RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 LOC102724428A0A0B4J2F2 783 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 RPS6KA4O75676 772 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 SIK1P57059 783 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 GRIPAP1Q4V328 841 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 PLEKHO1Q53GL0 409 aaPredicted RBP3.17□□□□□ -1.9
PRKD3-201ENST00000234179 C5P01031 1676 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 SOX12O15370 315 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 VEGFAP15692 232 aaPredicted RBP3.17□□□□□ -1.9
PRKD3-201ENST00000234179 AIDAQ96BJ3 306 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 DCAF5Q96JK2 942 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 MYCNP04198 464 aaPredicted RBP3.17□□□□□ -1.9
PRKD3-201ENST00000234179 DPY19L2Q6NUT2 758 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 PDGFDQ9GZP0 370 aaPredicted RBP3.17□□□□□ -1.9
PRKD3-201ENST00000234179 IQCA1LA6NCM1 817 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 FCHSD2O94868 740 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 DOT1LQ8TEK3 1739 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 RFC4P35249 363 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 PTF1AQ7RTS3 328 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 TEX13AQ9BXU3 409 aaPredicted RBP3.16□□□□□ -1.9
PRKD3-201ENST00000234179 LTBP3Q9NS15 1303 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 MMP10P09238 476 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 ARHGAP27Q6ZUM4 889 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 TNRC6CQ9HCJ0 1690 aaKnown RBP3.16□□□□□ -1.9
PRKD3-201ENST00000234179 LTN1O94822 1766 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 MEGF6O75095 1541 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 C4BP0C0L5 1744 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 GNPATO15228 680 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 NPM2Q86SE8 214 aaKnown RBP3.16□□□□□ -1.9
PRKD3-201ENST00000234179 BCS1LQ9Y276 419 aa3.16□□□□□ -1.9
PRKD3-201ENST00000234179 LMNB1P20700 586 aa3.15□□□□□ -1.9
PRKD3-201ENST00000234179 LTV1Q96GA3 475 aaPredicted RBP3.15□□□□□ -1.9
PRKD3-201ENST00000234179 CA12O43570 354 aa3.15□□□□□ -1.9
PRKD3-201ENST00000234179 DSG3P32926 999 aa3.15□□□□□ -1.9
PRKD3-201ENST00000234179 CTCFP49711 727 aaPredicted RBP3.15□□□□□ -1.9
PRKD3-201ENST00000234179 ATP6V1AP38606 617 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 C9orf131Q5VYM1 1079 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 CC2D2BQ6DHV5 1058 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 DNAJC5GQ8N7S2 189 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 PKD1L3Q7Z443 1732 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 KDRP35968 1356 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 MPRIPQ6WCQ1 1025 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 VSIG10Q8N0Z9 540 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 SLC12A5Q9H2X9 1139 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 GLTPD2A6NH11 291 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 KDM6AO15550 1401 aaPredicted RBP3.15□□□□□ -1.91
PRKD3-201ENST00000234179 C1orf141Q5JVX7 400 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 NBPF6Q5VWK0 638 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 CNKSR1Q969H4 720 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 NBPF4Q96M43 638 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 CREBZFQ9NS37 354 aa3.15□□□□□ -1.91
PRKD3-201ENST00000234179 WDR90Q96KV7 1748 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 ZPR1O75312 459 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 POTEHQ6S545 545 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 RNF181Q9P0P0 153 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 WWC3Q9ULE0 1092 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 C4AP0C0L4 1744 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 KIF13BQ9NQT8 1826 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 PHKG2P15735 406 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 PDE6BP35913 854 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 MSL1Q68DK7 614 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 CHADLQ6NUI6 762 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 ECE1P42892 770 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 MNX1P50219 401 aaPredicted RBP3.14□□□□□ -1.91
PRKD3-201ENST00000234179 PIGBQ92521 554 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 CLSPNQ9HAW4 1339 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 CYP27B1O15528 508 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 TTLL6Q8N841 843 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 USP42Q9H9J4 1324 aaKnown RBP3.14□□□□□ -1.91
PRKD3-201ENST00000234179 RGPD5Q99666 1765 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 FYB1O15117 783 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 SLC34A2O95436 690 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 DPEP1P16444 411 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 CABP4P57796 275 aa3.14□□□□□ -1.91
PRKD3-201ENST00000234179 ARFGEF1Q9Y6D6 1849 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 H0YIN7 160 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 MAP2K1Q02750 393 aaPredicted RBP3.13□□□□□ -1.91
PRKD3-201ENST00000234179 PNMA8AQ86V59 439 aaPredicted RBP3.13□□□□□ -1.91
PRKD3-201ENST00000234179 BEGAINQ9BUH8 593 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 KRTAP17-1Q9BYP8 105 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 ANKRD26Q9UPS8 1709 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 TUBGCP6Q96RT7 1819 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 HSPA1AP0DMV8 641 aaKnown RBP3.13□□□□□ -1.91
PRKD3-201ENST00000234179 HSPA1BP0DMV9 641 aaKnown RBP3.13□□□□□ -1.91
PRKD3-201ENST00000234179 GYS1P13807 737 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 LDHDQ86WU2 507 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 ZNF526Q8TF50 670 aaPredicted RBP3.13□□□□□ -1.91
PRKD3-201ENST00000234179 NARFQ9UHQ1 456 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 UBR3Q6ZT12 1888 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 TAF1LQ8IZX4 1826 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 PHF14O94880 888 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 STARD3NLO95772 234 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 STYK1Q6J9G0 422 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 REM2Q8IYK8 340 aaPredicted RBP3.13□□□□□ -1.91
PRKD3-201ENST00000234179 LINC00116Q8NCU8 138 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 TESK2Q96S53 571 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 NMRK2Q9NPI5 230 aa3.13□□□□□ -1.91
PRKD3-201ENST00000234179 ZNF530Q6P9A1 599 aaPredicted RBP3.12□□□□□ -1.91
PRKD3-201ENST00000234179 L3MBTL3Q96JM7 780 aaPredicted RBP3.12□□□□□ -1.91
PRKD3-201ENST00000234179 BRIP1Q9BX63 1249 aa3.12□□□□□ -1.91
PRKD3-201ENST00000234179 VPS33BQ9H267 617 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms