RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 MCM10Q7L590 875 aa19.42■□□□□ 0.7
PCOLCE-201ENST00000223061 TEFQ10587 303 aa19.42■□□□□ 0.7
PCOLCE-201ENST00000223061 DCTN1Q14203 1278 aa19.42■□□□□ 0.7
PCOLCE-201ENST00000223061 R3HDM1Q15032 1099 aaKnown RBP19.42■□□□□ 0.7
PCOLCE-201ENST00000223061 RUNDC1Q96C34 613 aa19.42■□□□□ 0.7
PCOLCE-201ENST00000223061 ANO8Q9HCE9 1232 aaPredicted RBP19.42■□□□□ 0.7
PCOLCE-201ENST00000223061 SCN11AQ9UI33 1791 aa19.41■□□□□ 0.7
PCOLCE-201ENST00000223061 MRC1P22897 1456 aa19.4■□□□□ 0.7
PCOLCE-201ENST00000223061 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
PCOLCE-201ENST00000223061 LOC102724428A0A0B4J2F2 783 aa19.39■□□□□ 0.7
PCOLCE-201ENST00000223061 SIK1P57059 783 aa19.39■□□□□ 0.7
PCOLCE-201ENST00000223061 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.7
PCOLCE-201ENST00000223061 PNISRQ8TF01 805 aaKnown RBP19.39■□□□□ 0.7
PCOLCE-201ENST00000223061 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.7
PCOLCE-201ENST00000223061 ADAMTS7Q9UKP4 1686 aa19.39■□□□□ 0.7
PCOLCE-201ENST00000223061 CEMIPQ8WUJ3 1361 aa19.39■□□□□ 0.69
PCOLCE-201ENST00000223061 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
PCOLCE-201ENST00000223061 STK32BQ9NY57 414 aa19.39■□□□□ 0.69
PCOLCE-201ENST00000223061 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
PCOLCE-201ENST00000223061 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
PCOLCE-201ENST00000223061 RIPK4P57078 832 aa19.38■□□□□ 0.69
PCOLCE-201ENST00000223061 SLC39A6Q13433 755 aa19.38■□□□□ 0.69
PCOLCE-201ENST00000223061 NEUROD2Q15784 382 aa19.38■□□□□ 0.69
PCOLCE-201ENST00000223061 LY75O60449 1722 aa19.38■□□□□ 0.69
PCOLCE-201ENST00000223061 ATP6V1AP38606 617 aa19.37■□□□□ 0.69
PCOLCE-201ENST00000223061 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
PCOLCE-201ENST00000223061 ZNF827Q17R98 1081 aa19.36■□□□□ 0.69
PCOLCE-201ENST00000223061 SLC15A2Q16348 729 aa19.35■□□□□ 0.69
PCOLCE-201ENST00000223061 ITPK1Q13572 414 aa19.34■□□□□ 0.69
PCOLCE-201ENST00000223061 SLC4A9Q96Q91 983 aa19.34■□□□□ 0.69
PCOLCE-201ENST00000223061 PAPPAQ13219 1627 aa19.34■□□□□ 0.69
PCOLCE-201ENST00000223061 BTBD11A6QL63 1104 aa19.34■□□□□ 0.69
PCOLCE-201ENST00000223061 APAF1O14727 1248 aa19.34■□□□□ 0.69
PCOLCE-201ENST00000223061 FAM9BQ8IZU0 186 aa19.34■□□□□ 0.69
PCOLCE-201ENST00000223061 TTC5Q8N0Z6 440 aa19.34■□□□□ 0.69
PCOLCE-201ENST00000223061 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
PCOLCE-201ENST00000223061 LINC00116Q8NCU8 138 aa19.33■□□□□ 0.68
PCOLCE-201ENST00000223061 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
PCOLCE-201ENST00000223061 LMOD3Q0VAK6 560 aa19.32■□□□□ 0.68
PCOLCE-201ENST00000223061 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
PCOLCE-201ENST00000223061 ZNF790Q6PG37 636 aa19.31■□□□□ 0.68
PCOLCE-201ENST00000223061 TFCP2L1Q9NZI6 479 aa19.31■□□□□ 0.68
PCOLCE-201ENST00000223061 TAF7Q15545 349 aaPredicted RBP19.31■□□□□ 0.68
PCOLCE-201ENST00000223061 MIS18AQ9NYP9 233 aa19.31■□□□□ 0.68
PCOLCE-201ENST00000223061 KCNQ3O43525 872 aa19.3■□□□□ 0.68
PCOLCE-201ENST00000223061 PDGFDQ9GZP0 370 aaPredicted RBP19.3■□□□□ 0.68
PCOLCE-201ENST00000223061 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
PCOLCE-201ENST00000223061 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
PCOLCE-201ENST00000223061 KCPQ6ZWJ8 1503 aa19.29■□□□□ 0.68
PCOLCE-201ENST00000223061 C5P01031 1676 aa19.29■□□□□ 0.68
PCOLCE-201ENST00000223061 HMGB2P26583 209 aaKnown RBP19.29■□□□□ 0.68
PCOLCE-201ENST00000223061 AK7Q96M32 723 aa19.29■□□□□ 0.68
PCOLCE-201ENST00000223061 ZNF496Q96IT1 587 aaPredicted RBP19.28■□□□□ 0.68
PCOLCE-201ENST00000223061 SIPA1L3O60292 1781 aaPredicted RBP19.28■□□□□ 0.68
PCOLCE-201ENST00000223061 CCER2I3L3R5 266 aa19.28■□□□□ 0.68
PCOLCE-201ENST00000223061 DNAJC10Q8IXB1 793 aa19.28■□□□□ 0.68
PCOLCE-201ENST00000223061 MIER1Q8N108 512 aa19.28■□□□□ 0.68
PCOLCE-201ENST00000223061 C4BP0C0L5 1744 aa19.26■□□□□ 0.67
PCOLCE-201ENST00000223061 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
PCOLCE-201ENST00000223061 PNPLA7Q6ZV29 1317 aa19.26■□□□□ 0.67
PCOLCE-201ENST00000223061 GNPATO15228 680 aa19.25■□□□□ 0.67
PCOLCE-201ENST00000223061 SMIM5Q71RC9 77 aa19.25■□□□□ 0.67
PCOLCE-201ENST00000223061 PHF14O94880 888 aa19.25■□□□□ 0.67
PCOLCE-201ENST00000223061 VSIG10Q8N0Z9 540 aa19.25■□□□□ 0.67
PCOLCE-201ENST00000223061 HEG1Q9ULI3 1381 aa19.25■□□□□ 0.67
PCOLCE-201ENST00000223061 TAF1LQ8IZX4 1826 aa19.24■□□□□ 0.67
PCOLCE-201ENST00000223061 MSH5O43196 834 aa19.24■□□□□ 0.67
PCOLCE-201ENST00000223061 AMIGO3Q86WK7 504 aa19.24■□□□□ 0.67
PCOLCE-201ENST00000223061 TSPYL4Q9UJ04 414 aa19.24■□□□□ 0.67
PCOLCE-201ENST00000223061 LAS1LQ9Y4W2 734 aaKnown RBP19.24■□□□□ 0.67
PCOLCE-201ENST00000223061 ZBTB7AO95365 584 aa19.23■□□□□ 0.67
PCOLCE-201ENST00000223061 CRKLP46109 303 aaKnown RBP19.23■□□□□ 0.67
PCOLCE-201ENST00000223061 CNTNAP4Q9C0A0 1308 aa19.23■□□□□ 0.67
PCOLCE-201ENST00000223061 ZNF831Q5JPB2 1677 aa19.23■□□□□ 0.67
PCOLCE-201ENST00000223061 TJP1Q07157 1748 aa19.22■□□□□ 0.67
PCOLCE-201ENST00000223061 UBR2Q8IWV8 1755 aa19.22■□□□□ 0.67
PCOLCE-201ENST00000223061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.22■□□□□ 0.67
PCOLCE-201ENST00000223061 CYP19A1P11511 503 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-201ENST00000223061 RC3H1Q5TC82 1133 aaKnown RBP19.22■□□□□ 0.67
PCOLCE-201ENST00000223061 COL23A1Q86Y22 540 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-201ENST00000223061 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-201ENST00000223061 INTS5Q6P9B9 1019 aaKnown RBP19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 CCDC87Q9NVE4 849 aa19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 RTCBQ9Y3I0 505 aaKnown RBP19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 SRCAPQ6ZRS2 3230 aa19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 PRAMEF22A3QJZ6 481 aa19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 STARD3NLO95772 234 aa19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 SNRPA1P09661 255 aaKnown RBP19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 FLAD1Q8NFF5 587 aa19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 TEX13AQ9BXU3 409 aaPredicted RBP19.2■□□□□ 0.66
PCOLCE-201ENST00000223061 CASZ1Q86V15 1759 aa19.19■□□□□ 0.66
PCOLCE-201ENST00000223061 COL5A3P25940 1745 aaPredicted RBP19.19■□□□□ 0.66
PCOLCE-201ENST00000223061 SSFA2P28290 1259 aa19.19■□□□□ 0.66
PCOLCE-201ENST00000223061 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
PCOLCE-201ENST00000223061 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
PCOLCE-201ENST00000223061 CICQ96RK0 1608 aaPredicted RBP19.18■□□□□ 0.66
PCOLCE-201ENST00000223061 TUBGCP6Q96RT7 1819 aa19.18■□□□□ 0.66
PCOLCE-201ENST00000223061 RPS6KA4O75676 772 aa19.18■□□□□ 0.66
PCOLCE-201ENST00000223061 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
PCOLCE-201ENST00000223061 CHL1O00533 1208 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms