RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
SF1-201ENST00000227503 AKAP12Q02952 1782 aa17.18■□□□□ 0.34
SF1-201ENST00000227503 TSPOAP1O95153 1857 aa17.17■□□□□ 0.34
SF1-201ENST00000227503 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
SF1-201ENST00000227503 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
SF1-201ENST00000227503 MCM5P33992 734 aa17.17■□□□□ 0.34
SF1-201ENST00000227503 PLCB2Q00722 1185 aa17.17■□□□□ 0.34
SF1-201ENST00000227503 PLEKHM2Q8IWE5 1019 aa17.17■□□□□ 0.34
SF1-201ENST00000227503 SMARCA5O60264 1052 aaPredicted RBP17.17■□□□□ 0.34
SF1-201ENST00000227503 UTP14CQ5TAP6 766 aaKnown RBP17.17■□□□□ 0.34
SF1-201ENST00000227503 GADD45BO75293 160 aaPredicted RBP17.16■□□□□ 0.34
SF1-201ENST00000227503 TSPY26PQ9H489 355 aa17.16■□□□□ 0.34
SF1-201ENST00000227503 NRKQ7Z2Y5 1582 aa17.16■□□□□ 0.34
SF1-201ENST00000227503 NOLC1Q14978 699 aaKnown RBP eCLIP17.15■□□□□ 0.34
SF1-201ENST00000227503 ZBTB22O15209 634 aa17.15■□□□□ 0.34
SF1-201ENST00000227503 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.343e-8■■■■■ 38.7
SF1-201ENST00000227503 BCL2L12Q9HB09 334 aa17.15■□□□□ 0.34
SF1-201ENST00000227503 AEBP1Q8IUX7 1158 aa17.14■□□□□ 0.34
SF1-201ENST00000227503 TCHHQ07283 1943 aa17.14■□□□□ 0.33
SF1-201ENST00000227503 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
SF1-201ENST00000227503 DTNBO60941 627 aa17.14■□□□□ 0.33
SF1-201ENST00000227503 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
SF1-201ENST00000227503 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
SF1-201ENST00000227503 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
SF1-201ENST00000227503 RGS12O14924 1447 aa17.13■□□□□ 0.33
SF1-201ENST00000227503 ST18O60284 1047 aa17.12■□□□□ 0.33
SF1-201ENST00000227503 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
SF1-201ENST00000227503 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
SF1-201ENST00000227503 ROBO2Q9HCK4 1378 aa17.12■□□□□ 0.33
SF1-201ENST00000227503 CHL1O00533 1208 aa17.11■□□□□ 0.33
SF1-201ENST00000227503 SDSP20132 328 aa17.11■□□□□ 0.33
SF1-201ENST00000227503 GTF2E1P29083 439 aaPredicted RBP17.11■□□□□ 0.33
SF1-201ENST00000227503 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
SF1-201ENST00000227503 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
SF1-201ENST00000227503 NEK4P51957 841 aa17.11■□□□□ 0.33
SF1-201ENST00000227503 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
SF1-201ENST00000227503 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
SF1-201ENST00000227503 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
SF1-201ENST00000227503 VGLL3A8MV65 326 aa17.1■□□□□ 0.33
SF1-201ENST00000227503 ADCY5O95622 1261 aa17.1■□□□□ 0.33
SF1-201ENST00000227503 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
SF1-201ENST00000227503 TSHZ3Q63HK5 1081 aa17.1■□□□□ 0.33
SF1-201ENST00000227503 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
SF1-201ENST00000227503 OVOS2A0A0J9YW53 1432 aa17.09■□□□□ 0.33
SF1-201ENST00000227503 OVOS2Q6IE36 1432 aa17.09■□□□□ 0.33
SF1-201ENST00000227503 HCLS1P14317 486 aaPredicted RBP17.09■□□□□ 0.33
SF1-201ENST00000227503 HDGFP51858 240 aaKnown RBP17.09■□□□□ 0.33
SF1-201ENST00000227503 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
SF1-201ENST00000227503 ANKRD44Q8N8A2 993 aa17.09■□□□□ 0.33
SF1-201ENST00000227503 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
SF1-201ENST00000227503 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
SF1-201ENST00000227503 MCM10Q7L590 875 aa17.08■□□□□ 0.32
SF1-201ENST00000227503 TMEM2Q9UHN6 1383 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 CGNQ9P2M7 1197 aaKnown RBP17.07■□□□□ 0.32
SF1-201ENST00000227503 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 ACEP12821 1306 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 RIOK3O14730 519 aaKnown RBP17.07■□□□□ 0.32
SF1-201ENST00000227503 SPC24Q8NBT2 197 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 MBD3O95983 291 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
SF1-201ENST00000227503 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 PRIMPOLQ96LW4 560 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 PYCARDQ9ULZ3 195 aa17.07■□□□□ 0.32
SF1-201ENST00000227503 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
SF1-201ENST00000227503 TNRQ92752 1358 aa17.06■□□□□ 0.32
SF1-201ENST00000227503 RGPD1P0DJD0 1748 aa17.06■□□□□ 0.32
SF1-201ENST00000227503 TOPAZ1Q8N9V7 1692 aa17.06■□□□□ 0.32
SF1-201ENST00000227503 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
SF1-201ENST00000227503 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
SF1-201ENST00000227503 GTPBP4Q9BZE4 634 aaKnown RBP17.06■□□□□ 0.32
SF1-201ENST00000227503 HMGN5P82970 282 aaKnown RBP17.06■□□□□ 0.32
SF1-201ENST00000227503 CRB1P82279 1406 aa17.05■□□□□ 0.32
SF1-201ENST00000227503 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
SF1-201ENST00000227503 PTPRCP08575 1304 aa17.05■□□□□ 0.32
SF1-201ENST00000227503 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
SF1-201ENST00000227503 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
SF1-201ENST00000227503 USP6P35125 1406 aa17.05■□□□□ 0.32
SF1-201ENST00000227503 MSH6P52701 1360 aa17.05■□□□□ 0.32
SF1-201ENST00000227503 USP31Q70CQ4 1352 aa17.05■□□□□ 0.32
SF1-201ENST00000227503 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
SF1-201ENST00000227503 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
SF1-201ENST00000227503 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
SF1-201ENST00000227503 NAA30Q147X3 362 aaPredicted RBP17.04■□□□□ 0.32
SF1-201ENST00000227503 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
SF1-201ENST00000227503 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
SF1-201ENST00000227503 BRD1O95696 1058 aa17.03■□□□□ 0.32
SF1-201ENST00000227503 PDE4CQ08493 712 aa17.03■□□□□ 0.32
SF1-201ENST00000227503 AP5Z1O43299 807 aa17.03■□□□□ 0.32
SF1-201ENST00000227503 GTF2F1P35269 517 aaKnown RBP eCLIP17.03■□□□□ 0.32
SF1-201ENST00000227503 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
SF1-201ENST00000227503 MEIS3Q99687 375 aa17.03■□□□□ 0.32
SF1-201ENST00000227503 LARP6Q9BRS8 491 aaKnown RBP17.03■□□□□ 0.32
SF1-201ENST00000227503 KIF20AO95235 890 aa17.03■□□□□ 0.32
SF1-201ENST00000227503 SSH2Q76I76 1423 aa17.02■□□□□ 0.32
SF1-201ENST00000227503 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.32
SF1-201ENST00000227503 NUTM2FA1L443 756 aa17.02■□□□□ 0.31
SF1-201ENST00000227503 KCNF1Q9H3M0 494 aa17.02■□□□□ 0.31
SF1-201ENST00000227503 SLC4A2P04920 1241 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms