RNA–Protein interactions for RNA: ENST00000172229.7

NGFR-201, Transcript of nerve growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NGFR, Length 3,417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGFR-201ENST00000172229 RRAGDQ9NQL2 400 aaPredicted RBP20.28■□□□□ 0.84
NGFR-201ENST00000172229 C9orf78Q9NZ63 289 aaPredicted RBP20.28■□□□□ 0.84
NGFR-201ENST00000172229 RBM27Q9P2N5 1060 aaKnown RBP20.28■□□□□ 0.84
NGFR-201ENST00000172229 USP6P35125 1406 aa20.27■□□□□ 0.84
NGFR-201ENST00000172229 MX1P20591 662 aa20.27■□□□□ 0.84
NGFR-201ENST00000172229 PIK3R4Q99570 1358 aa20.27■□□□□ 0.84
NGFR-201ENST00000172229 RABEP1Q15276 862 aa20.27■□□□□ 0.84
NGFR-201ENST00000172229 GRPEL1Q9HAV7 217 aa20.27■□□□□ 0.84
NGFR-201ENST00000172229 ZNF330Q9Y3S2 320 aaPredicted RBP20.27■□□□□ 0.84
NGFR-201ENST00000172229 FLT4P35916 1363 aa20.27■□□□□ 0.84
NGFR-201ENST00000172229 CDK12Q9NYV4 1490 aaPredicted RBP20.27■□□□□ 0.83
NGFR-201ENST00000172229 MYL6BP14649 208 aa20.27■□□□□ 0.83
NGFR-201ENST00000172229 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.83
NGFR-201ENST00000172229 PRAMEF22A3QJZ6 481 aa20.26■□□□□ 0.83
NGFR-201ENST00000172229 GAS2L3Q86XJ1 694 aa20.26■□□□□ 0.83
NGFR-201ENST00000172229 RNF214Q8ND24 703 aa20.26■□□□□ 0.83
NGFR-201ENST00000172229 PTPRCP08575 1304 aa20.26■□□□□ 0.83
NGFR-201ENST00000172229 GNAI3P08754 354 aa20.26■□□□□ 0.83
NGFR-201ENST00000172229 KCNJ4P48050 445 aa20.25■□□□□ 0.83
NGFR-201ENST00000172229 BTBD11A6QL63 1104 aa20.25■□□□□ 0.83
NGFR-201ENST00000172229 NBPF7P0C2Y1 421 aaPredicted RBP20.25■□□□□ 0.83
NGFR-201ENST00000172229 SLC39A6Q13433 755 aa20.25■□□□□ 0.83
NGFR-201ENST00000172229 PTCH1Q13635 1447 aa20.25■□□□□ 0.83
NGFR-201ENST00000172229 C1orf141Q5JVX7 400 aa20.25■□□□□ 0.83
NGFR-201ENST00000172229 SRCIN1Q9C0H9 1055 aa20.25■□□□□ 0.83
NGFR-201ENST00000172229 NLRP2Q9NX02 1062 aa20.25■□□□□ 0.83
NGFR-201ENST00000172229 PA2G4Q9UQ80 394 aaKnown RBP20.25■□□□□ 0.83
NGFR-201ENST00000172229 MED14O60244 1454 aa20.25■□□□□ 0.83
NGFR-201ENST00000172229 CWC27Q6UX04 472 aaKnown RBP20.24■□□□□ 0.83
NGFR-201ENST00000172229 ANP32BQ92688 251 aaKnown RBP20.24■□□□□ 0.83
NGFR-201ENST00000172229 A0A0G2JS52 829 aa20.24■□□□□ 0.83
NGFR-201ENST00000172229 BRPF1P55201 1214 aaPredicted RBP20.24■□□□□ 0.83
NGFR-201ENST00000172229 PALD1Q9ULE6 856 aa20.24■□□□□ 0.83
NGFR-201ENST00000172229 SPG7Q9UQ90 795 aa20.24■□□□□ 0.83
NGFR-201ENST00000172229 BAG4O95429 457 aaKnown RBP20.24■□□□□ 0.83
NGFR-201ENST00000172229 CPA1P15085 419 aa20.24■□□□□ 0.83
NGFR-201ENST00000172229 PLCB2Q00722 1185 aa20.24■□□□□ 0.83
NGFR-201ENST00000172229 USP32Q8NFA0 1604 aa20.23■□□□□ 0.83
NGFR-201ENST00000172229 SNX21Q969T3 373 aa20.23■□□□□ 0.83
NGFR-201ENST00000172229 PTPRUQ92729 1446 aa20.23■□□□□ 0.83
NGFR-201ENST00000172229 RIMBP3CA6NJZ7 1639 aa20.23■□□□□ 0.83
NGFR-201ENST00000172229 RIMBP3BA6NNM3 1639 aa20.23■□□□□ 0.83
NGFR-201ENST00000172229 RIMBP3Q9UFD9 1639 aa20.23■□□□□ 0.83
NGFR-201ENST00000172229 CWF19L2Q2TBE0 894 aaKnown RBP20.22■□□□□ 0.83
NGFR-201ENST00000172229 CABLES1Q8TDN4 633 aa20.22■□□□□ 0.83
NGFR-201ENST00000172229 MCCP23508 829 aa20.22■□□□□ 0.83
NGFR-201ENST00000172229 RAB3GAP1Q15042 981 aa20.22■□□□□ 0.83
NGFR-201ENST00000172229 ADAMTS13Q76LX8 1427 aa20.21■□□□□ 0.83
NGFR-201ENST00000172229 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
NGFR-201ENST00000172229 USP44Q9H0E7 712 aa20.2■□□□□ 0.82
NGFR-201ENST00000172229 CHMP3Q9Y3E7 222 aa20.2■□□□□ 0.82
NGFR-201ENST00000172229 DIP2BQ9P265 1576 aa20.19■□□□□ 0.82
NGFR-201ENST00000172229 SBNO1A3KN83 1393 aa20.19■□□□□ 0.82
NGFR-201ENST00000172229 MRE11P49959 708 aa20.19■□□□□ 0.82
NGFR-201ENST00000172229 KIAA1211Q6ZU35 1233 aa20.19■□□□□ 0.82
NGFR-201ENST00000172229 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
NGFR-201ENST00000172229 CHRNA2Q15822 529 aa20.18■□□□□ 0.82
NGFR-201ENST00000172229 PKNOX2Q96KN3 472 aa20.18■□□□□ 0.82
NGFR-201ENST00000172229 ANKLE2Q86XL3 938 aa20.18■□□□□ 0.82
NGFR-201ENST00000172229 KLHDC4Q8TBB5 520 aa20.18■□□□□ 0.82
NGFR-201ENST00000172229 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.17■□□□□ 0.82
NGFR-201ENST00000172229 PROSER3Q2NL68 480 aa20.17■□□□□ 0.82
NGFR-201ENST00000172229 ATP8B2P98198 1209 aa20.17■□□□□ 0.82
NGFR-201ENST00000172229 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
NGFR-201ENST00000172229 CCDC8Q9H0W5 538 aaPredicted RBP20.17■□□□□ 0.82
NGFR-201ENST00000172229 TMX3Q96JJ7 454 aa20.16■□□□□ 0.82
NGFR-201ENST00000172229 TCEANC2Q96MN5 208 aa20.16■□□□□ 0.82
NGFR-201ENST00000172229 IGSF1Q8N6C5 1336 aa20.16■□□□□ 0.82
NGFR-201ENST00000172229 DNAAF4Q8WXU2 420 aa20.15■□□□□ 0.82
NGFR-201ENST00000172229 ESYT1Q9BSJ8 1104 aa20.15■□□□□ 0.82
NGFR-201ENST00000172229 MAP3K2Q9Y2U5 619 aa20.15■□□□□ 0.82
NGFR-201ENST00000172229 IL25Q9H293 177 aa20.15■□□□□ 0.82
NGFR-201ENST00000172229 SIRT1Q96EB6 747 aa20.15■□□□□ 0.82
NGFR-201ENST00000172229 KIF20BQ96Q89 1820 aa20.15■□□□□ 0.82
NGFR-201ENST00000172229 NASPP49321 788 aaPredicted RBP20.14■□□□□ 0.82
NGFR-201ENST00000172229 DIAPH3Q9NSV4 1193 aa20.14■□□□□ 0.82
NGFR-201ENST00000172229 DLC1Q96QB1 1528 aa20.14■□□□□ 0.81
NGFR-201ENST00000172229 ATP10DQ9P241 1426 aa20.14■□□□□ 0.81
NGFR-201ENST00000172229 NUCB2P80303 420 aa20.14■□□□□ 0.81
NGFR-201ENST00000172229 RIC3Q7Z5B4 369 aa20.14■□□□□ 0.81
NGFR-201ENST00000172229 RHPN1Q8TCX5 695 aa20.14■□□□□ 0.81
NGFR-201ENST00000172229 CIZ1Q9ULV3 898 aaPredicted RBP20.14■□□□□ 0.81
NGFR-201ENST00000172229 MAP3K5Q99683 1374 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 PLEKHG1Q9ULL1 1385 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 CRB1P82279 1406 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 IFIT2P09913 472 aaKnown RBP20.13■□□□□ 0.81
NGFR-201ENST00000172229 NDUFB9Q9Y6M9 179 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 AK9Q5TCS8 1911 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 CHMLP26374 656 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 FAM43AQ8N2R8 423 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 ARID3AQ99856 593 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 SOS1Q07889 1333 aaPredicted RBP20.13■□□□□ 0.81
NGFR-201ENST00000172229 CDC42BPGQ6DT37 1551 aa20.13■□□□□ 0.81
NGFR-201ENST00000172229 SYCE3A1L190 88 aa20.12■□□□□ 0.81
NGFR-201ENST00000172229 PLEKHO1Q53GL0 409 aaPredicted RBP20.12■□□□□ 0.81
NGFR-201ENST00000172229 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
NGFR-201ENST00000172229 NAP1L2Q9ULW6 460 aaPredicted RBP20.12■□□□□ 0.81
NGFR-201ENST00000172229 OVOS2A0A0J9YW53 1432 aa20.12■□□□□ 0.81
NGFR-201ENST00000172229 OVOS2Q6IE36 1432 aa20.12■□□□□ 0.81
NGFR-201ENST00000172229 KIAA0232Q92628 1395 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms