RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
SNU13-201ENST00000215956 TATP17735 454 aaPredicted RBP16.14■□□□□ 0.17
SNU13-201ENST00000215956 AK7Q96M32 723 aa16.14■□□□□ 0.17
SNU13-201ENST00000215956 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
SNU13-201ENST00000215956 PKD1L3Q7Z443 1732 aa16.13■□□□□ 0.17
SNU13-201ENST00000215956 MPRIPQ6WCQ1 1025 aa16.13■□□□□ 0.17
SNU13-201ENST00000215956 AMIGO3Q86WK7 504 aa16.13■□□□□ 0.17
SNU13-201ENST00000215956 CICQ96RK0 1608 aaPredicted RBP16.13■□□□□ 0.17
SNU13-201ENST00000215956 MAP2P11137 1827 aaKnown RBP16.13■□□□□ 0.17
SNU13-201ENST00000215956 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
SNU13-201ENST00000215956 FYB1O15117 783 aa16.12■□□□□ 0.17
SNU13-201ENST00000215956 PHF14O94880 888 aa16.12■□□□□ 0.17
SNU13-201ENST00000215956 KIF3CO14782 793 aa16.11■□□□□ 0.17
SNU13-201ENST00000215956 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
SNU13-201ENST00000215956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.1■□□□□ 0.17
SNU13-201ENST00000215956 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
SNU13-201ENST00000215956 KIF13BQ9NQT8 1826 aa16.09■□□□□ 0.17
SNU13-201ENST00000215956 CYP27B1O15528 508 aa16.09■□□□□ 0.17
SNU13-201ENST00000215956 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
SNU13-201ENST00000215956 GGNBP2Q9H3C7 697 aa16.09■□□□□ 0.17
SNU13-201ENST00000215956 NUDCQ9Y266 331 aa16.09■□□□□ 0.17
SNU13-201ENST00000215956 SSFA2P28290 1259 aa16.08■□□□□ 0.17
SNU13-201ENST00000215956 MTHFSP49914 203 aa16.08■□□□□ 0.17
SNU13-201ENST00000215956 HSP90AB2PQ58FF8 381 aa16.08■□□□□ 0.17
SNU13-201ENST00000215956 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.16
SNU13-201ENST00000215956 FLT4P35916 1363 aa16.08■□□□□ 0.16
SNU13-201ENST00000215956 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.16
SNU13-201ENST00000215956 N4BP2Q86UW6 1770 aaPredicted RBP16.07■□□□□ 0.16
SNU13-201ENST00000215956 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
SNU13-201ENST00000215956 KIF24Q5T7B8 1368 aa16.06■□□□□ 0.16
SNU13-201ENST00000215956 APLP1P51693 650 aa16.06■□□□□ 0.16
SNU13-201ENST00000215956 PIGBQ92521 554 aa16.06■□□□□ 0.16
SNU13-201ENST00000215956 LOC102724428A0A0B4J2F2 783 aa16.05■□□□□ 0.16
SNU13-201ENST00000215956 SIK1P57059 783 aa16.05■□□□□ 0.16
SNU13-201ENST00000215956 LINC00116Q8NCU8 138 aa16.05■□□□□ 0.16
SNU13-201ENST00000215956 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
SNU13-201ENST00000215956 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
SNU13-201ENST00000215956 NCAPD2Q15021 1401 aa16.03■□□□□ 0.16
SNU13-201ENST00000215956 BRCA1P38398 1863 aaKnown RBP16.03■□□□□ 0.16
SNU13-201ENST00000215956 GNPATO15228 680 aa16.03■□□□□ 0.16
SNU13-201ENST00000215956 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
SNU13-201ENST00000215956 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
SNU13-201ENST00000215956 WDR90Q96KV7 1748 aa16.03■□□□□ 0.16
SNU13-201ENST00000215956 MMP10P09238 476 aa16.02■□□□□ 0.16
SNU13-201ENST00000215956 TOMM70O94826 608 aa16.01■□□□□ 0.15
SNU13-201ENST00000215956 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
SNU13-201ENST00000215956 ITPK1Q13572 414 aa16.01■□□□□ 0.15
SNU13-201ENST00000215956 RUNDC1Q96C34 613 aa16.01■□□□□ 0.15
SNU13-201ENST00000215956 TMOD3Q9NYL9 352 aa16.01■□□□□ 0.15
SNU13-201ENST00000215956 SPG7Q9UQ90 795 aa16.01■□□□□ 0.15
SNU13-201ENST00000215956 C10orf71Q711Q0 1435 aa16■□□□□ 0.15
SNU13-201ENST00000215956 ATP6V1AP38606 617 aa16■□□□□ 0.15
SNU13-201ENST00000215956 DNAJC5GQ8N7S2 189 aa16■□□□□ 0.15
SNU13-201ENST00000215956 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
SNU13-201ENST00000215956 BCS1LQ9Y276 419 aa16■□□□□ 0.15
SNU13-201ENST00000215956 PCNTO95613 3336 aa16■□□□□ 0.15
SNU13-201ENST00000215956 ARFGEF1Q9Y6D6 1849 aa16■□□□□ 0.15
SNU13-201ENST00000215956 DIAPH1O60610 1272 aaKnown RBP15.99■□□□□ 0.15
SNU13-201ENST00000215956 TGFB2P61812 414 aa15.99■□□□□ 0.15
SNU13-201ENST00000215956 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
SNU13-201ENST00000215956 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
SNU13-201ENST00000215956 COL5A3P25940 1745 aaPredicted RBP15.98■□□□□ 0.15
SNU13-201ENST00000215956 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
SNU13-201ENST00000215956 ZNF831Q5JPB2 1677 aa15.98■□□□□ 0.15
SNU13-201ENST00000215956 NMRK2Q9NPI5 230 aa15.97■□□□□ 0.15
SNU13-201ENST00000215956 A0A0G2JLW4 131 aa15.97■□□□□ 0.15
SNU13-201ENST00000215956 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
SNU13-201ENST00000215956 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNU13-201ENST00000215956 ARHGAP27Q6ZUM4 889 aa15.97■□□□□ 0.15
SNU13-201ENST00000215956 KDRP35968 1356 aa15.96■□□□□ 0.15
SNU13-201ENST00000215956 NEFMP07197 916 aa15.96■□□□□ 0.15
SNU13-201ENST00000215956 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
SNU13-201ENST00000215956 ATG3Q9NT62 314 aa15.96■□□□□ 0.15
SNU13-201ENST00000215956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.96■□□□□ 0.15
SNU13-201ENST00000215956 POLKQ9UBT6 870 aa15.96■□□□□ 0.15
SNU13-201ENST00000215956 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
SNU13-201ENST00000215956 PHKG2P15735 406 aa15.95■□□□□ 0.14
SNU13-201ENST00000215956 FKBP8Q14318 412 aa15.95■□□□□ 0.14
SNU13-201ENST00000215956 TRAPPC3LQ5T215 181 aa15.95■□□□□ 0.14
SNU13-201ENST00000215956 IFNL2Q8IZJ0 200 aa15.95■□□□□ 0.14
SNU13-201ENST00000215956 NLGN1Q8N2Q7 840 aa15.95■□□□□ 0.14
SNU13-201ENST00000215956 RTCBQ9Y3I0 505 aaKnown RBP15.95■□□□□ 0.14
SNU13-201ENST00000215956 SALL2Q9Y467 1007 aaPredicted RBP15.95■□□□□ 0.14
SNU13-201ENST00000215956 COL3A1P02461 1466 aaPredicted RBP15.95■□□□□ 0.14
SNU13-201ENST00000215956 APAF1O14727 1248 aa15.94■□□□□ 0.14
SNU13-201ENST00000215956 FCHSD2O94868 740 aa15.94■□□□□ 0.14
SNU13-201ENST00000215956 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
SNU13-201ENST00000215956 RBM46Q8TBY0 533 aaKnown RBP15.94■□□□□ 0.14
SNU13-201ENST00000215956 CCDC87Q9NVE4 849 aa15.94■□□□□ 0.14
SNU13-201ENST00000215956 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
SNU13-201ENST00000215956 MYH14Q7Z406 1995 aaKnown RBP15.94■□□□□ 0.14
SNU13-201ENST00000215956 U2SURPO15042 1029 aaKnown RBP15.94■□□□□ 0.14
SNU13-201ENST00000215956 DPEP1P16444 411 aa15.94■□□□□ 0.14
SNU13-201ENST00000215956 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
SNU13-201ENST00000215956 EYA1Q99502 592 aa15.94■□□□□ 0.14
SNU13-201ENST00000215956 ZNF521Q96K83 1311 aa15.93■□□□□ 0.14
SNU13-201ENST00000215956 MAPK8IP3Q9UPT6 1336 aa15.93■□□□□ 0.14
SNU13-201ENST00000215956 ADRA2BP18089 450 aa15.93■□□□□ 0.14
SNU13-201ENST00000215956 C16orf71Q8IYS4 520 aaPredicted RBP15.92■□□□□ 0.14
SNU13-201ENST00000215956 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms