0.06
SEC61A1-201ENST00000243253 G2E3Q7L622 706 aa14.71□□□□□ -0.06
SEC61A1-201ENST00000243253 KDM3BQ7LBC6 1761 aa14.7□□□□□ -0.06
SEC61A1-201ENST00000243253 CHAMP1Q96JM3 812 aa14.7□□□□□ -0.06
SEC61A1-201ENST00000243253 PDE1AP54750 535 aa14.7□□□□□ -0.06
SEC61A1-201ENST00000243253 CUL4AQ13619 759 aa14.7□□□□□ -0.06
SEC61A1-201ENST00000243253 PXDNLA1KZ92 1463 aa14.69□□□□□ -0.06
SEC61A1-201ENST00000243253 MAP3K19Q56UN5 1328 aa14.69□□□□□ -0.06
SEC61A1-201ENST00000243253 HSP90AB2PQ58FF8 381 aa14.69□□□□□ -0.06
SEC61A1-201ENST00000243253 DDX49Q9Y6V7 483 aaKnown RBP14.69□□□□□ -0.06
SEC61A1-201ENST00000243253 F6X3S4 739 aa14.68□□□□□ -0.06
SEC61A1-201ENST00000243253 MCTP1Q6DN14 999 aa14.68□□□□□ -0.06
SEC61A1-201ENST00000243253 HS1BP3Q53T59 392 aa14.68□□□□□ -0.06
SEC61A1-201ENST00000243253 TMEM63CQ9P1W3 806 aa14.68□□□□□ -0.06
SEC61A1-201ENST00000243253 FOXO3O43524 673 aa14.68□□□□□ -0.06
SEC61A1-201ENST00000243253 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
SEC61A1-201ENST00000243253 ZSCAN30Q86W11 494 aa14.67□□□□□ -0.06
SEC61A1-201ENST00000243253 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
SEC61A1-201ENST00000243253 TMEM2Q9UHN6 1383 aa14.67□□□□□ -0.06
SEC61A1-201ENST00000243253 ACEP12821 1306 aa14.67□□□□□ -0.06
SEC61A1-201ENST00000243253 IL25Q9H293 177 aa14.67□□□□□ -0.06
SEC61A1-201ENST00000243253 DIP2AQ14689 1571 aa14.67□□□□□ -0.06
SEC61A1-201ENST00000243253 ERC2O15083 957 aa14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 PALD1Q9ULE6 856 aa14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 BRD1O95696 1058 aa14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 MTHFSDQ2M296 383 aaKnown RBP14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 USHBP1Q8N6Y0 703 aa14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 NAP1L5Q96NT1 182 aaPredicted RBP14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 OFD1O75665 1012 aa14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 XPCQ01831 940 aaPredicted RBP14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 STAP2Q9UGK3 403 aa14.66□□□□□ -0.06
SEC61A1-201ENST00000243253 RRP9O43818 475 aaKnown RBP14.65□□□□□ -0.06
SEC61A1-201ENST00000243253 CAVIN1Q6NZI2 390 aaKnown RBP14.65□□□□□ -0.06
SEC61A1-201ENST00000243253 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.65□□□□□ -0.06
SEC61A1-201ENST00000243253 NOL7Q9UMY1 257 aaKnown RBP14.65□□□□□ -0.06
SEC61A1-201ENST00000243253 IGSF1Q8N6C5 1336 aa14.65□□□□□ -0.06
SEC61A1-201ENST00000243253 ZNF500O60304 480 aaPredicted RBP14.65□□□□□ -0.06
SEC61A1-201ENST00000243253 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
SEC61A1-201ENST00000243253 RBM27Q9P2N5 1060 aaKnown RBP14.65□□□□□ -0.06
SEC61A1-201ENST00000243253 TMX3Q96JJ7 454 aa14.64□□□□□ -0.07
SEC61A1-201ENST00000243253 ESYT1Q9BSJ8 1104 aa14.64□□□□□ -0.07
SEC61A1-201ENST00000243253 TAOK2Q9UL54 1235 aa14.64□□□□□ -0.07
SEC61A1-201ENST00000243253 LTN1O94822 1766 aa14.64□□□□□ -0.07
SEC61A1-201ENST00000243253 PNMA6EA0A0J9YXQ4 647 aa14.64□□□□□ -0.07
SEC61A1-201ENST00000243253 REC8O95072 547 aa14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 EIF2S2P20042 333 aaKnown RBP14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 AMPHP49418 695 aa14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 GOLGA6L22H0YM25 854 aa14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 HAP1P54257 671 aaPredicted RBP14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 TERF1P54274 439 aa14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 LRSAM1Q6UWE0 723 aa14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 SBNO1A3KN83 1393 aa14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 PLEKHG1Q9ULL1 1385 aa14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 CHD2O14647 1828 aaKnown RBP14.63□□□□□ -0.07
SEC61A1-201ENST00000243253 ST18O60284 1047 aa14.62□□□□□ -0.07
SEC61A1-201ENST00000243253 CCT4P50991 539 aaKnown RBP14.62□□□□□ -0.07
SEC61A1-201ENST00000243253 UNC5CLQ8IV45 518 aa14.62□□□□□ -0.07
SEC61A1-201ENST00000243253 PRPF40AO75400 957 aaKnown RBP14.62□□□□□ -0.07
SEC61A1-201ENST00000243253 CHMLP26374 656 aa14.62□□□□□ -0.07
SEC61A1-201ENST00000243253 LMO7Q8WWI1 1683 aa14.62□□□□□ -0.07
SEC61A1-201ENST00000243253 PHRF1Q9P1Y6 1649 aaKnown RBP14.62□□□□□ -0.07
SEC61A1-201ENST00000243253 SLIT1O75093 1534 aa14.61□□□□□ -0.07
SEC61A1-201ENST00000243253 RPAP1Q9BWH6 1393 aaPredicted RBP14.61□□□□□ -0.07
SEC61A1-201ENST00000243253 TRIM44Q96DX7 344 aaPredicted RBP14.61□□□□□ -0.07
SEC61A1-201ENST00000243253 INTS4Q96HW7 963 aaKnown RBP14.61□□□□□ -0.07
SEC61A1-201ENST00000243253 ANAPC15P60006 121 aa14.61□□□□□ -0.07
SEC61A1-201ENST00000243253 RTF1Q92541 710 aaKnown RBP14.61□□□□□ -0.07
SEC61A1-201ENST00000243253 MAP4K4O95819 1239 aaPredicted RBP14.6□□□□□ -0.07
SEC61A1-201ENST00000243253 ARHGAP23Q9P227 1491 aa14.6□□□□□ -0.07
SEC61A1-201ENST00000243253 FLT4P35916 1363 aa14.6□□□□□ -0.07
SEC61A1-201ENST00000243253 RGPD2P0DJD1 1756 aa14.6□□□□□ -0.07
SEC61A1-201ENST00000243253 TPM2P07951 284 aa14.6□□□□□ -0.07
SEC61A1-201ENST00000243253 ATP8B2P98198 1209 aa14.6□□□□□ -0.07
SEC61A1-201ENST00000243253 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
SEC61A1-201ENST00000243253 CCDC9Q9Y3X0 531 aaKnown RBP14.6□□□□□ -0.07
SEC61A1-201ENST00000243253 EXOC6BQ9Y2D4 811 aa14.59□□□□□ -0.07
SEC61A1-201ENST00000243253 TRIM6-TRIM34B2RNG4 842 aa14.59□□□□□ -0.07
SEC61A1-201ENST00000243253 EPB41L2O43491 1005 aaKnown RBP14.59□□□□□ -0.07
SEC61A1-201ENST00000243253 RILPL2Q969X0 211 aa14.59□□□□□ -0.07
SEC61A1-201ENST00000243253 EYA1Q99502 592 aa14.59□□□□□ -0.07
SEC61A1-201ENST00000243253 AOX1Q06278 1338 aa14.58□□□□□ -0.07
SEC61A1-201ENST00000243253 ANXA1P04083 346 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 KIAA1211Q6ZU35 1233 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 GNAI2P04899 355 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 LTKP29376 864 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 ARID3AQ99856 593 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 USP44Q9H0E7 712 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 TNRQ92752 1358 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 MX1P20591 662 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 MPNDQ8N594 471 aa14.58□□□□□ -0.08
SEC61A1-201ENST00000243253 TTC21AQ8NDW8 1320 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms