RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 SLC4A9Q96Q91 983 aa20.28■□□□□ 0.84
GATC-201ENST00000229384 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.84
GATC-201ENST00000229384 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
GATC-201ENST00000229384 POLD1P28340 1107 aa20.27■□□□□ 0.84
GATC-201ENST00000229384 MYH14Q7Z406 1995 aaKnown RBP20.26■□□□□ 0.83
GATC-201ENST00000229384 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
GATC-201ENST00000229384 DCAF8L1A6NGE4 600 aa20.25■□□□□ 0.83
GATC-201ENST00000229384 MSH5O43196 834 aa20.25■□□□□ 0.83
GATC-201ENST00000229384 YY1P25490 414 aa20.25■□□□□ 0.83
GATC-201ENST00000229384 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
GATC-201ENST00000229384 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
GATC-201ENST00000229384 ATP6V1AP38606 617 aa20.24■□□□□ 0.83
GATC-201ENST00000229384 AK7Q96M32 723 aa20.24■□□□□ 0.83
GATC-201ENST00000229384 ADAMTS7Q9UKP4 1686 aa20.23■□□□□ 0.83
GATC-201ENST00000229384 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.22■□□□□ 0.83
GATC-201ENST00000229384 NLGN2Q8NFZ4 835 aa20.22■□□□□ 0.83
GATC-201ENST00000229384 CICQ96RK0 1608 aaPredicted RBP20.22■□□□□ 0.83
GATC-201ENST00000229384 TJP1Q07157 1748 aa20.22■□□□□ 0.83
GATC-201ENST00000229384 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
GATC-201ENST00000229384 HMOX1P09601 288 aa20.21■□□□□ 0.83
GATC-201ENST00000229384 SSFA2P28290 1259 aa20.21■□□□□ 0.83
GATC-201ENST00000229384 CABP4P57796 275 aa20.21■□□□□ 0.83
GATC-201ENST00000229384 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.82
GATC-201ENST00000229384 NFATC2IPQ8NCF5 419 aa20.2■□□□□ 0.82
GATC-201ENST00000229384 PHF14O94880 888 aa20.19■□□□□ 0.82
GATC-201ENST00000229384 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
GATC-201ENST00000229384 KLHL34Q8N239 644 aa20.19■□□□□ 0.82
GATC-201ENST00000229384 UTRNP46939 3433 aa20.18■□□□□ 0.82
GATC-201ENST00000229384 MRC1P22897 1456 aa20.18■□□□□ 0.82
GATC-201ENST00000229384 GNPATO15228 680 aa20.18■□□□□ 0.82
GATC-201ENST00000229384 LGR6Q9HBX8 967 aa20.18■□□□□ 0.82
GATC-201ENST00000229384 C4AP0C0L4 1744 aa20.18■□□□□ 0.82
GATC-201ENST00000229384 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
GATC-201ENST00000229384 MTHFSDQ2M296 383 aaKnown RBP20.17■□□□□ 0.82
GATC-201ENST00000229384 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
GATC-201ENST00000229384 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
GATC-201ENST00000229384 CNTNAP4Q9C0A0 1308 aa20.15■□□□□ 0.82
GATC-201ENST00000229384 KIF13BQ9NQT8 1826 aa20.14■□□□□ 0.81
GATC-201ENST00000229384 SIPA1L3O60292 1781 aaPredicted RBP20.14■□□□□ 0.81
GATC-201ENST00000229384 RNMTO43148 476 aaKnown RBP20.14■□□□□ 0.81
GATC-201ENST00000229384 SLC52A2Q9HAB3 445 aa20.14■□□□□ 0.81
GATC-201ENST00000229384 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
GATC-201ENST00000229384 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
GATC-201ENST00000229384 GPR162Q16538 588 aa20.13■□□□□ 0.81
GATC-201ENST00000229384 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
GATC-201ENST00000229384 YBX3P16989 372 aaKnown RBP eCLIP20.12■□□□□ 0.81
GATC-201ENST00000229384 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
GATC-201ENST00000229384 KIAA1551Q9HCM1 1747 aa20.12■□□□□ 0.81
GATC-201ENST00000229384 RPS6KA4O75676 772 aa20.11■□□□□ 0.81
GATC-201ENST00000229384 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
GATC-201ENST00000229384 KCPQ6ZWJ8 1503 aa20.11■□□□□ 0.81
GATC-201ENST00000229384 TRAPPC3LQ5T215 181 aa20.1■□□□□ 0.81
GATC-201ENST00000229384 ADRA2BP18089 450 aa20.09■□□□□ 0.81
GATC-201ENST00000229384 GOLGB1Q14789 3259 aaKnown RBP20.09■□□□□ 0.81
GATC-201ENST00000229384 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.81
GATC-201ENST00000229384 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
GATC-201ENST00000229384 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.81
GATC-201ENST00000229384 SLC39A6Q13433 755 aa20.08■□□□□ 0.81
GATC-201ENST00000229384 ZNF784Q8NCA9 323 aaPredicted RBP20.08■□□□□ 0.81
GATC-201ENST00000229384 INTS5Q6P9B9 1019 aaKnown RBP20.07■□□□□ 0.8
GATC-201ENST00000229384 N4BP2Q86UW6 1770 aaPredicted RBP20.06■□□□□ 0.8
GATC-201ENST00000229384 MMP10P09238 476 aa20.06■□□□□ 0.8
GATC-201ENST00000229384 GYS1P13807 737 aa20.06■□□□□ 0.8
GATC-201ENST00000229384 DNAJC10Q8IXB1 793 aa20.06■□□□□ 0.8
GATC-201ENST00000229384 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
GATC-201ENST00000229384 IL17REQ8NFR9 667 aa20.06■□□□□ 0.8
GATC-201ENST00000229384 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
GATC-201ENST00000229384 PHACTR3Q96KR7 559 aa20.05■□□□□ 0.8
GATC-201ENST00000229384 NLGN1Q8N2Q7 840 aa20.04■□□□□ 0.8
GATC-201ENST00000229384 BRCA1P38398 1863 aaKnown RBP20.04■□□□□ 0.8
GATC-201ENST00000229384 CYP19A1P11511 503 aaPredicted RBP20.03■□□□□ 0.8
GATC-201ENST00000229384 RFC4P35249 363 aa20.03■□□□□ 0.8
GATC-201ENST00000229384 GRIN3BO60391 1043 aa20.02■□□□□ 0.8
GATC-201ENST00000229384 GAS2L2Q8NHY3 880 aa20.02■□□□□ 0.8
GATC-201ENST00000229384 CFAP53Q96M91 514 aa20.02■□□□□ 0.8
GATC-201ENST00000229384 SRP68Q9UHB9 627 aaKnown RBP20.02■□□□□ 0.8
GATC-201ENST00000229384 CEMIPQ8WUJ3 1361 aa20.01■□□□□ 0.79
GATC-201ENST00000229384 GNAT3A8MTJ3 354 aa20.01■□□□□ 0.79
GATC-201ENST00000229384 PRKAR2BP31323 418 aa20.01■□□□□ 0.79
GATC-201ENST00000229384 C10orf71Q711Q0 1435 aa20.01■□□□□ 0.79
GATC-201ENST00000229384 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
GATC-201ENST00000229384 USP42Q9H9J4 1324 aaKnown RBP20.01■□□□□ 0.79
GATC-201ENST00000229384 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
GATC-201ENST00000229384 CCDC87Q9NVE4 849 aa20■□□□□ 0.79
GATC-201ENST00000229384 DLG5Q8TDM6 1919 aa20■□□□□ 0.79
GATC-201ENST00000229384 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
GATC-201ENST00000229384 FKBP8Q14318 412 aa19.99■□□□□ 0.79
GATC-201ENST00000229384 AFDNP55196 1824 aaKnown RBP19.99■□□□□ 0.79
GATC-201ENST00000229384 DDR1Q08345 913 aa19.97■□□□□ 0.79
GATC-201ENST00000229384 ZNF496Q96IT1 587 aaPredicted RBP19.97■□□□□ 0.79
GATC-201ENST00000229384 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
GATC-201ENST00000229384 ZBTB1Q9Y2K1 713 aa19.97■□□□□ 0.79
GATC-201ENST00000229384 FCHSD2O94868 740 aa19.96■□□□□ 0.79
GATC-201ENST00000229384 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
GATC-201ENST00000229384 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
GATC-201ENST00000229384 ZNF790Q6PG37 636 aa19.96■□□□□ 0.79
GATC-201ENST00000229384 WWC3Q9ULE0 1092 aa19.96■□□□□ 0.79
GATC-201ENST00000229384 TM4SF1P30408 202 aa19.95■□□□□ 0.78
GATC-201ENST00000229384 TGFB2P61812 414 aa19.95■□□□□ 0.78
GATC-201ENST00000229384 NRXN2Q9P2S2 1712 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms