RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 AIMP1Q12904 312 aaKnown RBP13.87□□□□□ -0.19
CCND1-201ENST00000227507 KCNJ4P48050 445 aa13.87□□□□□ -0.19
CCND1-201ENST00000227507 HSP90AB2PQ58FF8 381 aa13.87□□□□□ -0.19
CCND1-201ENST00000227507 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
CCND1-201ENST00000227507 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
CCND1-201ENST00000227507 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
CCND1-201ENST00000227507 LRSAM1Q6UWE0 723 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 ANO2Q9NQ90 1003 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 HDGFL1Q5TGJ6 251 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCND1-201ENST00000227507 REC8O95072 547 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 ZNF445P59923 1031 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 AGLP35573 1532 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 CABLES1Q8TDN4 633 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 CFAP44Q96MT7 982 aa13.86□□□□□ -0.19
CCND1-201ENST00000227507 MBD3O95983 291 aa13.85□□□□□ -0.19
CCND1-201ENST00000227507 GCP02774 474 aa13.85□□□□□ -0.19
CCND1-201ENST00000227507 CCDC27Q2M243 656 aa13.85□□□□□ -0.19
CCND1-201ENST00000227507 TMEM94Q12767 1356 aa13.85□□□□□ -0.19
CCND1-201ENST00000227507 SBNO2Q9Y2G9 1366 aa13.85□□□□□ -0.19
CCND1-201ENST00000227507 GPT2Q8TD30 523 aa13.85□□□□□ -0.19
CCND1-201ENST00000227507 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
CCND1-201ENST00000227507 A2ML1A8K2U0 1454 aa13.85□□□□□ -0.19
CCND1-201ENST00000227507 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
CCND1-201ENST00000227507 POLR3AO14802 1390 aaPredicted RBP13.85□□□□□ -0.19
CCND1-201ENST00000227507 PHF14O94880 888 aa13.84□□□□□ -0.19
CCND1-201ENST00000227507 CCDC94Q9BW85 323 aaPredicted RBP13.84□□□□□ -0.19
CCND1-201ENST00000227507 UPF3BQ9BZI7 483 aaKnown RBP13.84□□□□□ -0.19
CCND1-201ENST00000227507 PLEKHG3A1L390 1219 aa13.84□□□□□ -0.19
CCND1-201ENST00000227507 ZNF500O60304 480 aaPredicted RBP13.84□□□□□ -0.19
CCND1-201ENST00000227507 MCCP23508 829 aa13.84□□□□□ -0.19
CCND1-201ENST00000227507 GPATCH3Q96I76 525 aa13.84□□□□□ -0.19
CCND1-201ENST00000227507 KIF2CQ99661 725 aa13.84□□□□□ -0.19
CCND1-201ENST00000227507 BTBD11A6QL63 1104 aa13.84□□□□□ -0.19
CCND1-201ENST00000227507 SF3B2Q13435 895 aaKnown RBP13.84□□□□□ -0.19
CCND1-201ENST00000227507 ZNF592Q92610 1267 aa13.84□□□□□ -0.19
CCND1-201ENST00000227507 ARHGEF40Q8TER5 1519 aa13.84□□□□□ -0.19
CCND1-201ENST00000227507 RNF17Q9BXT8 1623 aaKnown RBP13.84□□□□□ -0.19
CCND1-201ENST00000227507 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.19
CCND1-201ENST00000227507 HS1BP3Q53T59 392 aa13.83□□□□□ -0.19
CCND1-201ENST00000227507 OTUD7AQ8TE49 926 aaPredicted RBP13.83□□□□□ -0.19
CCND1-201ENST00000227507 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.19
CCND1-201ENST00000227507 POLKQ9UBT6 870 aa13.83□□□□□ -0.19
CCND1-201ENST00000227507 PIK3R4Q99570 1358 aa13.83□□□□□ -0.19
CCND1-201ENST00000227507 ABCA6Q8N139 1617 aa13.83□□□□□ -0.19
CCND1-201ENST00000227507 EXOC5O00471 708 aa13.83□□□□□ -0.2
CCND1-201ENST00000227507 HMGN5P82970 282 aaKnown RBP13.83□□□□□ -0.2
CCND1-201ENST00000227507 PDCL2Q8N4E4 241 aa13.83□□□□□ -0.2
CCND1-201ENST00000227507 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
CCND1-201ENST00000227507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
CCND1-201ENST00000227507 DTNBO60941 627 aa13.83□□□□□ -0.2
CCND1-201ENST00000227507 EDC4Q6P2E9 1401 aaKnown RBP13.83□□□□□ -0.2
CCND1-201ENST00000227507 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
CCND1-201ENST00000227507 LARP6Q9BRS8 491 aaKnown RBP13.83□□□□□ -0.2
CCND1-201ENST00000227507 FLT4P35916 1363 aa13.82□□□□□ -0.2
CCND1-201ENST00000227507 MCM10Q7L590 875 aa13.82□□□□□ -0.2
CCND1-201ENST00000227507 LMTK2Q8IWU2 1503 aa13.82□□□□□ -0.2
CCND1-201ENST00000227507 NOLC1Q14978 699 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCND1-201ENST00000227507 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
CCND1-201ENST00000227507 FIBPO43427 364 aa13.82□□□□□ -0.2
CCND1-201ENST00000227507 TERF1P54274 439 aa13.82□□□□□ -0.2
CCND1-201ENST00000227507 CGNQ9P2M7 1197 aaKnown RBP13.81□□□□□ -0.2
CCND1-201ENST00000227507 HCLS1P14317 486 aaPredicted RBP13.81□□□□□ -0.2
CCND1-201ENST00000227507 DMTNQ08495 405 aa13.81□□□□□ -0.2
CCND1-201ENST00000227507 TSPYL6Q8N831 410 aa13.81□□□□□ -0.2
CCND1-201ENST00000227507 DDIT3P35638 169 aa13.81□□□□□ -0.2
CCND1-201ENST00000227507 ADCY5O95622 1261 aa13.81□□□□□ -0.2
CCND1-201ENST00000227507 MCM5P33992 734 aa13.81□□□□□ -0.2
CCND1-201ENST00000227507 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
CCND1-201ENST00000227507 CLTCL1P53675 1640 aa13.8□□□□□ -0.2
CCND1-201ENST00000227507 CEP152O94986 1710 aa13.8□□□□□ -0.2
CCND1-201ENST00000227507 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
CCND1-201ENST00000227507 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
CCND1-201ENST00000227507 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
CCND1-201ENST00000227507 ROBO2Q9HCK4 1378 aa13.8□□□□□ -0.2
CCND1-201ENST00000227507 SPHKAPQ2M3C7 1700 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 SDSP20132 328 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
CCND1-201ENST00000227507 MPRIPQ6WCQ1 1025 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 G3V3G9 751 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 DCAF8Q5TAQ9 597 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 MAP3K19Q56UN5 1328 aa13.79□□□□□ -0.2
CCND1-201ENST00000227507 EIF4A2Q14240 407 aaKnown RBP13.79□□□□□ -0.2
CCND1-201ENST00000227507 ZBTB7BO15156 539 aaPredicted RBP13.78□□□□□ -0.2
CCND1-201ENST00000227507 GSPT1P15170 499 aaKnown RBP13.78□□□□□ -0.2
CCND1-201ENST00000227507 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
CCND1-201ENST00000227507 USP26Q9BXU7 913 aa13.78□□□□□ -0.2
CCND1-201ENST00000227507 IFT57Q9NWB7 429 aa13.78□□□□□ -0.2
CCND1-201ENST00000227507 ERC2O15083 957 aa13.78□□□□□ -0.2
CCND1-201ENST00000227507 PLEKHM2Q8IWE5 1019 aa13.78□□□□□ -0.2
CCND1-201ENST00000227507 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
CCND1-201ENST00000227507 NPC1L1Q9UHC9 1359 aa13.78□□□□□ -0.2
CCND1-201ENST00000227507 CLTCQ00610 1675 aaKnown RBP13.78□□□□□ -0.2
CCND1-201ENST00000227507 ARHGEF10O15013 1369 aa13.77□□□□□ -0.2
CCND1-201ENST00000227507 MAP3K4Q9Y6R4 1608 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms