RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
TRIM23-201ENST00000231524 FAM177A1Q8N128 213 aaPredicted RBP11.58□□□□□ -0.56
TRIM23-201ENST00000231524 PAXBP1Q9Y5B6 917 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 KINO60870 393 aaKnown RBP11.58□□□□□ -0.56
TRIM23-201ENST00000231524 DTNBO60941 627 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 MEIS3Q99687 375 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 LIMCH1Q9UPQ0 1083 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 TRIM35Q9UPQ4 493 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 ZNF165P49910 485 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 PDE1AP54750 535 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 RNF20Q5VTR2 975 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 CWC15Q9P013 229 aaKnown RBP11.58□□□□□ -0.56
TRIM23-201ENST00000231524 ATAD2Q6PL18 1390 aa11.58□□□□□ -0.56
TRIM23-201ENST00000231524 DNM1Q05193 864 aaKnown RBP11.57□□□□□ -0.56
TRIM23-201ENST00000231524 ANKRD44Q8N8A2 993 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 UBXN4Q92575 508 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
TRIM23-201ENST00000231524 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
TRIM23-201ENST00000231524 MIS18AQ9NYP9 233 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRIM23-201ENST00000231524 FAM83GA6ND36 823 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 C8orf58Q8NAV2 365 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 CCDC9Q9Y3X0 531 aaKnown RBP11.57□□□□□ -0.56
TRIM23-201ENST00000231524 DUOX2Q9NRD8 1548 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 FAM200AQ8TCP9 573 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 ESYT1Q9BSJ8 1104 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 PRDM4Q9UKN5 801 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
TRIM23-201ENST00000231524 ATP2B3Q16720 1220 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 SULT6B1Q6IMI4 303 aa11.57□□□□□ -0.56
TRIM23-201ENST00000231524 NAT10Q9H0A0 1025 aaKnown RBP11.57□□□□□ -0.56
TRIM23-201ENST00000231524 GJB2P29033 226 aa11.56□□□□□ -0.56
TRIM23-201ENST00000231524 SKIDA1Q1XH10 827 aa11.56□□□□□ -0.56
TRIM23-201ENST00000231524 SRCIN1Q9C0H9 1055 aa11.56□□□□□ -0.56
TRIM23-201ENST00000231524 BRD1O95696 1058 aa11.56□□□□□ -0.56
TRIM23-201ENST00000231524 TMCO3Q6UWJ1 677 aa11.56□□□□□ -0.56
TRIM23-201ENST00000231524 LUZP1Q86V48 1076 aa11.56□□□□□ -0.56
TRIM23-201ENST00000231524 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
TRIM23-201ENST00000231524 ANO6Q4KMQ2 910 aa11.55□□□□□ -0.56
TRIM23-201ENST00000231524 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
TRIM23-201ENST00000231524 ADGRL2O95490 1459 aa11.55□□□□□ -0.56
TRIM23-201ENST00000231524 NOM1Q5C9Z4 860 aaKnown RBP11.55□□□□□ -0.56
TRIM23-201ENST00000231524 INTS4Q96HW7 963 aaKnown RBP11.55□□□□□ -0.56
TRIM23-201ENST00000231524 KIF2CQ99661 725 aa11.55□□□□□ -0.56
TRIM23-201ENST00000231524 PSMA5P28066 241 aa11.55□□□□□ -0.56
TRIM23-201ENST00000231524 RRS1Q15050 365 aaKnown RBP11.55□□□□□ -0.56
TRIM23-201ENST00000231524 MCM10Q7L590 875 aa11.55□□□□□ -0.56
TRIM23-201ENST00000231524 NOS1P29475 1434 aa11.54□□□□□ -0.56
TRIM23-201ENST00000231524 SHANK2Q9UPX8 1470 aa11.54□□□□□ -0.56
TRIM23-201ENST00000231524 PRPF40BQ6NWY9 871 aaKnown RBP11.54□□□□□ -0.56
TRIM23-201ENST00000231524 WAPLQ7Z5K2 1190 aa11.54□□□□□ -0.56
TRIM23-201ENST00000231524 CLASRPQ8N2M8 674 aaKnown RBP11.54□□□□□ -0.56
TRIM23-201ENST00000231524 ZNF518AQ6AHZ1 1483 aa11.54□□□□□ -0.56
TRIM23-201ENST00000231524 BMS1Q14692 1282 aaKnown RBP11.54□□□□□ -0.56
TRIM23-201ENST00000231524 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
TRIM23-201ENST00000231524 PYCARDQ9ULZ3 195 aa11.54□□□□□ -0.56
TRIM23-201ENST00000231524 F13A1P00488 732 aa11.54□□□□□ -0.56
TRIM23-201ENST00000231524 AMPHP49418 695 aa11.54□□□□□ -0.56
TRIM23-201ENST00000231524 DNAJC2Q99543 621 aaKnown RBP11.54□□□□□ -0.56
TRIM23-201ENST00000231524 DACT1Q9NYF0 836 aa11.54□□□□□ -0.56
TRIM23-201ENST00000231524 C9orf78Q9NZ63 289 aaPredicted RBP11.54□□□□□ -0.56
TRIM23-201ENST00000231524 CFAP65Q6ZU64 1925 aaKnown RBP11.54□□□□□ -0.56
TRIM23-201ENST00000231524 SKILP12757 684 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 PDILTQ8N807 584 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 AK7Q96M32 723 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 SYT1P21579 422 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 TYRO3Q06418 890 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 GABPB1Q06547 395 aaPredicted RBP11.53□□□□□ -0.56
TRIM23-201ENST00000231524 CDK19Q9BWU1 502 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 EMILIN1Q9Y6C2 1016 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 ZSCAN20P17040 1043 aaPredicted RBP11.53□□□□□ -0.56
TRIM23-201ENST00000231524 NUTM2GQ5VZR2 741 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 CEP85Q6P2H3 762 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 LEKR1Q6ZMV7 388 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 NECAB1Q8N987 351 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 ZNF397Q8NF99 534 aaPredicted RBP11.53□□□□□ -0.56
TRIM23-201ENST00000231524 SCAND2PQ9GZW5 306 aaPredicted RBP11.53□□□□□ -0.56
TRIM23-201ENST00000231524 PPP6R1Q9UPN7 881 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 ANAPC15P60006 121 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 ZFP91Q96JP5 570 aaPredicted RBP11.53□□□□□ -0.56
TRIM23-201ENST00000231524 PHACTR3Q96KR7 559 aa11.53□□□□□ -0.56
TRIM23-201ENST00000231524 TTC37Q6PGP7 1564 aa11.52□□□□□ -0.56
TRIM23-201ENST00000231524 ME1P48163 572 aa11.52□□□□□ -0.56
TRIM23-201ENST00000231524 HSP90B2PQ58FF3 399 aa11.52□□□□□ -0.56
TRIM23-201ENST00000231524 DDX11Q96FC9 970 aa11.52□□□□□ -0.56
TRIM23-201ENST00000231524 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.56
TRIM23-201ENST00000231524 DNAJC25Q9H1X3 360 aa11.52□□□□□ -0.56
TRIM23-201ENST00000231524 FYB1O15117 783 aa11.52□□□□□ -0.57
TRIM23-201ENST00000231524 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
TRIM23-201ENST00000231524 HSP90AB4PQ58FF6 505 aa11.52□□□□□ -0.57
TRIM23-201ENST00000231524 CEP57L1Q8IYX8 460 aa11.52□□□□□ -0.57
TRIM23-201ENST00000231524 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
TRIM23-201ENST00000231524 LRMPQ12912 555 aa11.52□□□□□ -0.57
TRIM23-201ENST00000231524 KRT24Q2M2I5 525 aa11.52□□□□□ -0.57
TRIM23-201ENST00000231524 BLOC1S2Q6QNY1 142 aa11.52□□□□□ -0.57
TRIM23-201ENST00000231524 GTF3C6Q969F1 213 aa11.52□□□□□ -0.57
TRIM23-201ENST00000231524 SRGAP3O43295 1099 aa11.51□□□□□ -0.57
TRIM23-201ENST00000231524 DDIT3P35638 169 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms